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LotjaGi2g1v0247500.2

Overview

Field Value
Gene ID LotjaGi2g1v0247500
Transcript ID LotjaGi2g1v0247500.2
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT3G01490.2 Protein kinase superfamily protein; Swiss-Prot: sp|F4JTP5|STY46_ARATH Serine/threonine-protein kinase STY46; TrEMBL-Plants: tr|A0A151QQX2|A0A151QQX2_CAJCA Serine/threonine-protein kinase HT1; Found in the gene: LotjaGi2g1v0247500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:71295687..71299196) extracted from Lotus japonicus Gifu genome v1.2.

GATGATTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTCTGAGAGTGATAATAATATATACATGTTCTTGTAGACAGAC ACAGCCACCATTTTCCATTACATTTATGACCCACACTAGCTTCACCACCTGCAGTAGCAGCAGTACTAGAAGAAGACAGA CAGAGAAGACCCACTTAAGAAAAACTGCTCAAAACATTAACTTGAACCCAAAGTTAATCTCTTTTCATCATTTCATGGTT CTTCTGAGTCAAAATCCATAGTGGGGTTTGGTGAGTTTTGAGTTTGGTGGAAAAATGAGGAAGAGTGAGAGTGGAGGTGG TGGTGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTTCAGAGGCATCTGAGTAGAGCATGGA CCATGGAGAAGAACAAGGAGAAGGAAGATGATGAGGTTGGAGGAGGTGGTGGAGGAGGAAGGTCTGCAAGGAGCAGGCAA GAATGGGAGATTGATCCTTCTAAGCTCATCATCAAGTCTGTCATTGCTCGTGGCACTTTTGGCACTGTTCACCGTGGGAT TTATGATGGCCAAGATGTTGCAGGTACACACTCACACTCTCTCTCTTTGGATTAATCTACTGTTGGAGTGTTTTAACTGT TTTTAGATAGAGTATGCACAGTTTTATCATTACCTCTTTTGTTTAGTACTATATACTTATGCAACTTATGCTAGAGGCAG TTTTGTTCACTTGGGGAAGCTCATGTACTGGTTGGTGTTTTCAACTGAGACTGTTGCATAATGTGAAAATGTTTCCTACT TGTCTCCTCTTCCTGAAATGGGAAACATGTTTCATGGGTTGCTAAGCCTTCTTTCTTGCAAATGCCAATATTTCAAAGAC AAGAAGTACCTTATCTCAAATTTATGTGTTATCCCTATTCATTTGAGGTCTTAACTTTCAACGGAAGTACAACTAGGTGT TATAAGGAGTTTGTTAAAACAGATGTTTTAGTGTAACATGTTACATATGTCTTTCTTGGCTAACAGATCTGCTGCTTTTG CTGGTTCTTCAACTTATAGCTTTGCAGTCAAAACAACAATTTCTGCTCTTTTTATAAGTAAATAGAGTTGGACAAGAGTC TACATTATACTGTCTTTTATCTCCTTGAGTTCTTAAACAAACCATCTAAGTTGATAGCTTTTGGTTATTTTATTGATTGT TTATTGGCCGGAGCAGCATTGTAACTTTGCAGATCTGAGATTTACAAAATCCGTGATTCACAAGATTGAGTTACTTTGCT TCTCATTCTTTTCTTTTTTCTAGACTTCACAAGATCCAGTTGACTTGACAGTTAATTGCATGAACTTTAATATTATTTTC TTTTCTTTTTTGAACTTTCATGTGTTTCTTGTTTGTGACTGATGTGCACCTGATCTTACTAATGGTATAACAATTCAAAA TAAAAATAAAATTAATTGAAGTTGTTGACTTGCAATGTGTGGTTATTATGTTTCCTGCCTACATTCGTAATTCATTAAAT GTTCTTCTTAAAGTGATCAATGATAGTAGTTCCCTTTTTTGTTTTCTATGCAATCATGACGTGTTGAACATGATTAGATT AACAGTTCCTGGATTGTACACTTTTTAACTCTGCAGCCTTTCTACTGAACTTCTAATGAATGAGCAGGTTAAAGTAACTT GTGAATACATGCTCTCCAGCTGATTCAATTCCAAGCAATTTATCTTTCATTTTGTTTTCTCAGTTAAGCTCCTTGATTGG GGGGAAGAGGGCCACCGATCAGATGCTGAAATAGCGTCACTGAGAGCAGCTTTTACACAAGAAGTTGCTGTTTGGCACAA GCTTGACCATCCTAATGTAACCAAGGTAATATTTAGGTCTTCATTCTTTTCTTATGCTTAGGTCTTCATTCTTTTCTTCT TGTTAACCATGTCACCCCTTTACCTTGTATTGTGGAACATTCAAATAGCTTAGGCAGTGTTGTGAAATAGCAGATATTCC GGCGCTTTAGCGTAACACTCTGAGGGCTCACCGCTATTTTCCGCTCATAGGGTTTGATATAGCGGATTTTCGGCTTTCCG CTATTTTCCGCAATGCAATTAACAACACTGGCCTACAATGACAGTGTCACGTCCCGTCATTTTCTACTATGAATCAAATA AGATTATAACACAAAGTACATAAATAAACAAACAAGGAAAGGGGAAATTATTACATGTATTTGAACTATCTTAGGCAAGT TTAAAGCACTTGGGGCGGAAGGAAATTTCTAGCATTAGGATAACCTTCTGGTATTTATGTCATAATTTTCTTATTCACAC CTACTATGTCTATTATGCAGTTTCTTGGGGCAACAATCGGAACATCAGATCTACAGATACAAACGGAAAATGGTCATATA GGCATGCCGAGTAATGTTTGTTGTGTAGTTGTTGAATATTGTCCTGGGGGTGCACTGAAGTCTTATCTCATTAAAAACCG GAGAAGGAAGCTGGCTTTTAAAGTGGTGGTTCAACTGGCTCTTGACCTTGCAAGAGGGTCCAATCCATATGCCCTAATCT GTGTCACAAGTTTTAATTTGATTATCATTCTTTCTTAGCCTGAGAACTTTTATTATTTACTTTATAGGTTGAGTTATCTC CACATGAAGAAGATTGTTCACAGAGATGTTAAAACAGAAAATATGCTTCTCGACAAGACACGAATGTTGAAAATAGCCGA TTTTGGTGTAGCTCGTATTGAGGCATCCAATCCTCATGACATGACTGGGGAAACCGGAACCCTCGGTTACATGGCTCCTG AGGTGCATGCTTCAATTCCATTAAAAGTACATTTCTTGTGTATTCATATTCTGGGTTTTTTTCAAGCACCTATTAATATC TAGTCATTTCCTCTACTCGCATAAGATCTTGAAACCGCTAGCCTATGGCTATGTTAGTAACCACTCTTTCTTCTTCACTT TCTTGTCACATGGCATGCTCTATAGCCTACCTGATTGTAAAAGAACTAGGATGAATATTATGCTCTTAAAAATACAGGGG AAATTTACCAAAAAAGATGAATATAGATAGAATTTATACTATGTGGAGAAAGGAAAGCAAGAAACTGTTTCCACATAATC ATCACATTATTTCCATCCGTGTTGGTTTTGGTACATAATTACTGGAAGAACTGGGCAGGTTCCATACTTCCATTCACTCT CATCTACTCTGCGTATTTTAGAATGATAGAATCAATTATAGGTAGCTTGGCTTTGCATAGTAGTTCATGTTTTGTTTAAA TGGTTTCAGATTTTAGATATTGGTATATTAACCTTATCTGAAGAAATTGAGCAGGTACTAAATGGTAATCCGTACAATAG AAAATGTGATGTGTACAGTTTTGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCTGACCTTAGCTTCT CAGAAGTAACATCAGCCGTCGTGCGACAGGTATATGAAATGTATTAAGTGGCTTTACCAGCATTATTTGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0247500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCCGAGTAATGTTTGTTGTGTAGTTGTTGAATATTGTCCTGGGGGTGCACTGAAGTCTTATCTCATTAAAAACCGGAG AAGGAAGCTGGCTTTTAAAGTGGTGGTTCAACTGGCTCTTGACCTTGCAAGAGGGTTGAGTTATCTCCACATGAAGAAGA TTGTTCACAGAGATGTTAAAACAGAAAATATGCTTCTCGACAAGACACGAATGTTGAAAATAGCCGATTTTGGTGTAGCT CGTATTGAGGCATCCAATCCTCATGACATGACTGGGGAAACCGGAACCCTCGGTTACATGGCTCCTGAGGTACTAAATGG TAATCCGTACAATAGAAAATGTGATGTGTACAGTTTTGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATC CTGACCTTAGCTTCTCAGAAGTAACATCAGCCGTCGTGCGACAGGTATATGAAATGTATTAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0247500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MPSNVCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHMKKIVHRDVKTENMLLDKTRMLKIADFGVA RIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQVYEMY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
ProSiteProfiles
PS50011
1 153 153 30.563
IPR000719
SMART
SM00220
1 150 150 4.2E-11
IPR000719
PANTHER
PTHR44329:SF59
4 149 146 2.4E-100 –
Gene3D
G3DSA:3.30.200.20
4 94 91 4.2E-50 –
PANTHER
PTHR44329
4 149 146 2.4E-100 –
SUPERFAMILY
SSF56112
4 149 146 5.47E-50
IPR011009
Pfam
PF07714
5 148 144 8.7E-42
IPR001245
Gene3D
G3DSA:1.10.510.10
13 148 136 4.2E-50 –
ProSitePatterns
PS00108
54 66 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0247500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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