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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0264800 |
| Transcript ID | LotjaGi2g1v0264800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7IZD1|G7IZD1_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi2g1v0264800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:73438570..73442210) extracted from Lotus japonicus Gifu genome v1.2.
CAAAATATCTCTTATCTTTGTTAATCTGATTGCTTGATACTAACCTACCTCTGCATTTTTCAACTGTACAAACTGTTGCA TTTCAGTTTGCTAGTAAAATTGTAGAAGATGGCAGAGGCTGTACTTGAAGTTGTGCTTGAGAATTTGAGCTCACTCATTC AGAAGGAGCTTGGCCAGTTTCTGGGTTTTGATGAAGAATTGACAAGGCTCTCTAGCACGCTCACTGCAATCAAGGCAACA CTTGAAGATGCTGAGGAGAAACAATTCACTGATAGAGCTATTAAGGTTTGGCTGCAAAAGCTAAGAGATGCTGCTCATGT TCTGGATGACATCTTGGACGAGTGTGCCACTGAAGCATTGAAGATGGAGAATGGAGGATTCATGTGTGGTTTATCAGACA AGGTGCAAAGCTCTTGCTTATTCTCTTTTCATCCCAAGCATGTTGTCTTCCGTTGTACAATTGCTAAGAAAATGAAGATG ATAAGGGAGAGATTAGATGAAGTTGCTCAAGAGAGGACTAGGTTTCATTTAACTGAGATGGCTACACAAAAAAGAGCTGA TTGGCGCCAAACCACCTCAATCATCACTCAACCTCAAGTCTATGGAAGAGAAGAAGATAGGACTAAAATTTTAGACTTTT TGGTTGGTGATGCTTCTGGTTTTGAGGATTTAGCAGTCTATCCAATACTAGGTCTAGGTGGACTTGGAAAAACAACACTT GCTCAACTTATCTTCAATCATGAGAGGGTAGTCAACCACTTTGAACAAAGAATTTGGGTGTGTGTTTCAGAAGATTTCAG TTTGAAAAGAATGACTAAAGCTATCATAGAATCAGCATCCGGGCATGCCTGTGCCGATTTAGAGCTAGAGCCACTGCAGA GAAAACTTATAGATTTACTGCAAAGAAAAAGATATTTGCTTGTTTTGGACGATGTGTGGGACGATGAACAAGAGAATTGG CTGAGGTTGAAACCTGTACTAGCAAGTGGAGGAAAGGGTGCTTCAATTTTGGTAACTACTCGTCTCCCAAAAGTCGCAGC AATCATGGGAACAATGCCTTCTCATAAATTATCAATGCTGTCTGATAGTGATTGTTGGGAATTGTTTAAACAACGAGCAT TTGGACCAAATGAGGTGGAACCGACAGAGCTTGTGGGCATAGGGAAGGAGATAGTGAAGAAGTGTGGGGGAGTTCCTCTT GCAGCAATAGCACTCGGAAGTCTTTTGCGCTTTAAAAGAGAGGAAAAAGAATGGCTCTATGTGAAGGAAAGCAAACTGTG GAGTTTACAAGGTGAGAATTCGGTCATGCCTGCCTTGAGACTAGGTTACTTGAACTTACCCGTCAATTTGAGACAGTGTT TTGCCTTCTGTGCATTATTTCCCAAAGATGAAATAATTAGTAAACACACACTAATCAATCTTTGGATGGCTAATGGATTG ATTCCGTCCAATGAAATGTTGGATGCTGAAGACATTGGAGATGAGTTTTGGAATCAATTATATTGGAGATCATTTTTCCA AGATATTATGACAGATGAACTTGGCAAAGTTACAACTTTCAAGATGCATGATCTTATTCATGATCTTGCACAATCTGTTA CTGAAGAAGTCTGTTGCAGTGCAGTTAATAATAGTACAATTGATGTATCTGAAAGAATCCGCCACCTCTCAATTTATGGG CAAAACTCATTCCAGGAAGCTAATGTAATCCAGTTGCACCGGTTCAAATCTTTGAAGACCTGTATAGTGAGGGAAAGTTG TTATGGTGGCAAAATTTTACCTCAGGTATTTAAATGTTATTCTTTGCGGGTGCTTGACTTCAGAGGATTAGAAAATTTGT CAACTTCAATTGGCCATTTGAAATATTTAAGATACTTAGATATCTCTTTCGGAAAGTTCAAATCTCTTCCAGAATCCCTT TGCAGGCTCTGGAATTTGCAGATTTTGAAATTAGACCATTGTAGTAGGCTACAAAAGTTACCTGCTAGTTTGGTGCGCTT AAAAGCTCTACGACATCTATCCTTGAGGCATTGTCACTCTTTATCAAGATTGCCTCCTCAAATGGGGAAGTTGACTTGTC TAAGGACTTTAAACATGTATTTTGTTGGCAAGGAAAAAGGGTTCCACTTGGCTGAATTGGGACAACTGAACCTTAAGGGA GAGCTTCATATCAAGCACTTGGAGAGAGTAAAAAGCGTAATGGACGCCAAAGAAGCCAACATGTCAAGAAAGCACCTGAA CCACTTGCAGTTGTCATGGGGCAAAGATCAAGAGTCCCAATCACAGGAAAATGTTGAGCATATACTTGAATGGCTTCAAC CTCATACCCAAAAACTGCAAACTCTGCTTGTGAGTGGATATACAGGAGCCTATTTCCCACAATGGATGTCCAGCTCTTCT CTCAAATATTTAGATTCTTTAGAACTTGTAGATTGCAAAAGCTGTTTACACCTTCCGCAGCTAGGGAAACTGCCTTGTCT GAAGTATCTAAGGATATGTAACATGAGTCGCGCAAAGTACTTATATGAGGAATCATGTGATGCAGGAATTTTCATAGCTC TGGAATATCTGATACTAGAGAAGATACCAAACCTGATAAGGTTATCAAGGGAGGATGGAGTAAACATGTTCCCAAGCCTT TCAAAAATTAAAATGACTGAATGTCCTCAACTTTTGGGCCTGCCGTGCCTTGTATCTCTCAAGAGTCTACAGATAGAGGG GAAATGCAACCAATATTTACCAAGTTCAATTTGTAACTTCCCTCGTCTTGAACACCTGTACTTTGGAGGGAATGACGAGC TAACTTGCTTTCCAAGTGGAATGCTAAGTAGAAACCTTACTTCTCTAAAGAGACTTGAAATTAATGGATACTCCAAACTT GAGGAGCTACTCCCAAATGAAATTGTTAACCTTGCTGTGCCCCAACACCTGATTATATACCGTTGCGAGAGCCTCAAGTC GTTAACAAACGGAGTATTGCGAGGGTTTCACTCTCTCAAGATATTAGCTATTTGTTGGTGCCCTGAGTTCAATCTGTCAG CAGGTTTTCAATACCTAACATCCCTTGAGAAGTTGATGATTGATAATTGCGCCGAAATGAAGGGTTTACATGAGGCTTTA CAACGTATGACTACACTTCAAAACTTAATATTGTCTAATCTTCCAAGCCTAGAATCTCTGCCTGCTTACTTGGGAAACCT TAGCTCGCTTCAGTCATTAACCATCTCCGGGTGTCCCAAGTTGACGTGTCTTCCAATGAGCATTCAATGCCTTAGCTGTC TAGAACGGTTGCAGATTGAAGGTTGCAAAGAGTTAGGGAAGCGATGTCAGAAGGAAATAGGGGAGGATTGGCCTAAAATA GCTCATGTTCCACATGTTGAGGTGATGGACAAGCAATTGCTTATCAAATCTTACTAATTTCATGCATTTGTAACTTTGTG ATCTTTCATGATTTCCTTCATTTGAAATATTATTCCTCTCTAATTTTGTGTATTATACAGCATTGGAATGACTGTGGATA TAATTTTAATTTGTTTGTGAGCATAAACACTGCTGTTATATTCAATTGGGATTTCTTTTTTCTATTGTTGGTTTTGATCT GTTCAGTGTTAACCATAAAAATCTGTATGCAACTACATGGA
CDS sequence (LotjaGi2g1v0264800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAGGCTGTACTTGAAGTTGTGCTTGAGAATTTGAGCTCACTCATTCAGAAGGAGCTTGGCCAGTTTCTGGGTTT TGATGAAGAATTGACAAGGCTCTCTAGCACGCTCACTGCAATCAAGGCAACACTTGAAGATGCTGAGGAGAAACAATTCA CTGATAGAGCTATTAAGGTTTGGCTGCAAAAGCTAAGAGATGCTGCTCATGTTCTGGATGACATCTTGGACGAGTGTGCC ACTGAAGCATTGAAGATGGAGAATGGAGGATTCATGTGTGGTTTATCAGACAAGGTGCAAAGCTCTTGCTTATTCTCTTT TCATCCCAAGCATGTTGTCTTCCGTTGTACAATTGCTAAGAAAATGAAGATGATAAGGGAGAGATTAGATGAAGTTGCTC AAGAGAGGACTAGGTTTCATTTAACTGAGATGGCTACACAAAAAAGAGCTGATTGGCGCCAAACCACCTCAATCATCACT CAACCTCAAGTCTATGGAAGAGAAGAAGATAGGACTAAAATTTTAGACTTTTTGGTTGGTGATGCTTCTGGTTTTGAGGA TTTAGCAGTCTATCCAATACTAGGTCTAGGTGGACTTGGAAAAACAACACTTGCTCAACTTATCTTCAATCATGAGAGGG TAGTCAACCACTTTGAACAAAGAATTTGGGTGTGTGTTTCAGAAGATTTCAGTTTGAAAAGAATGACTAAAGCTATCATA GAATCAGCATCCGGGCATGCCTGTGCCGATTTAGAGCTAGAGCCACTGCAGAGAAAACTTATAGATTTACTGCAAAGAAA AAGATATTTGCTTGTTTTGGACGATGTGTGGGACGATGAACAAGAGAATTGGCTGAGGTTGAAACCTGTACTAGCAAGTG GAGGAAAGGGTGCTTCAATTTTGGTAACTACTCGTCTCCCAAAAGTCGCAGCAATCATGGGAACAATGCCTTCTCATAAA TTATCAATGCTGTCTGATAGTGATTGTTGGGAATTGTTTAAACAACGAGCATTTGGACCAAATGAGGTGGAACCGACAGA GCTTGTGGGCATAGGGAAGGAGATAGTGAAGAAGTGTGGGGGAGTTCCTCTTGCAGCAATAGCACTCGGAAGTCTTTTGC GCTTTAAAAGAGAGGAAAAAGAATGGCTCTATGTGAAGGAAAGCAAACTGTGGAGTTTACAAGGTGAGAATTCGGTCATG CCTGCCTTGAGACTAGGTTACTTGAACTTACCCGTCAATTTGAGACAGTGTTTTGCCTTCTGTGCATTATTTCCCAAAGA TGAAATAATTAGTAAACACACACTAATCAATCTTTGGATGGCTAATGGATTGATTCCGTCCAATGAAATGTTGGATGCTG AAGACATTGGAGATGAGTTTTGGAATCAATTATATTGGAGATCATTTTTCCAAGATATTATGACAGATGAACTTGGCAAA GTTACAACTTTCAAGATGCATGATCTTATTCATGATCTTGCACAATCTGTTACTGAAGAAGTCTGTTGCAGTGCAGTTAA TAATAGTACAATTGATGTATCTGAAAGAATCCGCCACCTCTCAATTTATGGGCAAAACTCATTCCAGGAAGCTAATGTAA TCCAGTTGCACCGGTTCAAATCTTTGAAGACCTGTATAGTGAGGGAAAGTTGTTATGGTGGCAAAATTTTACCTCAGGTA TTTAAATGTTATTCTTTGCGGGTGCTTGACTTCAGAGGATTAGAAAATTTGTCAACTTCAATTGGCCATTTGAAATATTT AAGATACTTAGATATCTCTTTCGGAAAGTTCAAATCTCTTCCAGAATCCCTTTGCAGGCTCTGGAATTTGCAGATTTTGA AATTAGACCATTGTAGTAGGCTACAAAAGTTACCTGCTAGTTTGGTGCGCTTAAAAGCTCTACGACATCTATCCTTGAGG CATTGTCACTCTTTATCAAGATTGCCTCCTCAAATGGGGAAGTTGACTTGTCTAAGGACTTTAAACATGTATTTTGTTGG CAAGGAAAAAGGGTTCCACTTGGCTGAATTGGGACAACTGAACCTTAAGGGAGAGCTTCATATCAAGCACTTGGAGAGAG TAAAAAGCGTAATGGACGCCAAAGAAGCCAACATGTCAAGAAAGCACCTGAACCACTTGCAGTTGTCATGGGGCAAAGAT CAAGAGTCCCAATCACAGGAAAATGTTGAGCATATACTTGAATGGCTTCAACCTCATACCCAAAAACTGCAAACTCTGCT TGTGAGTGGATATACAGGAGCCTATTTCCCACAATGGATGTCCAGCTCTTCTCTCAAATATTTAGATTCTTTAGAACTTG TAGATTGCAAAAGCTGTTTACACCTTCCGCAGCTAGGGAAACTGCCTTGTCTGAAGTATCTAAGGATATGTAACATGAGT CGCGCAAAGTACTTATATGAGGAATCATGTGATGCAGGAATTTTCATAGCTCTGGAATATCTGATACTAGAGAAGATACC AAACCTGATAAGGTTATCAAGGGAGGATGGAGTAAACATGTTCCCAAGCCTTTCAAAAATTAAAATGACTGAATGTCCTC AACTTTTGGGCCTGCCGTGCCTTGTATCTCTCAAGAGTCTACAGATAGAGGGGAAATGCAACCAATATTTACCAAGTTCA ATTTGTAACTTCCCTCGTCTTGAACACCTGTACTTTGGAGGGAATGACGAGCTAACTTGCTTTCCAAGTGGAATGCTAAG TAGAAACCTTACTTCTCTAAAGAGACTTGAAATTAATGGATACTCCAAACTTGAGGAGCTACTCCCAAATGAAATTGTTA ACCTTGCTGTGCCCCAACACCTGATTATATACCGTTGCGAGAGCCTCAAGTCGTTAACAAACGGAGTATTGCGAGGGTTT CACTCTCTCAAGATATTAGCTATTTGTTGGTGCCCTGAGTTCAATCTGTCAGCAGGTTTTCAATACCTAACATCCCTTGA GAAGTTGATGATTGATAATTGCGCCGAAATGAAGGGTTTACATGAGGCTTTACAACGTATGACTACACTTCAAAACTTAA TATTGTCTAATCTTCCAAGCCTAGAATCTCTGCCTGCTTACTTGGGAAACCTTAGCTCGCTTCAGTCATTAACCATCTCC GGGTGTCCCAAGTTGACGTGTCTTCCAATGAGCATTCAATGCCTTAGCTGTCTAGAACGGTTGCAGATTGAAGGTTGCAA AGAGTTAGGGAAGCGATGTCAGAAGGAAATAGGGGAGGATTGGCCTAAAATAGCTCATGTTCCACATGTTGAGGTGATGG ACAAGCAATTGCTTATCAAATCTTACTAA
Protein sequence (LotjaGi2g1v0264800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEAVLEVVLENLSSLIQKELGQFLGFDEELTRLSSTLTAIKATLEDAEEKQFTDRAIKVWLQKLRDAAHVLDDILDECA TEALKMENGGFMCGLSDKVQSSCLFSFHPKHVVFRCTIAKKMKMIRERLDEVAQERTRFHLTEMATQKRADWRQTTSIIT QPQVYGREEDRTKILDFLVGDASGFEDLAVYPILGLGGLGKTTLAQLIFNHERVVNHFEQRIWVCVSEDFSLKRMTKAII ESASGHACADLELEPLQRKLIDLLQRKRYLLVLDDVWDDEQENWLRLKPVLASGGKGASILVTTRLPKVAAIMGTMPSHK LSMLSDSDCWELFKQRAFGPNEVEPTELVGIGKEIVKKCGGVPLAAIALGSLLRFKREEKEWLYVKESKLWSLQGENSVM PALRLGYLNLPVNLRQCFAFCALFPKDEIISKHTLINLWMANGLIPSNEMLDAEDIGDEFWNQLYWRSFFQDIMTDELGK VTTFKMHDLIHDLAQSVTEEVCCSAVNNSTIDVSERIRHLSIYGQNSFQEANVIQLHRFKSLKTCIVRESCYGGKILPQV FKCYSLRVLDFRGLENLSTSIGHLKYLRYLDISFGKFKSLPESLCRLWNLQILKLDHCSRLQKLPASLVRLKALRHLSLR HCHSLSRLPPQMGKLTCLRTLNMYFVGKEKGFHLAELGQLNLKGELHIKHLERVKSVMDAKEANMSRKHLNHLQLSWGKD QESQSQENVEHILEWLQPHTQKLQTLLVSGYTGAYFPQWMSSSSLKYLDSLELVDCKSCLHLPQLGKLPCLKYLRICNMS RAKYLYEESCDAGIFIALEYLILEKIPNLIRLSREDGVNMFPSLSKIKMTECPQLLGLPCLVSLKSLQIEGKCNQYLPSS ICNFPRLEHLYFGGNDELTCFPSGMLSRNLTSLKRLEINGYSKLEELLPNEIVNLAVPQHLIIYRCESLKSLTNGVLRGF HSLKILAICWCPEFNLSAGFQYLTSLEKLMIDNCAEMKGLHEALQRMTTLQNLILSNLPSLESLPAYLGNLSSLQSLTIS GCPKLTCLPMSIQCLSCLERLQIEGCKELGKRCQKEIGEDWPKIAHVPHVEVMDKQLLIKSY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 2 | 133 | 132 | 1.45333E-16 | ||
| Pfam | 5 | 97 | 93 | 5.7E-23 | ||
| PANTHER | 30 | 1078 | 1049 | 3.2E-180 | – | |
| PANTHER | 30 | 1078 | 1049 | 3.2E-180 | – | |
| Coils | 31 | 51 | 21 | - | – | |
| Gene3D | 144 | 317 | 174 | 2.6E-37 | – | |
| SUPERFAMILY | 150 | 421 | 272 | 2.28E-65 | ||
| Pfam | 187 | 387 | 201 | 3.2E-48 | ||
| PRINTS | 190 | 205 | 16 | 7.8E-18 | – | |
| PRINTS | 263 | 277 | 15 | 7.8E-18 | – | |
| PRINTS | 359 | 373 | 15 | 7.8E-18 | – | |
| SUPERFAMILY | 470 | 944 | 475 | 4.76E-39 | – | |
| Gene3D | 475 | 666 | 192 | 3.2E-23 | ||
| Gene3D | 672 | 859 | 188 | 1.7E-12 | ||
| SUPERFAMILY | 860 | 1088 | 229 | 1.87E-24 | – | |
| Gene3D | 860 | 954 | 95 | 6.7E-14 | ||
| PRINTS | 908 | 924 | 17 | 7.8E-18 | – | |
| Gene3D | 955 | 1073 | 119 | 7.8E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0264800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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