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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0272400 |
| Transcript ID | LotjaGi2g1v0272400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP sulfurylase (Sulfate adenylyltransferase); TAIR: AT1G19920.1 Pseudouridine synthase/archaeosine transglycosylase-like family protein; Swiss-Prot: sp|Q43870|APS2_ARATH ATP sulfurylase 2; TrEMBL-Plants: tr|I1LWX5|I1LWX5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0272400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:74330457..74334089) extracted from Lotus japonicus Gifu genome v1.2.
GGTGTGAGGAGCTCGTTGATAGAGCCTGATGGAGGGGCATTGGTGGATCTTGTGGTGCCGGAGAGCCAGAGGGGGTTGAA GGCGGTGGAGGCGGAGGCGCTGCCGAAGGTGCGGCTGACGAGGGTTGATCTTGAGTGGGTACATGTGATTGGGGAAGGGT GGGCTAGTCCTTTGAGGGGTTTCATGAGGGAGGATGAGTATTTGCAGAGCTTGCATTTCAATTCCATGAGAGTGGAGGGT GGTGGTGGTGGTGGTGGTGGTTCTGTGGTGAACATGTCGCTTCCCATTGTGTTGGCTATTGATGATGAGACTAAGGGTCA AATTGGGTCGTCGTCAAATGTGAGTTTGATTGGGCCTGATGGTGATTGTGTTGCAATTCTTAGAAGGTTAGTCTTCTTTT TTCTGCCATTTTTTTTTTCTGGTTAATTGGTGTTTTCTAGTTAATTATTCAGTTGTTATTTACATGAGTTTTAGCTTATA GTTTAATGATTACAATTTACAAGTGTAGAAAGGAACAGATTCTCAAGTGTTGGGGTTGGTTCAACTGGGTATTGGATCAC AGATTAAAAGACTTAAGTTTGATTCACAAAAATTGTCTATTGACTTATGTTTGTTGAATTTCACATTTTTTTACATGTCC TGCATGTTAATAATCCCCTTGAGTTGGTGCATGTGGATTCGAAATGCCAAACTAGCTGAGCAAGATAGTTTATATATGAA TTCTTTGGTGATGATGGTAGTAAACTGCAAGTTAGAAGCATTGTGTGGTGGAGGTACTTCCAGTGCTTGAACTTGTTTAC AAACAAAATGACAGAGTACTTTATGTTGGGTATGTTCATGAGAGAGTTAGAAGGTAATGGAATGGGGCTTGGTTTTTTTA TAAAAAGGTATGGTGGGGGAAGATAAAATTCCAGAAGTAGGTTATGGTATGTGGTTATGGAATCATTTCGAATGGTCACA AGATAAATCAGTGGCTACCATGTGATCATGGATCAGAAGCACCAGTATCTAGTGTCTGTTCTTCAGAGACATGGATTTGA AATTCGAAGGGTCGTACCGGACAGGACAGCGTTACTTCGAAAACTTCCATGGGAGATTTCATTATGTGCATGCTCCGGGT TAACACGTAATTGCATTTCTTCTAGGCATGCTCTGGGTTACCTGAAGAGTTAAGGGAATAAGGTGAAAAGGTATCAACAT GCAGGGGAAGCATGCTGCTCTGATACTATATAAAGTTGAACAATAAGCATTCTCACTTGTCTGTTTGAACTGTACATGAC TATGACTTTATACAGCTAAGAACCTTAGTCGCAGGCTAAGGAAAAGGCTGAGTGAAAGACATGAAGTAATAATTTCTATG AAATATTGACTTATCATAAGTTACATGCTTTTTTGACATGTCTCACATGTTCATTTCACATGCCTTCAACTTTCAGTCTT CTATTTTGCATTTAGTGTAAGTCATGCAGTCATCTTGAAATTAAGAAAGTTGAATTGCCCTGGCTATCTAAATAAATCCC TGTCGTGGTCTCTTTTACCTTTAATTAACCATTAAACTCCTATGCAGTATTCAAATCTACAAGCATAACAAGGAAGAAAG AATAGCTAGAACTTGGGGAACAACTGCACCAGGATTGCCATATGTTGAAGAGGTGATTACCCCAGCTGGAAATTGGCTTA TTGGAGGAGATTTGGAATTGCTAAAACCTATCAAATATAATGATGGTCTTGATCACTACAGGCTCTCACCCAAACAACTT CGTGAGGAATTCGATAGGCGTGAAGCTGATGCAGTTTTTGCCTTTCAGTTAAGAAATCCAGTGCACAATGGCCATGCCTT GTTAATGAACGATACGCGTAATCGCCTGTTGGAAATGGGTTACAAAAATCCAATCTTATTGCTTCATCCTCTTGGAGGTT TCACAAAGGCTGATGATGTGCCCTTAGATGTCAGGATGGAGCAACATAGCAAGGTAGTTTCCATTGTTCTTATATGACAT GGAGTATTAACAATGTTCATGTGCCTATGATAATATATGCTTAGAAATGACCTTGTAAGTGATTAAGCTGTCATTTAATT TCAGCAACCTGTTTATTTGTAATTGCTCAGTCCACGGAATTTTATCCACTTAATATCAAGTTCTTTTTAGTATACATTGA TTCAGTTAACCGACCTCGCCTAGCGCGAAAAAACTTGGATGAAGATATAAAGTTATTTTTTTGTTCTTAGGTCCTAGAAG ATGGAGTTCTTGATCCAGAGACTACCATAGTTTCTATCTTTCCATCACCTATGCATTATGCTGGTCCAACGGAAGTGCAG TGGCACGCCAAGGCACGAATAAATGCAGGTGCTAACTTCTATATTGTTGGTCGTGATCCTGCTGGTATGGGTCACCCGAC TGAGAAAAGGGATTTGTACGACCCTGATCACGGGAAAAAGGTGCTCAGCATGGCTCCTGGTCTTGAGAAGCTTAACATTT TGCCATTCAGGGTATATTTTCTTACTTTCACGCATGGCTATAGGTTCTGGTTCCTCTATGAAATATGTTCTTTGAATGGC TTCTTCTTCACAATGCTTTGTGATGCATGTCATGTTGCTTATTATTTGAGTTGTGAAATGACATGATTTCCTTGTTCATT AATATACGACATTACTTTATGAAGTTTAAGTGTTTAATACGCTACCAAGAAGTATGCTGATGAGATTTTGTTTTATTTAA TGACGATTCAGAAAATACTTATGTCTTCTACCTTGTTTGCCATTTTAAATTACAGGTGGCAGCTTATGACACTAAGGACA AAAAGATGGCATTTTTTGATCCAACCCGTTCTCAAGATTTCCTATTTATATCAGGAACCAAGGTATTTGATTTCTTTATT CATTATCATTCACTAATGTATTTCAAGCTCCATCAACCTTAACTTTGGAACTTGTGATTAATAGTTATTTATTAAATTAG TATATAGCCAATGTATTATATTAGGTTATAATGGCAGATCCTGGTTCCCTTTATTCCTTGAAGTTGGCTACAACTTAAAC AAAAGTAATTTACATTGGAACTTGGAAGTAATAAAGTTGGGCATAAAGAACAGCATTGGGGTTTTACTATGTATGACGAT AATATGTAAAATGCAAAATATTAATAAGATGTTTCTTGTGGATGTGGGCATTCGCCTGTAAGGGCACCCTTAGATCTTGT TCATTCAGTTTTCACACATGTATCATCAAGTTGGTATCTGAAGTCATTTGACATTGGATAACTGCTCTTCACAATTTTGT TAATATTTTCTTGGTTTGATTTATTTTTCCAGATGCGGGCTTATGCAAGAAGCGGGGAGAATCCACCAGATGGATTTATG TGCCCAAGTGGATGGAAGGTTCTTGTTAATTATTATAAAAGTTTGCAGGCGGAAGAGGCAGCACAACAGCCTGTGCTATC TGCTTAGACATAACTAGGAATTTTTGCATTAATTGGTTCCAAAGGAAGAGTGTTAAGGGTACAGTTCCAGGAGTGCCAAT TTTGATGCATGGTCTTCCAGCTTCATGGTCAAGAATTCAGCAATGCGCAAGCATATTTTAGTTTTTTTTTAATCCAATGA TTCATCTTTGGTTTCCTTATGAAGTTACTATGA
CDS sequence (LotjaGi2g1v0272400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGGAGGATGAGTATTTGCAGAGCTTGCATTTCAATTCCATGAGAGTGGAGGGTGGTGGTGGTGGTGGTGGTGGTTC TGTGGTGAACATGTCGCTTCCCATTGTGTTGGCTATTGATGATGAGACTAAGGGTCAAATTGGGTCGTCGTCAAATGTGA GTTTGATTGGGCCTGATGGTGATTGTGTTGCAATTCTTAGAAGTATTCAAATCTACAAGCATAACAAGGAAGAAAGAATA GCTAGAACTTGGGGAACAACTGCACCAGGATTGCCATATGTTGAAGAGGTGATTACCCCAGCTGGAAATTGGCTTATTGG AGGAGATTTGGAATTGCTAAAACCTATCAAATATAATGATGGTCTTGATCACTACAGGCTCTCACCCAAACAACTTCGTG AGGAATTCGATAGGCGTGAAGCTGATGCAGTTTTTGCCTTTCAGTTAAGAAATCCAGTGCACAATGGCCATGCCTTGTTA ATGAACGATACGCGTAATCGCCTGTTGGAAATGGGTTACAAAAATCCAATCTTATTGCTTCATCCTCTTGGAGGTTTCAC AAAGGCTGATGATGTGCCCTTAGATGTCAGGATGGAGCAACATAGCAAGACTACCATAGTTTCTATCTTTCCATCACCTA TGCATTATGCTGGTCCAACGGAAGTGCAGTGGCACGCCAAGGCACGAATAAATGCAGGTGCTAACTTCTATATTGTTGGT CGTGATCCTGCTGGTATGGGTCACCCGACTGAGAAAAGGGATTTGTACGACCCTGATCACGGGAAAAAGGTGCTCAGCAT GGCTCCTGGTCTTGAGAAGCTTAACATTTTGCCATTCAGGGTGGCAGCTTATGACACTAAGGACAAAAAGATGGCATTTT TTGATCCAACCCGTTCTCAAGATTTCCTATTTATATCAGGAACCAAGATGCGGGCTTATGCAAGAAGCGGGGAGAATCCA CCAGATGGATTTATGTGCCCAAGTGGATGGAAGGTTCTTGTTAATTATTATAAAAGTTTGCAGGCGGAAGAGGCATTACT ATGA
Protein sequence (LotjaGi2g1v0272400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MREDEYLQSLHFNSMRVEGGGGGGGGSVVNMSLPIVLAIDDETKGQIGSSSNVSLIGPDGDCVAILRSIQIYKHNKEERI ARTWGTTAPGLPYVEEVITPAGNWLIGGDLELLKPIKYNDGLDHYRLSPKQLREEFDRREADAVFAFQLRNPVHNGHALL MNDTRNRLLEMGYKNPILLLHPLGGFTKADDVPLDVRMEQHSKTTIVSIFPSPMHYAGPTEVQWHAKARINAGANFYIVG RDPAGMGHPTEKRDLYDPDHGKKVLSMAPGLEKLNILPFRVAAYDTKDKKMAFFDPTRSQDFLFISGTKMRAYARSGENP PDGFMCPSGWKVLVNYYKSLQAEEALL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 345 | 345 | 1.7E-226 | – | |
| SUPERFAMILY | 1 | 120 | 120 | 5.07E-24 | ||
| CDD | 1 | 336 | 336 | 2.74058E-140 | ||
| TIGRFAM | 1 | 334 | 334 | 2.1E-102 | ||
| PANTHER | 1 | 345 | 345 | 1.7E-226 | – | |
| Gene3D | 1 | 118 | 118 | 1.8E-36 | – | |
| Pfam | 1 | 114 | 114 | 6.5E-22 | ||
| Gene3D | 119 | 343 | 225 | 1.2E-94 | ||
| Pfam | 123 | 335 | 213 | 5.4E-59 | ||
| SUPERFAMILY | 124 | 337 | 214 | 2.96E-70 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Sulfate assimilation | The pathways by which inorganic sulfate is processed and incorporated into sulfated compounds. | ||
| Molecular function | Sulfate adenylyltransferase (ATP) activity | Catalysis of the reaction: ATP + sulfate = diphosphate + adenylylsulfate. |
Expression pattern of LotjaGi2g1v0272400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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