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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0257500 |
| Transcript ID | LotjaGi2g1v0257500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4; TrEMBL-Plants: tr|G7K2V5|G7K2V5_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi2g1v0257500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:72353045..72359209) extracted from Lotus japonicus Gifu genome v1.2.
CTCTTCTCTTTATTAATCTTCTAGCATGATACTAGTCTTGCACTGAAAATCTGCAATTCTCAAACTTTTGTATCTTCATT TTGTGAGGAGAAACTTAGAATATGGCTGAGGCTGTGCTTGAAATTGCTCTTGAGAATTTGAGCTCACTCATTCAGAAGGA GCTTGGCTTGTTTCTGGGTTTTGATCAAGAATTCAAAAGGCTGTCCAGCACACTCACTGCAATCAAGGCAACACTTGAAG ATGCAGAGGAGAGACAATTCACTGAGAAAGCTATTAAGGATTGGCTGCGAAAGCTGAAAGATGCTGCTTATGTCCTGGAT GACATCTTGGACGAGTGCGCCACTGAAGCATTGGAGATGCAGAATGGAGGATTCATGTGTGGTTTATAAGACAAGGAACA AATCTCTTGTTGCTTATCCTCTTTTCATCCCAAGCATGTTGTCTTCCGTCGTAGAATTGCTAAGAAAATGAAGAGGATAA GTGAGAGGTTAGATGAAATTTCTGAAGAGAGGAGTAAGTTTCATTTGACTGAGATGGTTACCCAGAAAAGAGCTGAGTGG CGCCAAACCACCTCCATCATTGCTCAACCTCATGTCTATGGAAGAGATGAAGATAAGGATAGAATTGTAGACTTTTTGGT TGGTGATTCTTCGAGTTTCGAGGACTTAGTGGTCTATCCAATACTGGGTTTGGGTGGACTTGGAAAAACAACACTTGCCC AAATTGTCTTCAATCATGAGAGGGTAGTCAACCACTTTGAACAAAGAATTTGGGTGTGCGTTTCGGAAGATTTCAGCTTG AAAAGAATGACAAAAGCTATCATAGAATCAGCATCCGGGCATGCCTGTGAGGATTTAGATCTAGACCCACTGCAGAGGAA ACTTATAGATTTACTGCAAGGAAGAAGATATTTGATTGTTCTGGACGATGTGTGGGACGATGAACAAGAGAATTGGCTGA GGTTGAAATCTTTACTGATACATGGAGGTAAGGGTGCTTCAATTTTGGTCACTACTCGTCTCCAGAAAGTTGTAGCCATC ATGGGAACAATGCCTCCTCATGAATTGTCAATGCTATCCAATGATGATTGTTGGGAATTGTTTAAACAACGAGCATTTGG ACCGAGCGAGGTAGAACGTGCAGAGCTTGTGGGCATAGGAAAGGAAATAGTAAAGAAGTGTGGGGGAGTGCCTCTTGCAG CAATAGCAATAGGAAGTCTCTTGCGCTTTAAAAGAGAGGAGAAAGAATGGCTCCGTATCAAGGAAAGCAAACTGTGGAGC TTGGAAGGTGAGAACTTTGTCATGCCTTCCTTGATACTAAGTTACTTGAACTTGCCCTTAAAATTGAGACAATGTTTTTC CTTCTGTGCATTATTTCCCAAAGATGAAATAATAAGCAGGCAGTTTCTAATTGAACTTTGGATGGCTAATGGATTGGTTT CGTCCAATGAAATGGTGGATGCAGAGGATATCGGAGATGAGTTATTTAATGAATTATATTGGAGATCAATTTTCCAAGAT ATTAAGACAGATGAATTTGGCAAAATTACAAGTTTCAAGATGCATGATCTTGTTCATGATCTTGCTCAATATGTTGCCGA GGAAGTCTGTTGCAGTGCAGTTAATAATGGTATAGCTGATGTGTCTGAAGGAATCCGGCACCTATCATTTTATAGGATAG CCTCATGGAAACAGGAAGTTAGTTCAATCCAGTCGGGTCGATTCAAATCTTTGAAGACCTGCATATTAGGGGAACATGTT TATCTATTTGGGGGTCGTTCAGTAGAGGCATTGAAATCTAATTCTTTGCGGATGCTTAACTACCACCGCCTAGGAAGTTT GTCAACTTCAATTGGTCGTTTCAAATATCTAAGACACTTAGATATCTCTTCCGGATCGTTCAAATCTCTTCCGGAATCCC TTTGCATGCTCTGGAATTTGCAGATTTTGAAATTAGACAATTGTCGTTATCTGAAAAAGTTACCTGCTAGTTTGGTACGC CTAAAAGCTCTACAGCATCTATCATTGATTGGCTGCTATTCTTTATCAAGATTTCCCCCTCAAATGGGGAAGTTGACTTG TCTAAGGACTTTAAGCATGTATTTTGTTGGCAAGGAAGAAGGGTTCCAGTTGGCAGAATTGGGACGGTTGAACCTTAAAG GACAACTTCACATCAAGCACCTGGAGAAAGTAAAAAGTGTAATTGATGCTCAAGAAGCCAACATGTCGAGTAAGCACCTG AATAATTTGCAGTTGTCATGGGGGAGAAATGAAAACTGCCAATCACAGGAAAATGTTGAGCAGATTCTTGAAGTGCTTCA ACCGCATACCCAACAACTTCAAATTCTTGCTGTGGAAGGATATACAGGTGCATGTTTCCCACAATGGATGTCCAGTCTTT CTCTCAAATATTTAAATTCTTTAGAACTTGTGGATTGCAAAAGCTGCTTAAACCTTCCGCAGCTAGGGAAACTACCTTCT CTGAAGTATCTAAGTATATCCAACATGAGTCGTGAAATAATATACTTATACGAGGAGTCCTGTGCTGATGGAATTTTCAT AGCTCTGGAATCTCTTATACTGGAGAAGATGCCGAACTTGAAAAAGTTATCAAGGGAGGATGGAGAAAACATGTTCCCGC ACCTTTCAGATCTTGAAATTATTGAATGTCCTCAATTGTTAGGGCTTCCACGCCTTCCATCTATGAACAGTCTAACTATA CGGGGGGAAGGAAACCTGGATTTACTAAATTCAATTTATCAATTTGGTAGTCTTGAACAGCTATATTTGGGAGGAAACAA AGAGCTAACTTGCTTTCCAAATGGGATGCTAAGTAACCTTTCTTCTCTAAAGAGACTGCACATTTTTGGGTGCTCCAAAC TTGAGGAGTTACTCCCAAATGAAGTCGTTAACCTTGGTGCTCTCCAACAACTGGACATAAAACATTGCCAGAGCCTCAAT TCATTAACAAATGGAGTATTGCAAGGGTTGCACTCTCTCAAGAAATTAGTTATTGTGGGGAGCATAAGTTCAATATGTCA GCAGGTTTTCAATACCTTACTTGCCTTGAGCAGTTGGCGATTCATGGTTGCTCAAAAATTGAAGGATTACAGGAGGCTTT ACAGCATGTGACTGCCCTGAAAACCTTAATATTGTCTGATCTTCCAAACCTAGTATCCCTGCCCTCCTACTTGGGAAACC TTGGCTCGCTTCAAATTTTAGCTATTTCTAAGTGCCCCAAGTTGACGTGTATTCCAATGAGTATCCAATCCCTGAAAAAG TTGGGAATTTACGGCTGTGAAGAGTTAGCGAAGCGATGTCAGCTGGAAACAGGGGAGGATTGGTCAAATATAGCTCATGT TCAAGATATTGTAATACAAAACAGTGGAGCGCGCTTCTGCTTGTGCGGATGGGGTGATGAGGAACATAAGGCTGCAGCTT TATTCAAGAACGACCGCCCTCAAGAATTAGAAGATCTATATCTCCATTACGCACTGGCGCAATTAGTATGATATGTTTAC AGTTTGTTGATGGTAACCACCTTATATTATGTAACGTAGATGAGAATATTTTGTTTGCCATCTTCTGGGGTTATTCCTCT TCACAATCACCCTGGAATAACGGTTTTTAGTAAGCTTCTTTTTGGAACTATGCACATCAAATCATATATGATTGGGTCGT TGACTTGCCTCCTGAATCTCCTATCATTTTCAAACCCACAGAATGTAAGTACTTTATTTCCTGTTTTGTAATCTTTCCAT ATTGTACTATCCTCTACTTATTTGTGATGCTTTCGTACACTGGTACTTTTGCAACTGTAGGAGGGAGACAAGTTTAAATT TAGAATAGACATTAAATAGAAAAGGATAGTATTTTTTTAATGTGGGAAAATATAGAAGCTTAGAAGGAACATGCCATTGC CAAGTAGCATTGTGGTTGGACAAACCTATGAAATGTTAGTCATTAGCAAAAATCCCTGTTTTCTTTGTTGCTGTAATGAT ATTTAGACACCTAGGGACTCCAGAGACAACTAAACAGTGCAGGAACTCCACAACTCCACATACACCTCATTTTTCTCTTT ATTTCTCTTCTTTTATCATATAAATCATATATCATATTCATTACTTCCCTCTCTTCTCTTCATTTCTCACTCTAGGTGTC TGTTGGGTGTCTCCCCTATGCAGTTCAATCTTCTTAACTTCTTTTGTTAAATCTGGAAAATGTAAATAAATGACTTTATA CATTAGCATGTAAGAAAAGAGAAAAGTTCTCATTTTGACAATGACTAATGAGCTAGTACTGGTTGGTAATTTACTCATTC TATAGTAATTTTACCCTTTTAATTTTAAATTTGGTCTTCCTAGGCTCCTTCTTCTCCACTAAAAAACAGAAAACATTATA AAAGCAACTAACTTTCATGTTGTACTTATGCAGATCAGGCTCTGGAGATGCGGCTAGCAAAAGTTAAGGTTGATGCTGAT TTCACGGGTCCTTGCAACCCCTCTATCCTTTACCCTGAGGATGGGGGAAACATGCACTGTTTCACAGCAGTGACAGCGTG CATGCTTCTCGATGTTCTTGGTCCTCCATATTCGGATTATGAAGGCAGACACTGCACATACTACAACAATTACCCCTTTT CCAACATTTCAGGTAAATTGCCACTAATTTCGTATGTGCTTGAATACCGGTTGAATGCAACGTTGATAAACTTTTATTCC AATCATGATAAGAGTTTCGCTCAATTTTTATCTTGAAGTTTAGTGCTAAGGGCACCTTTTATGAAATTTCAGTAGAAGGA ATATCTATACCAGAAGAGGAAAGGAATGGTTATGAATGGCTACAAGAGAAGGAGCAACTTGAAGATTTAGAAGTTGATGG AAAAATGTACAGCGGCCCAAAGATTCATGAGAGCTAATCATTTTCTGTCACCCCAATATCTTCCAGTTCTTGTGACCACA TGTTGCTTTCAAATATTCCTACAGATCCATTTTCTTTTGTTTTTTGCAGTCAATGTTGCGGATTCGATGCCGCCTTTTTC GGTTCAGTAGAGAACAATACATCTGTGTTCTTGTACTTTTTTCTTCTTCTTTTGTTTATGGAACATTAGGCACTTGACAC TTGGTGCTGTTTTCAGTCTATAGTTCTTGTGTACATACCAATAAACAGAAAAGGGAAAAGGAGATAATGCTGCACAGGAA AATGAAGGGGCAATGAAATGAACTATTCGTCTGAAATTGAGCCTCATTTTTAGCATGCTTAGATCAGTTTCACTTTCATC AGAATCAATTGTGGTGTCCAGAAGCTACTTATAGAATTTTTTCCCCAAATTGATTTTGACTTCGGAGTCAAACCTAGAAA GATTTCCAAACATCTACTATCTTAGGCTGGCGGTTATTTACATTTAATTTTCTTTCAGATGATTCAGAGCTACTACACAA CTGATGAATTTTGTGAATTTGTGTAACACACTTCAGCTTCTACTGTGATTGGAAATAGAGATTGTGTTGAGTGCTAATAA TTCCCAGCAAGGCTTCATGATTTTTTTGTCTTCCATTTAGGCATGCGTGCTATAGTCGCTTCTCTGTCTACAATAGATTA CCTTCATTAGTATCAGATTAACTAACATCCCTCCATGATACCATCTAATACCAGAGATGTTGATACTGCTTCTGCAATGG TTAGTTTCTTGCATATTGTTTTCATTGAATTATAATTGATGATGTACATGTTTCATTGAATAGTTATTTCAAATTTTTGC AAGGTGAGTTTAATCAACTGAAGAGGTGATTGTGTATAGCTTTGGATGAAATAGGTCAGGGGACCGTCAGTGTCATTAGA GGTCTGGGTCTGGGTAGCCCTCTGAAACATGCAAGCTATAGTTAAGCAGAGCATACACAATGATTTGGTGTACCGGAGGT CCAAGAAAAAGAATGACCGCAGCACATCTAGCTCTAGATTTTTTGAATTTTTGTGATTATGTTGTTGGATAATTATGTCA AATAATTTGTGTTTTATCTTTGGATAATTATAGTTGGATAATTTGTGATTAAGTTATTAGATTTGTGTTTTAGGTTATCT TATGTTGTGTTATGTGTTGTTTGTGTTTTATGTTATGTTAAGGTGTGCTGTGTTAGAACAATGTTATAATAAAATTGGTT CATGC
CDS sequence (LotjaGi2g1v0257500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAGGATAAGTGAGAGGTTAGATGAAATTTCTGAAGAGAGGAGTAAGTTTCATTTGACTGAGATGGTTACCCAGAA AAGAGCTGAGTGGCGCCAAACCACCTCCATCATTGCTCAACCTCATGTCTATGGAAGAGATGAAGATAAGGATAGAATTG TAGACTTTTTGGTTGGTGATTCTTCGAGTTTCGAGGACTTAGTGGTCTATCCAATACTGGGTTTGGGTGGACTTGGAAAA ACAACACTTGCCCAAATTGTCTTCAATCATGAGAGGGTAGTCAACCACTTTGAACAAAGAATTTGGGTGTGCGTTTCGGA AGATTTCAGCTTGAAAAGAATGACAAAAGCTATCATAGAATCAGCATCCGGGCATGCCTGTGAGGATTTAGATCTAGACC CACTGCAGAGGAAACTTATAGATTTACTGCAAGGAAGAAGATATTTGATTGTTCTGGACGATGTGTGGGACGATGAACAA GAGAATTGGCTGAGGTTGAAATCTTTACTGATACATGGAGGTAAGGGTGCTTCAATTTTGGTCACTACTCGTCTCCAGAA AGTTGTAGCCATCATGGGAACAATGCCTCCTCATGAATTGTCAATGCTATCCAATGATGATTGTTGGGAATTGTTTAAAC AACGAGCATTTGGACCGAGCGAGGTAGAACGTGCAGAGCTTGTGGGCATAGGAAAGGAAATAGTAAAGAAGTGTGGGGGA GTGCCTCTTGCAGCAATAGCAATAGGAAGTCTCTTGCGCTTTAAAAGAGAGGAGAAAGAATGGCTCCGTATCAAGGAAAG CAAACTGTGGAGCTTGGAAGGTGAGAACTTTGTCATGCCTTCCTTGATACTAAGTTACTTGAACTTGCCCTTAAAATTGA GACAATGTTTTTCCTTCTGTGCATTATTTCCCAAAGATGAAATAATAAGCAGGCAGTTTCTAATTGAACTTTGGATGGCT AATGGATTGGTTTCGTCCAATGAAATGGTGGATGCAGAGGATATCGGAGATGAGTTATTTAATGAATTATATTGGAGATC AATTTTCCAAGATATTAAGACAGATGAATTTGGCAAAATTACAAGTTTCAAGATGCATGATCTTGTTCATGATCTTGCTC AATATGTTGCCGAGGAAGTCTGTTGCAGTGCAGTTAATAATGGTATAGCTGATGTGTCTGAAGGAATCCGGCACCTATCA TTTTATAGGATAGCCTCATGGAAACAGGAAGTTAGTTCAATCCAGTCGGGTCGATTCAAATCTTTGAAGACCTGCATATT AGGGGAACATGTTTATCTATTTGGGGGTCGTTCAGTAGAGGCATTGAAATCTAATTCTTTGCGGATGCTTAACTACCACC GCCTAGGAAGTTTGTCAACTTCAATTGGTCGTTTCAAATATCTAAGACACTTAGATATCTCTTCCGGATCGTTCAAATCT CTTCCGGAATCCCTTTGCATGCTCTGGAATTTGCAGATTTTGAAATTAGACAATTGTCGTTATCTGAAAAAGTTACCTGC TAGTTTGGTACGCCTAAAAGCTCTACAGCATCTATCATTGATTGGCTGCTATTCTTTATCAAGATTTCCCCCTCAAATGG GGAAGTTGACTTGTCTAAGGACTTTAAGCATGTATTTTGTTGGCAAGGAAGAAGGGTTCCAGTTGGCAGAATTGGGACGG TTGAACCTTAAAGGACAACTTCACATCAAGCACCTGGAGAAAGTAAAAAGTGTAATTGATGCTCAAGAAGCCAACATGTC GAGTAAGCACCTGAATAATTTGCAGTTGTCATGGGGGAGAAATGAAAACTGCCAATCACAGGAAAATGTTGAGCAGATTC TTGAAGTGCTTCAACCGCATACCCAACAACTTCAAATTCTTGCTGTGGAAGGATATACAGGTGCATGTTTCCCACAATGG ATGTCCAGTCTTTCTCTCAAATATTTAAATTCTTTAGAACTTGTGGATTGCAAAAGCTGCTTAAACCTTCCGCAGCTAGG GAAACTACCTTCTCTGAAGTATCTAAGTATATCCAACATGAGTCGTGAAATAATATACTTATACGAGGAGTCCTGTGCTG ATGGAATTTTCATAGCTCTGGAATCTCTTATACTGGAGAAGATGCCGAACTTGAAAAAGTTATCAAGGGAGGATGGAGAA AACATGTTCCCGCACCTTTCAGATCTTGAAATTATTGAATGTCCTCAATTGTTAGGGCTTCCACGCCTTCCATCTATGAA CAGTCTAACTATACGGGGGGAAGGAAACCTGGATTTACTAAATTCAATTTATCAATTTGGTAGTCTTGAACAGCTATATT TGGGAGGAAACAAAGAGCTAACTTGCTTTCCAAATGGGATGCTAAGTAACCTTTCTTCTCTAAAGAGACTGCACATTTTT GGGTGCTCCAAACTTGAGGAGTTACTCCCAAATGAAGTCGTTAACCTTGGTGCTCTCCAACAACTGGACATAAAACATTG CCAGAGCCTCAATTCATTAACAAATGGAGTATTGCAAGGGTTGCACTCTCTCAAGAAATTAGTTATTGTGGGGAGCATAA GTTCAATATGTCAGCAGGTTTTCAATACCTTACTTGCCTTGAGCAGTTGGCGATTCATGGTTGCTCAAAAATTGAAGGAT TACAGGAGGCTTTACAGCATGTGA
Protein sequence (LotjaGi2g1v0257500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKRISERLDEISEERSKFHLTEMVTQKRAEWRQTTSIIAQPHVYGRDEDKDRIVDFLVGDSSSFEDLVVYPILGLGGLGK TTLAQIVFNHERVVNHFEQRIWVCVSEDFSLKRMTKAIIESASGHACEDLDLDPLQRKLIDLLQGRRYLIVLDDVWDDEQ ENWLRLKSLLIHGGKGASILVTTRLQKVVAIMGTMPPHELSMLSNDDCWELFKQRAFGPSEVERAELVGIGKEIVKKCGG VPLAAIAIGSLLRFKREEKEWLRIKESKLWSLEGENFVMPSLILSYLNLPLKLRQCFSFCALFPKDEIISRQFLIELWMA NGLVSSNEMVDAEDIGDELFNELYWRSIFQDIKTDEFGKITSFKMHDLVHDLAQYVAEEVCCSAVNNGIADVSEGIRHLS FYRIASWKQEVSSIQSGRFKSLKTCILGEHVYLFGGRSVEALKSNSLRMLNYHRLGSLSTSIGRFKYLRHLDISSGSFKS LPESLCMLWNLQILKLDNCRYLKKLPASLVRLKALQHLSLIGCYSLSRFPPQMGKLTCLRTLSMYFVGKEEGFQLAELGR LNLKGQLHIKHLEKVKSVIDAQEANMSSKHLNNLQLSWGRNENCQSQENVEQILEVLQPHTQQLQILAVEGYTGACFPQW MSSLSLKYLNSLELVDCKSCLNLPQLGKLPSLKYLSISNMSREIIYLYEESCADGIFIALESLILEKMPNLKKLSREDGE NMFPHLSDLEIIECPQLLGLPRLPSMNSLTIRGEGNLDLLNSIYQFGSLEQLYLGGNKELTCFPNGMLSNLSSLKRLHIF GCSKLEELLPNEVVNLGALQQLDIKHCQSLNSLTNGVLQGLHSLKKLVIVGSISSICQQVFNTLLALSSWRFMVAQKLKD YRRLYSM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 716 | 716 | 1.5E-159 | – | |
| PANTHER | 1 | 716 | 716 | 1.5E-159 | – | |
| Gene3D | 24 | 195 | 172 | 1.4E-37 | – | |
| SUPERFAMILY | 29 | 300 | 272 | 3.96E-66 | ||
| Pfam | 47 | 266 | 220 | 2.4E-48 | ||
| PRINTS | 69 | 84 | 16 | 1.4E-18 | – | |
| PRINTS | 142 | 156 | 15 | 1.4E-18 | – | |
| PRINTS | 238 | 252 | 15 | 1.4E-18 | – | |
| SUPERFAMILY | 349 | 750 | 402 | 3.57E-28 | – | |
| SUPERFAMILY | 700 | 862 | 163 | 3.84E-13 | – | |
| Gene3D | 747 | 879 | 133 | 1.5E-13 | ||
| PRINTS | 814 | 830 | 17 | 1.4E-18 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0257500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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