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LotjaGi2g1v0247500.3

Overview

Field Value
Gene ID LotjaGi2g1v0247500
Transcript ID LotjaGi2g1v0247500.3
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT3G01490.1 Protein kinase superfamily protein; Swiss-Prot: sp|O22558|STY8_ARATH Serine/threonine-protein kinase STY8; TrEMBL-Plants: tr|I1M016|I1M016_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0247500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:71295863..71299463) extracted from Lotus japonicus Gifu genome v1.2.

AAGAAAAACTGCTCAAAACATTAACTTGAACCCAAAGTTAATCTCTTTTCATCATTTCATGGTTCTTCTGAGTCAAAATC CATAGTGGGGTTTGGTGAGTTTTGAGTTTGGTGGAAAAATGAGGAAGAGTGAGAGTGGAGGTGGTGGTGGGTATGTGAGA GCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTTCAGAGGCATCTGAGTAGAGCATGGACCATGGAGAAGAACAA GGAGAAGGAAGATGATGAGGTTGGAGGAGGTGGTGGAGGAGGAAGGTCTGCAAGGAGCAGGCAAGAATGGGAGATTGATC CTTCTAAGCTCATCATCAAGTCTGTCATTGCTCGTGGCACTTTTGGCACTGTTCACCGTGGGATTTATGATGGCCAAGAT GTTGCAGGTACACACTCACACTCTCTCTCTTTGGATTAATCTACTGTTGGAGTGTTTTAACTGTTTTTAGATAGAGTATG CACAGTTTTATCATTACCTCTTTTGTTTAGTACTATATACTTATGCAACTTATGCTAGAGGCAGTTTTGTTCACTTGGGG AAGCTCATGTACTGGTTGGTGTTTTCAACTGAGACTGTTGCATAATGTGAAAATGTTTCCTACTTGTCTCCTCTTCCTGA AATGGGAAACATGTTTCATGGGTTGCTAAGCCTTCTTTCTTGCAAATGCCAATATTTCAAAGACAAGAAGTACCTTATCT CAAATTTATGTGTTATCCCTATTCATTTGAGGTCTTAACTTTCAACGGAAGTACAACTAGGTGTTATAAGGAGTTTGTTA AAACAGATGTTTTAGTGTAACATGTTACATATGTCTTTCTTGGCTAACAGATCTGCTGCTTTTGCTGGTTCTTCAACTTA TAGCTTTGCAGTCAAAACAACAATTTCTGCTCTTTTTATAAGTAAATAGAGTTGGACAAGAGTCTACATTATACTGTCTT TTATCTCCTTGAGTTCTTAAACAAACCATCTAAGTTGATAGCTTTTGGTTATTTTATTGATTGTTTATTGGCCGGAGCAG CATTGTAACTTTGCAGATCTGAGATTTACAAAATCCGTGATTCACAAGATTGAGTTACTTTGCTTCTCATTCTTTTCTTT TTTCTAGACTTCACAAGATCCAGTTGACTTGACAGTTAATTGCATGAACTTTAATATTATTTTCTTTTCTTTTTTGAACT TTCATGTGTTTCTTGTTTGTGACTGATGTGCACCTGATCTTACTAATGGTATAACAATTCAAAATAAAAATAAAATTAAT TGAAGTTGTTGACTTGCAATGTGTGGTTATTATGTTTCCTGCCTACATTCGTAATTCATTAAATGTTCTTCTTAAAGTGA TCAATGATAGTAGTTCCCTTTTTTGTTTTCTATGCAATCATGACGTGTTGAACATGATTAGATTAACAGTTCCTGGATTG TACACTTTTTAACTCTGCAGCCTTTCTACTGAACTTCTAATGAATGAGCAGGTTAAAGTAACTTGTGAATACATGCTCTC CAGCTGATTCAATTCCAAGCAATTTATCTTTCATTTTGTTTTCTCAGTTAAGCTCCTTGATTGGGGGGAAGAGGGCCACC GATCAGATGCTGAAATAGCGTCACTGAGAGCAGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAAT GTAACCAAGGTAATATTTAGGTCTTCATTCTTTTCTTATGCTTAGGTCTTCATTCTTTTCTTCTTGTTAACCATGTCACC CCTTTACCTTGTATTGTGGAACATTCAAATAGCTTAGGCAGTGTTGTGAAATAGCAGATATTCCGGCGCTTTAGCGTAAC ACTCTGAGGGCTCACCGCTATTTTCCGCTCATAGGGTTTGATATAGCGGATTTTCGGCTTTCCGCTATTTTCCGCAATGC AATTAACAACACTGGCCTACAATGACAGTGTCACGTCCCGTCATTTTCTACTATGAATCAAATAAGATTATAACACAAAG TACATAAATAAACAAACAAGGAAAGGGGAAATTATTACATGTATTTGAACTATCTTAGGCAAGTTTAAAGCACTTGGGGC GGAAGGAAATTTCTAGCATTAGGATAACCTTCTGGTATTTATGTCATAATTTTCTTATTCACACCTACTATGTCTATTAT GCAGTTTCTTGGGGCAACAATCGGAACATCAGATCTACAGATACAAACGGAAAATGGTCATATAGGCATGCCGAGTAATG TTTGTTGTGTAGTTGTTGAATATTGTCCTGGGGGTGCACTGAAGTCTTATCTCATTAAAAACCGGAGAAGGAAGCTGGCT TTTAAAGTGGTGGTTCAACTGGCTCTTGACCTTGCAAGAGGGTCCAATCCATATGCCCTAATCTGTGTCACAAGTTTTAA TTTGATTATCATTCTTTCTTAGCCTGAGAACTTTTATTATTTACTTTATAGGTTGAGTTATCTCCACATGAAGAAGATTG TTCACAGAGATGTTAAAACAGAAAATATGCTTCTCGACAAGACACGAATGTTGAAAATAGCCGATTTTGGTGTAGCTCGT ATTGAGGCATCCAATCCTCATGACATGACTGGGGAAACCGGAACCCTCGGTTACATGGCTCCTGAGGTGCATGCTTCAAT TCCATTAAAAGTACATTTCTTGTGTATTCATATTCTGGGTTTTTTTCAAGCACCTATTAATATCTAGTCATTTCCTCTAC TCGCATAAGATCTTGAAACCGCTAGCCTATGGCTATGTTAGTAACCACTCTTTCTTCTTCACTTTCTTGTCACATGGCAT GCTCTATAGCCTACCTGATTGTAAAAGAACTAGGATGAATATTATGCTCTTAAAAATACAGGGGAAATTTACCAAAAAAG ATGAATATAGATAGAATTTATACTATGTGGAGAAAGGAAAGCAAGAAACTGTTTCCACATAATCATCACATTATTTCCAT CCGTGTTGGTTTTGGTACATAATTACTGGAAGAACTGGGCAGGTTCCATACTTCCATTCACTCTCATCTACTCTGCGTAT TTTAGAATGATAGAATCAATTATAGGTAGCTTGGCTTTGCATAGTAGTTCATGTTTTGTTTAAATGGTTTCAGATTTTAG ATATTGGTATATTAACCTTATCTGAAGAAATTGAGCAGGTACTAAATGGTAATCCGTACAATAGAAAATGTGATGTGTAC AGTTTTGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCTGACCTTAGCTTCTCAGAAGTAACATCAGC CGTCGTGCGACAGGTATATGAAATGTATTAAGTGGCTTTACCAGCATTATTTGACACTGATACCTCCCAACATACTGTTC TTATTGTAATTAAAAAATTTCTATGGAACTGCAGAATCTGAGACCAGAGATTCCGCGTTGTTGTCCAAGCTCTCTGGCAA ATGTGATGAAAAGATGCTGGGATGCAAATCCTGACAAGAGGCCAGAGATGGATGAAGTGGTGCCCATGTTGGAAGCAATT GACACTTCAAAGGGTGGAGGAATGATCCCTCATGATCAGCCTCAGGGTTGTCTTTGTTTCCGCAGGTACCGAGGACCTTG A
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0247500.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGAAGAACAAGGAGAAGGAAGATGATGAGGTTGGAGGAGGTGGTGGAGGAGGAAGGTCTGCAAGGAGCAGGCAAGA ATGGGAGATTGATCCTTCTAAGCTCATCATCAAGTCTGTCATTGCTCGTGGCACTTTTGGCACTGTTCACCGTGGGATTT ATGATGGCCAAGATGTTGCAGTTAAGCTCCTTGATTGGGGGGAAGAGGGCCACCGATCAGATGCTGAAATAGCGTCACTG AGAGCAGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTAACCAAGTTTCTTGGGGCAACAAT CGGAACATCAGATCTACAGATACAAACGGAAAATGGTCATATAGGCATGCCGAGTAATGTTTGTTGTGTAGTTGTTGAAT ATTGTCCTGGGGGTGCACTGAAGTCTTATCTCATTAAAAACCGGAGAAGGAAGCTGGCTTTTAAAGTGGTGGTTCAACTG GCTCTTGACCTTGCAAGAGGGTTGAGTTATCTCCACATGAAGAAGATTGTTCACAGAGATGTTAAAACAGAAAATATGCT TCTCGACAAGACACGAATGTTGAAAATAGCCGATTTTGGTGTAGCTCGTATTGAGGCATCCAATCCTCATGACATGACTG GGGAAACCGGAACCCTCGGTTACATGGCTCCTGAGGTACTAAATGGTAATCCGTACAATAGAAAATGTGATGTGTACAGT TTTGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCTGACCTTAGCTTCTCAGAAGTAACATCAGCCGT CGTGCGACAGAATCTGAGACCAGAGATTCCGCGTTGTTGTCCAAGCTCTCTGGCAAATGTGATGAAAAGATGCTGGGATG CAAATCCTGACAAGAGGCCAGAGATGGATGAAGTGGTGCCCATGTTGGAAGCAATTGACACTTCAAAGGGTGGAGGAATG ATCCCTCATGATCAGCCTCAGGGTTGTCTTTGTTTCCGCAGGTACCGAGGACCTTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0247500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEKNKEKEDDEVGGGGGGGRSARSRQEWEIDPSKLIIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSDAEIASL RAAFTQEVAVWHKLDHPNVTKFLGATIGTSDLQIQTENGHIGMPSNVCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQL ALDLARGLSYLHMKKIVHRDVKTENMLLDKTRMLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYS FGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVPMLEAIDTSKGGGM IPHDQPQGCLCFRRYRGP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR44329:SF59
1 337 337 6.6E-200 –
MobiDBLite
mobidb-lite
1 25 25 - –
PANTHER
PTHR44329
1 337 337 6.6E-200 –
PIRSF
PIRSF000654
18 318 301 8.2E-58 –
SUPERFAMILY
SSF56112
23 309 287 2.32E-77
IPR011009
Gene3D
G3DSA:3.30.200.20
24 216 193 3.0E-84 –
ProSiteProfiles
PS50011
35 309 275 41.418
IPR000719
SMART
SM00220
35 309 275 2.8E-61
IPR000719
Pfam
PF07714
37 308 272 6.3E-63
IPR001245
CDD
cd13999
41 309 269 1.54265E-114 –
PRINTS
PR00109
132 145 14 3.3E-15
IPR001245
Gene3D
G3DSA:1.10.510.10
135 306 172 3.0E-84 –
PRINTS
PR00109
170 188 19 3.3E-15
IPR001245
ProSitePatterns
PS00108
176 188 13 -
IPR008271
PRINTS
PR00109
236 258 23 3.3E-15
IPR001245
PRINTS
PR00109
280 302 23 3.3E-15
IPR001245

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0247500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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