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LotjaGi2g1v0247500.5

Overview

Field Value
Gene ID LotjaGi2g1v0247500
Transcript ID LotjaGi2g1v0247500.5
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT3G01490.2 Protein kinase superfamily protein; Swiss-Prot: sp|O22558|STY8_ARATH Serine/threonine-protein kinase STY8; TrEMBL-Plants: tr|A0A0R0EQ83|A0A0R0EQ83_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0247500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:71295990..71299463) extracted from Lotus japonicus Gifu genome v1.2.

AGTGAGAGTGGAGGTGGTGGTGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTTCAGAGGCA TCTGAGTAGAGCATGGACCATGGAGAAGAACAAGGAGAAGGAAGATGATGAGGTTGGAGGAGGTGGTGGAGGAGGAAGGT CTGCAAGGAGCAGGCAAGAATGGGAGATTGATCCTTCTAAGCTCATCATCAAGTCTGTCATTGCTCGTGGCACTTTTGGC ACTGTTCACCGTGGGATTTATGATGGCCAAGATGTTGCAGGTACACACTCACACTCTCTCTCTTTGGATTAATCTACTGT TGGAGTGTTTTAACTGTTTTTAGATAGAGTATGCACAGTTTTATCATTACCTCTTTTGTTTAGTACTATATACTTATGCA ACTTATGCTAGAGGCAGTTTTGTTCACTTGGGGAAGCTCATGTACTGGTTGGTGTTTTCAACTGAGACTGTTGCATAATG TGAAAATGTTTCCTACTTGTCTCCTCTTCCTGAAATGGGAAACATGTTTCATGGGTTGCTAAGCCTTCTTTCTTGCAAAT GCCAATATTTCAAAGACAAGAAGTACCTTATCTCAAATTTATGTGTTATCCCTATTCATTTGAGGTCTTAACTTTCAACG GAAGTACAACTAGGTGTTATAAGGAGTTTGTTAAAACAGATGTTTTAGTGTAACATGTTACATATGTCTTTCTTGGCTAA CAGATCTGCTGCTTTTGCTGGTTCTTCAACTTATAGCTTTGCAGTCAAAACAACAATTTCTGCTCTTTTTATAAGTAAAT AGAGTTGGACAAGAGTCTACATTATACTGTCTTTTATCTCCTTGAGTTCTTAAACAAACCATCTAAGTTGATAGCTTTTG GTTATTTTATTGATTGTTTATTGGCCGGAGCAGCATTGTAACTTTGCAGATCTGAGATTTACAAAATCCGTGATTCACAA GATTGAGTTACTTTGCTTCTCATTCTTTTCTTTTTTCTAGACTTCACAAGATCCAGTTGACTTGACAGTTAATTGCATGA ACTTTAATATTATTTTCTTTTCTTTTTTGAACTTTCATGTGTTTCTTGTTTGTGACTGATGTGCACCTGATCTTACTAAT GGTATAACAATTCAAAATAAAAATAAAATTAATTGAAGTTGTTGACTTGCAATGTGTGGTTATTATGTTTCCTGCCTACA TTCGTAATTCATTAAATGTTCTTCTTAAAGTGATCAATGATAGTAGTTCCCTTTTTTGTTTTCTATGCAATCATGACGTG TTGAACATGATTAGATTAACAGTTCCTGGATTGTACACTTTTTAACTCTGCAGCCTTTCTACTGAACTTCTAATGAATGA GCAGGTTAAAGTAACTTGTGAATACATGCTCTCCAGCTGATTCAATTCCAAGCAATTTATCTTTCATTTTGTTTTCTCAG TTAAGCTCCTTGATTGGGGGGAAGAGGGCCACCGATCAGATGCTGAAATAGCGTCACTGAGAGCAGCTTTTACACAAGAA GTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTAACCAAGGTAATATTTAGGTCTTCATTCTTTTCTTATGCTTAGGT CTTCATTCTTTTCTTCTTGTTAACCATGTCACCCCTTTACCTTGTATTGTGGAACATTCAAATAGCTTAGGCAGTGTTGT GAAATAGCAGATATTCCGGCGCTTTAGCGTAACACTCTGAGGGCTCACCGCTATTTTCCGCTCATAGGGTTTGATATAGC GGATTTTCGGCTTTCCGCTATTTTCCGCAATGCAATTAACAACACTGGCCTACAATGACAGTGTCACGTCCCGTCATTTT CTACTATGAATCAAATAAGATTATAACACAAAGTACATAAATAAACAAACAAGGAAAGGGGAAATTATTACATGTATTTG AACTATCTTAGGCAAGTTTAAAGCACTTGGGGCGGAAGGAAATTTCTAGCATTAGGATAACCTTCTGGTATTTATGTCAT AATTTTCTTATTCACACCTACTATGTCTATTATGCAGTTTCTTGGGGCAACAATCGGAACATCAGATCTACAGATACAAA CGGAAAATGGTCATATAGGCATGCCGAGTAATGTTTGTTGTGTAGTTGTTGAATATTGTCCTGGGGGTGCACTGAAGTCT TATCTCATTAAAAACCGGAGAAGGAAGCTGGCTTTTAAAGTGGTGGTTCAACTGGCTCTTGACCTTGCAAGAGGGTCCAA TCCATATGCCCTAATCTGTGTCACAAGTTTTAATTTGATTATCATTCTTTCTTAGCCTGAGAACTTTTATTATTTACTTT ATAGGTTGAGTTATCTCCACATGAAGAAGATTGTTCACAGAGATGTTAAAACAGAAAATATGCTTCTCGACAAGACACGA ATGTTGAAAATAGCCGATTTTGGTGTAGCTCGTATTGAGGCATCCAATCCTCATGACATGACTGGGGAAACCGGAACCCT CGGTTACATGGCTCCTGAGGTGCATGCTTCAATTCCATTAAAAGTACATTTCTTGTGTATTCATATTCTGGGTTTTTTTC AAGCACCTATTAATATCTAGTCATTTCCTCTACTCGCATAAGATCTTGAAACCGCTAGCCTATGGCTATGTTAGTAACCA CTCTTTCTTCTTCACTTTCTTGTCACATGGCATGCTCTATAGCCTACCTGATTGTAAAAGAACTAGGATGAATATTATGC TCTTAAAAATACAGGGGAAATTTACCAAAAAAGATGAATATAGATAGAATTTATACTATGTGGAGAAAGGAAAGCAAGAA ACTGTTTCCACATAATCATCACATTATTTCCATCCGTGTTGGTTTTGGTACATAATTACTGGAAGAACTGGGCAGGTTCC ATACTTCCATTCACTCTCATCTACTCTGCGTATTTTAGAATGATAGAATCAATTATAGGTAGCTTGGCTTTGCATAGTAG TTCATGTTTTGTTTAAATGGTTTCAGATTTTAGATATTGGTATATTAACCTTATCTGAAGAAATTGAGCAGGTACTAAAT GGTAATCCGTACAATAGAAAATGTGATGTGTACAGTTTTGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATA TCCTGACCTTAGCTTCTCAGAAGTAACATCAGCCGTCGTGCGACAGGTATATGAAATGTATTAAGTGGCTTTACCAGCAT TATTTGACACTGATACCTCCCAACATACTGTTCTTATTGTAATTAAAAAATTTCTATGGAACTGCAGAATCTGAGACCAG AGATTCCGCGTTGTTGTCCAAGCTCTCTGGCAAATGTGATGAAAAGATGCTGGGATGCAAATCCTGACAAGAGGCCAGAG ATGGATGAAGTGGTGCCCATGTTGGAAGCAATTGACACTTCAAAGGGTGGAGGAATGATCCCTCATGATCAGCCTCAGGG TTGTCTTTGTTTCCGCAGGTACCGAGGACCTTGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0247500.5) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGAAGAACAAGGAGAAGGAAGATGATGAGGTTGGAGGAGGTGGTGGAGGAGGAAGGTCTGCAAGGAGCAGGCAAGA ATGGGAGATTGATCCTTCTAAGCTCATCATCAAGTCTGTCATTGCTCGTGGCACTTTTGGCACTGTTCACCGTGGGATTT ATGATGGCCAAGATGTTGCAGTTAAGCTCCTTGATTGGGGGGAAGAGGGCCACCGATCAGATGCTGAAATAGCGTCACTG AGAGCAGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTAACCAAGTTTCTTGGGGCAACAAT CGGAACATCAGATCTACAGATACAAACGGAAAATGGTCATATAGGCATGCCGAGTAATGTTTGTTGTGTAGTTGTTGAAT ATTGTCCTGGGGGTGCACTGAAGTCTTATCTCATTAAAAACCGGAGAAGGAAGCTGGCTTTTAAAGTGGTGGTTCAACTG GCTCTTGACCTTGCAAGAGGGTTGAGTTATCTCCACATGAAGAAGATTGTTCACAGAGATGTTAAAACAGAAAATATGCT TCTCGACAAGACACGAATGTTGAAAATAGCCGATTTTGGTGTAGCTCGTATTGAGGCATCCAATCCTCATGACATGACTG GGGAAACCGGAACCCTCGGTACTAAATGGTAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0247500.5) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEKNKEKEDDEVGGGGGGGRSARSRQEWEIDPSKLIIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSDAEIASL RAAFTQEVAVWHKLDHPNVTKFLGATIGTSDLQIQTENGHIGMPSNVCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQL ALDLARGLSYLHMKKIVHRDVKTENMLLDKTRMLKIADFGVARIEASNPHDMTGETGTLGTKW
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR44329:SF59
1 220 220 7.3E-122 –
PANTHER
PTHR44329
1 220 220 7.3E-122 –
MobiDBLite
mobidb-lite
1 25 25 - –
PIRSF
PIRSF000654
18 221 204 1.8E-28 –
SUPERFAMILY
SSF56112
22 219 198 2.6E-44
IPR011009
Gene3D
G3DSA:3.30.200.20
23 118 96 7.0E-21 –
ProSiteProfiles
PS50011
35 223 189 28.824
IPR000719
SMART
SM00220
35 222 188 1.8E-10
IPR000719
Pfam
PF07714
37 223 187 1.2E-33
IPR001245
Gene3D
G3DSA:1.10.510.10
120 223 104 1.6E-24 –
ProSitePatterns
PS00108
176 188 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0247500.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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