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LotjaGi2g1v0239700.3

Overview

Field Value
Gene ID LotjaGi2g1v0239700
Transcript ID LotjaGi2g1v0239700.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT5G50180.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1; TrEMBL-Plants: tr|A0A151RNA2|A0A151RNA2_CAJCA Serine/threonine-protein kinase HT1; Found in the gene: LotjaGi2g1v0239700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:70073148..70075438) extracted from Lotus japonicus Gifu genome v1.2.

ATGGTTATAGTGACTGAACTTCTATTAGGTGGAACATTGCGCAAATATCTCATGAGTATGCGTCCAAAATGCTTGGATAT TTGTGTGGCTGTTGGATTTGCTCTTGATATCGCCAGAGCAATGGAATGCTTACACGCCCACGGGATCATTCATCGTGACC TTAAACCTGGTATGCCTGCATAATTGTTGGGCTTCTTAGTTTTTCAAGTGTAAGCTGGTAGCACTTAATGGAAAAAAAAT TAGGACTTAGCTATAATTTTTCTGAATTTGCATCGTGCACGAGTTACATGCACCTTAGTTACAAGCAAATATATAAATGA CACTTTTTCTTTGTTGGCTTACATGATCTCTGTTCAAATGGAAAAGTAGTTTAAAAGATGACTTTGTTATTGTTAATGAA CTTTACTATGAGCTACATCTACTATTCACAAATAGGCTCTATTTATGGAGTTTTATATTGTACATTTTTGTAAGGTTATC TATCTTTTCCCTTTATGTAGTTCAAACTATGATTAAACTATCATTCTATGATTAAACTATCATTCTATCCCTTTCAAGGC TAAAAAATCTGTAAAAAAACATTCTATGCAATGGAGTTTGAGATGAGAGTGAAATTTTATAAGATACAAAGCTTCTCATT ATCACTCAATTGATGGTACAATCAAGCAGTATCTGACTATCTGTTCTCTGTATGAAAGAGCAAGCATAATTCTGATATCT TGTTTCCTTCCCAGATAACTTGATATTGACAGCAGATCATAAGACAGTCAAACTTGCTGATTTTGGTCTAGCCAGAGAAG AGTCCTTAACAGAGATGATGACTGCTGAGACAGGAACATATCGCTGGATGGCTCCAGAGGTATTTCTTAGTTGCTTAAAA CTTACAATATTTATTAATTTTCCATTTGTGTGGTGCCATGTTAGTAATTCATCGTTACTTTCCTTTTTGGTGGCTAGCTT TACAGCACTGTTACTCTAAGACAAGGTGAGAAGAAGCATTACAACCATAAGGTGGATGCCTACAGCTTTGCAATTGTGTT GTGGGAACTCATCCATAATAAGTTGCCCTTTGAAGGCATGTCTAATCTACAGGCAGCATATGCAGCTGCTTTTAAGGTAG ATGACATTCTGATGTTTCTTTGATAATAATTTATACAAGATGATCATACTTGTTCATTCTATGGCTACTAGTCAAAGGTC TTCATTCCAGCAGTAGAATATGTGCACTGTAAAGTTACATTTTGTAGTGGTTGATACTTGATAATGTCTTGACACTTGTA TAAACATATATTAGGGTTCTAATTTGGAGGTATACCACTACTGGTCTAAAATTACTGTACCTCACTACCATTACTCCTCT AAGGGTGTGTTTGTGTAAAGAACTTAATTATGCGCTTGTAGCAATAAGCGCTTATTGGCTTATCGCTTCATAAGCTATTT GGAGAAACTAATTGGAATTGTGCATGATTGGAAATCCTTCAACAATTGATTCTAAAGACAGGAAAAAGCTTGTATGCGTA ACTTCTATGTTCTAGAATTGATTCCGAGGAAAGAGACGCTGATCCAAACATGCTATTAAGCTCAAAATAGGTTATAAGTA GGTATAGACACTTCTGCATAAGCTAACCTGAGCAGTTTATGAATATAAGCTCAAAACAGCTTATAGGTAGGTCTTAAGCT ATATACGTTTTATTTTATAAGCCTTAAGCTATTTACATAAGCTCCCCCAAACATTTGTACAATCGCTTATGCTATAAGAT AAACTCAAACTCTTCGAAACGGGGCCTAATTTAACTGTTGTCATTTTAGATACTTGATACGCTTATATAGCTGCACTTAT ACAGTTTTCTTTTCTCTTTTGTATCTGATCTTTATCTAAACTATAATCCTAATCTTACTTTTGGTTATTACTGAATGTAC TGCTTCTTGGTTTACAAAGATTCATGACACTTATATTTTGATTATTTCAGAATACAAGGCCTAGTGCTGAAGACCTTCCA GAGGATCTAGCTCTGATTGTAACTTCATGTTGGAAGGAGGATCCCAATGACCGACCCAATTTCACTCAAATCATACAGAT GCTCCTTCGATATCTCTGTACGGTTTCACCCACAGAGCCGGTTCTTCCGATGCGGATGATTTCACTTTCATCTGAGAATT CTGTGTTGCCACCGGAATCTCCTGGTACAAGTGCACTAATGCTTAGAAGAGATGACGCCGGAGAAACGCCAAAAGCCAAC ATGGAAGACAGGCCTAAAGGGATTTTCTTCTGCTTTAACCAGTGCTACTGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0239700.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTTATAGTGACTGAACTTCTATTAGGTGGAACATTGCGCAAATATCTCATGAGTATGCGTCCAAAATGCTTGGATAT TTGTGTGGCTGTTGGATTTGCTCTTGATATCGCCAGAGCAATGGAATGCTTACACGCCCACGGGATCATTCATCGTGACC TTAAACCTGATAACTTGATATTGACAGCAGATCATAAGACAGTCAAACTTGCTGATTTTGGTCTAGCCAGAGAAGAGTCC TTAACAGAGATGATGACTGCTGAGACAGGAACATATCGCTGGATGGCTCCAGAGCTTTACAGCACTGTTACTCTAAGACA AGGTGAGAAGAAGCATTACAACCATAAGGTGGATGCCTACAGCTTTGCAATTGTGTTGTGGGAACTCATCCATAATAAGT TGCCCTTTGAAGGCATGTCTAATCTACAGGCAGCATATGCAGCTGCTTTTAAGAATACAAGGCCTAGTGCTGAAGACCTT CCAGAGGATCTAGCTCTGATTGTAACTTCATGTTGGAAGGAGGATCCCAATGACCGACCCAATTTCACTCAAATCATACA GATGCTCCTTCGATATCTCTGTACGGTTTCACCCACAGAGCCGGTTCTTCCGATGCGGATGATTTCACTTTCATCTGAGA ATTCTGTGTTGCCACCGGAATCTCCTGGTACAAGTGCACTAATGCTTAGAAGAGATGACGCCGGAGAAACGCCAAAAGCC AACATGGAAGACAGGCCTAAAGGGATTTTCTTCTGCTTTAACCAGTGCTACTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0239700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVIVTELLLGGTLRKYLMSMRPKCLDICVAVGFALDIARAMECLHAHGIIHRDLKPDNLILTADHKTVKLADFGLAREES LTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNTRPSAEDL PEDLALIVTSCWKEDPNDRPNFTQIIQMLLRYLCTVSPTEPVLPMRMISLSSENSVLPPESPGTSALMLRRDDAGETPKA NMEDRPKGIFFCFNQCY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23257
1 257 257 2.8E-142 –
PANTHER
PTHR23257:SF806
1 257 257 2.8E-142 –
Gene3D
G3DSA:1.10.510.10
1 210 210 2.4E-53 –
SMART
SM00220
1 193 193 1.4E-15
IPR000719
ProSiteProfiles
PS50011
1 193 193 33.319
IPR000719
Pfam
PF07714
2 189 188 5.4E-40
IPR001245
SUPERFAMILY
SSF56112
2 220 219 1.03E-54
IPR011009
PRINTS
PR00109
5 18 14 2.0E-10
IPR001245
PRINTS
PR00109
43 61 19 2.0E-10
IPR001245
ProSitePatterns
PS00108
49 61 13 -
IPR008271
PRINTS
PR00109
117 139 23 2.0E-10
IPR001245
PRINTS
PR00109
160 182 23 2.0E-10
IPR001245

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0239700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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