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LotjaGi2g1v0247500.6

Overview

Field Value
Gene ID LotjaGi2g1v0247500
Transcript ID LotjaGi2g1v0247500.6
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT3G01490.2 Protein kinase superfamily protein; Swiss-Prot: sp|O22558|STY8_ARATH Serine/threonine-protein kinase STY8; TrEMBL-Plants: tr|I1M016|I1M016_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0247500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:71295993..71299196) extracted from Lotus japonicus Gifu genome v1.2.

GAGAGTGGAGGTGGTGGTGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTTCAGAGGCATCT GAGTAGAGCATGGACCATGGAGAAGAACAAGGAGAAGGAAGATGATGAGGTTGGAGGAGGTGGTGGAGGAGGAAGGTCTG CAAGGAGCAGGCAAGAATGGGAGATTGATCCTTCTAAGCTCATCATCAAGTCTGTCATTGCTCGTGGCACTTTTGGCACT GTTCACCGTGGGATTTATGATGGCCAAGATGTTGCAGGTACACACTCACACTCTCTCTCTTTGGATTAATCTACTGTTGG AGTGTTTTAACTGTTTTTAGATAGAGTATGCACAGTTTTATCATTACCTCTTTTGTTTAGTACTATATACTTATGCAACT TATGCTAGAGGCAGTTTTGTTCACTTGGGGAAGCTCATGTACTGGTTGGTGTTTTCAACTGAGACTGTTGCATAATGTGA AAATGTTTCCTACTTGTCTCCTCTTCCTGAAATGGGAAACATGTTTCATGGGTTGCTAAGCCTTCTTTCTTGCAAATGCC AATATTTCAAAGACAAGAAGTACCTTATCTCAAATTTATGTGTTATCCCTATTCATTTGAGGTCTTAACTTTCAACGGAA GTACAACTAGGTGTTATAAGGAGTTTGTTAAAACAGATGTTTTAGTGTAACATGTTACATATGTCTTTCTTGGCTAACAG ATCTGCTGCTTTTGCTGGTTCTTCAACTTATAGCTTTGCAGTCAAAACAACAATTTCTGCTCTTTTTATAAGTAAATAGA GTTGGACAAGAGTCTACATTATACTGTCTTTTATCTCCTTGAGTTCTTAAACAAACCATCTAAGTTGATAGCTTTTGGTT ATTTTATTGATTGTTTATTGGCCGGAGCAGCATTGTAACTTTGCAGATCTGAGATTTACAAAATCCGTGATTCACAAGAT TGAGTTACTTTGCTTCTCATTCTTTTCTTTTTTCTAGACTTCACAAGATCCAGTTGACTTGACAGTTAATTGCATGAACT TTAATATTATTTTCTTTTCTTTTTTGAACTTTCATGTGTTTCTTGTTTGTGACTGATGTGCACCTGATCTTACTAATGGT ATAACAATTCAAAATAAAAATAAAATTAATTGAAGTTGTTGACTTGCAATGTGTGGTTATTATGTTTCCTGCCTACATTC GTAATTCATTAAATGTTCTTCTTAAAGTGATCAATGATAGTAGTTCCCTTTTTTGTTTTCTATGCAATCATGACGTGTTG AACATGATTAGATTAACAGTTCCTGGATTGTACACTTTTTAACTCTGCAGCCTTTCTACTGAACTTCTAATGAATGAGCA GGTTAAAGTAACTTGTGAATACATGCTCTCCAGCTGATTCAATTCCAAGCAATTTATCTTTCATTTTGTTTTCTCAGTTA AGCTCCTTGATTGGGGGGAAGAGGGCCACCGATCAGATGCTGAAATAGCGTCACTGAGAGCAGCTTTTACACAAGAAGTT GCTGTTTGGCACAAGCTTGACCATCCTAATGTAACCAAGGTAATATTTAGGTCTTCATTCTTTTCTTATGCTTAGGTCTT CATTCTTTTCTTCTTGTTAACCATGTCACCCCTTTACCTTGTATTGTGGAACATTCAAATAGCTTAGGCAGTGTTGTGAA ATAGCAGATATTCCGGCGCTTTAGCGTAACACTCTGAGGGCTCACCGCTATTTTCCGCTCATAGGGTTTGATATAGCGGA TTTTCGGCTTTCCGCTATTTTCCGCAATGCAATTAACAACACTGGCCTACAATGACAGTGTCACGTCCCGTCATTTTCTA CTATGAATCAAATAAGATTATAACACAAAGTACATAAATAAACAAACAAGGAAAGGGGAAATTATTACATGTATTTGAAC TATCTTAGGCAAGTTTAAAGCACTTGGGGCGGAAGGAAATTTCTAGCATTAGGATAACCTTCTGGTATTTATGTCATAAT TTTCTTATTCACACCTACTATGTCTATTATGCAGTTTCTTGGGGCAACAATCGGAACATCAGATCTACAGATACAAACGG AAAATGGTCATATAGGCATGCCGAGTAATGTTTGTTGTGTAGTTGTTGAATATTGTCCTGGGGGTGCACTGAAGTCTTAT CTCATTAAAAACCGGAGAAGGAAGCTGGCTTTTAAAGTGGTGGTTCAACTGGCTCTTGACCTTGCAAGAGGGTCCAATCC ATATGCCCTAATCTGTGTCACAAGTTTTAATTTGATTATCATTCTTTCTTAGCCTGAGAACTTTTATTATTTACTTTATA GGTTGAGTTATCTCCACATGAAGAAGATTGTTCACAGAGATGTTAAAACAGAAAATATGCTTCTCGACAAGACACGAATG TTGAAAATAGCCGATTTTGGTGTAGCTCGTATTGAGGCATCCAATCCTCATGACATGACTGGGGAAACCGGAACCCTCGG TTACATGGCTCCTGAGGTGCATGCTTCAATTCCATTAAAAGTACATTTCTTGTGTATTCATATTCTGGGTTTTTTTCAAG CACCTATTAATATCTAGTCATTTCCTCTACTCGCATAAGATCTTGAAACCGCTAGCCTATGGCTATGTTAGTAACCACTC TTTCTTCTTCACTTTCTTGTCACATGGCATGCTCTATAGCCTACCTGATTGTAAAAGAACTAGGATGAATATTATGCTCT TAAAAATACAGGGGAAATTTACCAAAAAAGATGAATATAGATAGAATTTATACTATGTGGAGAAAGGAAAGCAAGAAACT GTTTCCACATAATCATCACATTATTTCCATCCGTGTTGGTTTTGGTACATAATTACTGGAAGAACTGGGCAGGTTCCATA CTTCCATTCACTCTCATCTACTCTGCGTATTTTAGAATGATAGAATCAATTATAGGTAGCTTGGCTTTGCATAGTAGTTC ATGTTTTGTTTAAATGGTTTCAGATTTTAGATATTGGTATATTAACCTTATCTGAAGAAATTGAGCAGGTACTAAATGGT AATCCGTACAATAGAAAATGTGATGTGTACAGTTTTGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCC TGACCTTAGCTTCTCAGAAGTAACATCAGCCGTCGTGCGACAGGTATATGAAATGTATTAAGTGGCTTTACCAGCATTAT TTGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0247500.6) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGAAGAACAAGGAGAAGGAAGATGATGAGGTTGGAGGAGGTGGTGGAGGAGGAAGGTCTGCAAGGAGCAGGCAAGA ATGGGAGATTGATCCTTCTAAGCTCATCATCAAGTCTGTCATTGCTCGTGGCACTTTTGGCACTGTTCACCGTGGGATTT ATGATGGCCAAGATGTTGCAGTTAAGCTCCTTGATTGGGGGGAAGAGGGCCACCGATCAGATGCTGAAATAGCGTCACTG AGAGCAGCTTTTACACAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTAACCAAGTTTCTTGGGGCAACAAT CGGAACATCAGATCTACAGATACAAACGGAAAATGGTCATATAGGCATGCCGAGTAATGTTTGTTGTGTAGTTGTTGAAT ATTGTCCTGGGGGTGCACTGAAGTCTTATCTCATTAAAAACCGGAGAAGGAAGCTGGCTTTTAAAGTGGTGGTTCAACTG GCTCTTGACCTTGCAAGAGGGTTGAGTTATCTCCACATGAAGAAGATTGTTCACAGAGATGTTAAAACAGAAAATATGCT TCTCGACAAGACACGAATGTTGAAAATAGCCGATTTTGGTGTAGCTCGTATTGAGGCATCCAATCCTCATGACATGACTG GGGAAACCGGAACCCTCGGTTACATGGCTCCTGAGGTACTAAATGGTAATCCGTACAATAGAAAATGTGATGTGTACAGT TTTGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCTGACCTTAGCTTCTCAGAAGTAACATCAGCCGT CGTGCGACAGGTATATGAAATGTATTAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0247500.6) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEKNKEKEDDEVGGGGGGGRSARSRQEWEIDPSKLIIKSVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSDAEIASL RAAFTQEVAVWHKLDHPNVTKFLGATIGTSDLQIQTENGHIGMPSNVCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQL ALDLARGLSYLHMKKIVHRDVKTENMLLDKTRMLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYS FGICLWEIYCCDMPYPDLSFSEVTSAVVRQVYEMY
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR44329
1 270 270 4.2E-165 –
PANTHER
PTHR44329:SF59
1 270 270 4.2E-165 –
MobiDBLite
mobidb-lite
1 25 25 - –
PIRSF
PIRSF000654
18 271 254 1.1E-43 –
SUPERFAMILY
SSF56112
22 272 251 9.02E-66
IPR011009
Gene3D
G3DSA:3.30.200.20
23 118 96 1.1E-20 –
ProSiteProfiles
PS50011
35 275 241 38.633
IPR000719
SMART
SM00220
35 272 238 2.4E-41
IPR000719
Pfam
PF07714
37 270 234 1.8E-50
IPR001245
CDD
cd13999
41 270 230 2.93165E-90 –
Gene3D
G3DSA:1.10.510.10
120 274 155 9.9E-46 –
ProSitePatterns
PS00108
176 188 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0247500.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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