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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0239200 |
| Transcript ID | LotjaGi2g1v0239200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GMP synthase [glutamine]-hydrolyzing]; TAIR: AT1G66860.1 Class I glutamine amidotransferase-like superfamily protein; Swiss-Prot: sp|P49865|NTPR_ENTHA Protein NtpR; TrEMBL-Plants: tr|A0A151TDA1|A0A151TDA1_CAJCA Putative glutamine amidotransferase-like protein RP404 family; Found in the gene: LotjaGi2g1v0239200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:70038867..70040819) extracted from Lotus japonicus Gifu genome v1.2.
CATCATTCTTCTTCTTCTCCAAACACATTACTCTCATTCATCACCACCACCACCACCACCATGTCTTCCGATCTCTCCGT CATTCTCCCCCGCGTCCTCATCGTTTCTCGCCGCACCGTTCGCAAAAACAAGTTCGTCGATTTCGTCGGTAAGTTCATCC ATTCCTTCACTCTCTCAATCTCAACCCAATTTCACAAAATCCAAACACGCCCTTATCCTCTGTTTTTCATGCATTTTCGT ACTTTTCGTTTTCAGGCGAGTACCACCTTGATCTCATCGTCAGCTACGGCGCCGTCCCCGTCATCGTCCCCCGCGTCTCC GGCGTCCACATGCTCCTCAGCAGCTTCGAGCCAATCCACGGCGTTCTCCTCTGCGAAGGCGAAGACATCGACCCCGTTTG GTACGAGCACGACAGCATGGCTTCCGGTCTCTCGCACGAAGAATTGGACGAAATCCGCCGCCTCCACGCCAGCGACACCG CCATTGACAAAGAGAAGGATTCAATCGAGCTAAGCCTCGCTAAGCTCTGCCTCGAACGGAACATTCCCTACATGGGTATT TGCAGAGGCTCTCAGGTTCTCAATGTTGCTTGTGGCGGTTCTTTGTATCAGGATATTGGGAAAGAGCTTTCTACCAAGGT GATGCATATCAACTATGATGATTATGATGGGCATAGGCATGGGGTGAAGGTTGTTGAGAATACTCCTCTGTTTCATTGGT TTAAGGATTCTTTGGAAGATGGGGAGATAGAGATAAAGGTTAATAGCTATCATCATCAGGGGGTTAAGCGATTGGCGCAA CGGTTTGTGCCAATGGCTTTTGCCCCTGATGGTTTGATTGAAGGATTTTATGACCCTGATGCTTATAATCCTGATGAGGG GAAGTTCATCATGGGGTTGCAGTTTCACCCTGAGAGAATGAGAAAGCCTGATTCTGAGGAATTTGATTATCCTGGATGCC CTTTTGCTTACAAGGTTTGTAAATTGATTGCTATGATTAAGAGAGTTTCATGATTTTGATTGAGCAAATGTTATGATGAT TAGTATAAAGTTTGATTATATGCCCCTATCAAATGTTTTATTTTAGGTGTATATGCATATGTTGAATTTGATTTGGTGGG AATTGATGTGCAGGAATTTGTGAAGGCAGTGGTTGCTTATCAAAAGAGGCTGAATAGTTTGACATCTGTGCCAAAGGCTT TGAGACTCAACAAGGAAATGGAGAACAAAAGGAAAATCATAGTGCGTAGCTTTTCACTTGCTAAGAACATGTACACCATG GGACGTGAGAAGTGTTCTTCCAAAGAGTCTGATCTTGAAGCTGGAGCTGAATTTCTTGAGGTAACAAATTGCACACTAAT CATTTAACTTTTCAGCATAAAGTTTTGTGACAGTTTCTAATAGGTTTCCTTTTTTCACTATCTAATCATAGTATTATTAT GACACTATGATGTATCTTAATTTGTATTGATGTGTATGTTTGAAATTGCAGTCAAATACAGCTTTGAGTGTGCAGCAAGA GAAACGGTTGAAGCAAATGGGAGCAACAGTTAGGAATGCAGGGTCATATGTTGAGAGGCTGAAGCTGAATGAGGAAAGAG AGAAGATGGCAAGGAATGTGATGGGGAAAATGTCGGTGGAGCAATTGTCTGACTTGCTTTCTTTCTACCACACTATGGGG CAGATTTGTTCTCAAGTGATGGAAAAGAAGATAGAGATAGTTGTGAATGACTTCAGCTCATGATTTTGTCTCCTTTCCCT GGTTTGTGGTGGTGACACCATGACATATTTGTTCCTTTTTTTGGTGTGTTTTGATAGTGGAACTCACATGAATCCTGGGT GGCCGGTGGGGGTGCCTTTTAGTGTACATGTTTTCATTTTTTCCTCCTCCTGTACTTTTGGACTTGTTATATGTCAATGT CTCTTTCTCTAACAAGCAAGAAAAACTGTTCCC
CDS sequence (LotjaGi2g1v0239200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTCCGATCTCTCCGTCATTCTCCCCCGCGTCCTCATCGTTTCTCGCCGCACCGTTCGCAAAAACAAGTTCGTCGA TTTCGTCGGCGAGTACCACCTTGATCTCATCGTCAGCTACGGCGCCGTCCCCGTCATCGTCCCCCGCGTCTCCGGCGTCC ACATGCTCCTCAGCAGCTTCGAGCCAATCCACGGCGTTCTCCTCTGCGAAGGCGAAGACATCGACCCCGTTTGGTACGAG CACGACAGCATGGCTTCCGGTCTCTCGCACGAAGAATTGGACGAAATCCGCCGCCTCCACGCCAGCGACACCGCCATTGA CAAAGAGAAGGATTCAATCGAGCTAAGCCTCGCTAAGCTCTGCCTCGAACGGAACATTCCCTACATGGGTATTTGCAGAG GCTCTCAGGTTCTCAATGTTGCTTGTGGCGGTTCTTTGTATCAGGATATTGGGAAAGAGCTTTCTACCAAGGTGATGCAT ATCAACTATGATGATTATGATGGGCATAGGCATGGGGTGAAGGTTGTTGAGAATACTCCTCTGTTTCATTGGTTTAAGGA TTCTTTGGAAGATGGGGAGATAGAGATAAAGGTTAATAGCTATCATCATCAGGGGGTTAAGCGATTGGCGCAACGGTTTG TGCCAATGGCTTTTGCCCCTGATGGTTTGATTGAAGGATTTTATGACCCTGATGCTTATAATCCTGATGAGGGGAAGTTC ATCATGGGGTTGCAGTTTCACCCTGAGAGAATGAGAAAGCCTGATTCTGAGGAATTTGATTATCCTGGATGCCCTTTTGC TTACAAGGTTTGTAAATTGATTGCTATGATTAAGAGAGTTTCATGA
Protein sequence (LotjaGi2g1v0239200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSDLSVILPRVLIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRVSGVHMLLSSFEPIHGVLLCEGEDIDPVWYE HDSMASGLSHEELDEIRRLHASDTAIDKEKDSIELSLAKLCLERNIPYMGICRGSQVLNVACGGSLYQDIGKELSTKVMH INYDDYDGHRHGVKVVENTPLFHWFKDSLEDGEIEIKVNSYHHQGVKRLAQRFVPMAFAPDGLIEGFYDPDAYNPDEGKF IMGLQFHPERMRKPDSEEFDYPGCPFAYKVCKLIAMIKRVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 270 | 269 | 2.2E-166 | – | |
| PANTHER | 2 | 270 | 269 | 2.2E-166 | – | |
| Gene3D | 8 | 260 | 253 | 2.1E-68 | ||
| CDD | 12 | 257 | 246 | 3.87001E-63 | – | |
| ProSiteProfiles | 22 | 281 | 260 | 11.676 | ||
| Pfam | 28 | 249 | 222 | 2.9E-40 | ||
| SUPERFAMILY | 28 | 254 | 227 | 5.58E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi2g1v0239200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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