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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0283200 |
| Transcript ID | LotjaGi2g1v0283200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT1G13230.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|Q5PP26|PII2_ARATH Piriformospora indica-insensitive protein 2; TrEMBL-Plants: tr|A0A151R9J1|A0A151R9J1_CAJCA Piriformospora indica-insensitive protein 2; Found in the gene: LotjaGi2g1v0283200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:75557251..75560169) extracted from Lotus japonicus Gifu genome v1.2.
CAGCATCTTTCACTTTCATCTCATGCAGGGCTCTCAGTTACTTAAAACAGCTCTGGCCATATTGGACTCATTACTAGTAT GATATTGAGCTTCGAGGACTGTGCTAACATCTTGTGTTCTCCCTGCTGTAATCCTTAGCTTTTCCATAAACACAAGGAAG AAGAGGGTCAGGTTTCTTGTTATGCTTCTGTGTTTTCTTTCTCTTCCATTCTCCTTTACATGTTTTAGTTCAAGCATAAT TTCTGGATCCTGTTCTTCTTTTCATGATACCAGAATCTGTTGTATTCCTTTTCACAAAATGCTGATAATTTTCTGCAGGG AGGACCCATGTTGGAATTTGTCTTGATATCAACTTCCTTGTAATTTAGTTCAATATGTACTAGTAGAGTTCACACCAAAC AACTCTTGTTTTGTGTTTATTTTTATCAACTTTGCTTCATCCATCTTGTGTGTGAGTGTTGTCTCTGATTGTCCTGTTTT TGACTCAATAACCTCATGAAGAGCTTCAAGGCTTTCAGTCATGCAATCATTGCTCTTTTCATAATCTGTCTAAGAGCAAG GAGCTATGGACAAACAGAACTTGATGTAGCTCCAATGGAGAAAAAAGAGAAGGATGCTCTATACTCCACCATTCAAGGCT TTGTTGGTGATTGGTGGAATGGCTCAGATCTCTATCCAGATCCTTGTGGTTGGACTCCTATTCAGGTACTCTTCACCAGT TCACCCATCACGACTAGACACCAAAGTGGAAAATTTAAATTTCCAAGCAACTAATTAAATTTATACTGTTCTATAGATAA GGTTGGACATATCATAATTCCCCCCCCCCCCCCCCCTTAAGGATTTAGGTGAGTCATTATTATGTCTTCACATATCAAGC TTTGGAATTTCTGGAAATGAATTCCCAGGTGAACTTTAGCTTTTGTACACTCTGCTGCAATCCAAAGGGAAAAGAAAATC ACTCAGCTTATTTTTGTCAAATTGTCAATTCTACACTTCATTCAAGAACTGTACTTATTTAAGGCTTCTTGATTCTCACT ACTTGTCAAAGTATGAAAATCAGTTGTTCCTCACAAGCATTGTGTGTTCGGTTCTATTTTTTGAAACCTCACAATCAATT ATGGTAGAGTAAAATCAATTCTGGATGAATTGGGAGGCACTTTGGAGAATTGATTTTGATTTCTGAAACAAAATCAATTT TGGTAAAAGCTAAAGAGAGTAGCTTCTGCGTTGAACATAATTAATTGTGAGATTTTACAGCTAAATTTCACAATATTACC TAGCAAAGTTCACATTTTAACTTCACTTTCAACTCACTTTTTCTTTGTACCAAAGTCAATTGTGGCTAACTATGATCCAC ACACGCACTACAAGTGTTAGGTTCTATATTCATTGCCCATTAAGCCATGTATAATCATAACACTACAATGCGACCAAAGT TATAAATTTTCCAGACCATTAGGGTCTTCAATTATTGCTAATTATAACTTTTTGTTGTTTTCTGCTGTAGGGGCTCTCTT GTGATTTGTTCAATGGGTTTTGGTATGTCACTGCCATGAAAGTTGGACCTATTGACGACAATTCTCTAAGATGTGCCAAA ATTGTACAATTTAGACCACAGTTGTTTGAGCTCAAACACCTAAAAGCTCTATCCTTCATCAAATGCTTTGAATCACAGCA CAGGAATCCAGTTACCATCCCCAATGGAAACTGGGAAAAACTTGCAGGCACCTTAGAATCACTTGAGTTCAGATCAAACA ATGGTCTAACTGGAAAAATCCCTTCAAGTTTTGGTGTCCTAAGGAACCTTCAGTCACTGTTATTACTAGAAAATGGCTTA ACAGGTGAAATTCCACCAGAAATTGGCAACCTCAGTAACTTGAAGAGGCTTGTTCTTGCTGGCAACTATTTCACTGGGAA GATTCCAGATATTTTTAGTGCACTAAATCAGTTATTAATCCTTGATTTGAGTAGAAATTCATTGTCTGGGACTTTGCCTC TGACACTTGGAAGCTTGACTTCCCTTTTGAAGCTTGATGTGAGCCATAACCATTTGGAGGGGAGTTTGTTGAAGGAATTT GCTTATCTTAAGAATCTAACCCTTATGGATCTAAGGAACAACACTTTCTCGGGTGGATTGACCTTGAGTTTTCAAGAGAT GCATTCTTTAGAAGAAATGGTTCTGTCCAACAATCCAATAGGTGGAAACATCAGGACCTTAAAGTGGAAAAATCTTCAGA ACTTGGTAATTTTGGATCTCTCTAACATGGGATTGACAGGGGAAATTCCTGAGTCTCTATCAGAATTGAAGAGGTTGAGA TTTTTGGGGCTCAGTGACAACAACCTCACAGGAAACCTTTCACCAAAACTATCATCTCTTCCTTGTCTCAGTGCACTCTA TGTTAGTGGAAACAATTTAACTGGAGAGCTTAAATTCTCTACAGAGTTTTATGGAAAAATGGGAAGGCGTTTTGGGGCTT GGAGCAACCCTAGCCTTTGCTACCAAGTTGGAGTAATGTCAACAAGCCATGTTCCTTATGGTGTAAAACCTTGCTAGCAT GAGATCAAATTGCTAGAATCTAGCACAAAAAATGGGGATGTGAACATGACATTCCATTCCATAGCATCTTTGGCATTTTT GAGCTATGTCCCCAATGGCTTCTGGTGGACTTTTCTGCAAGAAATGTTGGTGATGGGTTTGTTCTTAAATTCTTACACAG GTCTTTAATCAAGAAGAGTTCCACATATTGAAGTGTGGCAGTAACCTGTATTGTTCTTTTGTATTTTGTTCTAATATAAT TAAGCTGACAGTCTTTCGCGATGTTAGTTGGTTTCATGTAATTAACTATCTTAACATAGCCATTTCAGCTATTTTAATTT GTCTGTTCTATGTTTATATATATGATTAGTCAATTTCCA
CDS sequence (LotjaGi2g1v0283200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAGCTTCAAGGCTTTCAGTCATGCAATCATTGCTCTTTTCATAATCTGTCTAAGAGCAAGGAGCTATGGACAAAC AGAACTTGATGTAGCTCCAATGGAGAAAAAAGAGAAGGATGCTCTATACTCCACCATTCAAGGCTTTGTTGGTGATTGGT GGAATGGCTCAGATCTCTATCCAGATCCTTGTGGTTGGACTCCTATTCAGGGGCTCTCTTGTGATTTGTTCAATGGGTTT TGGTATGTCACTGCCATGAAAGTTGGACCTATTGACGACAATTCTCTAAGATGTGCCAAAATTGTACAATTTAGACCACA GTTGTTTGAGCTCAAACACCTAAAAGCTCTATCCTTCATCAAATGCTTTGAATCACAGCACAGGAATCCAGTTACCATCC CCAATGGAAACTGGGAAAAACTTGCAGGCACCTTAGAATCACTTGAGTTCAGATCAAACAATGGTCTAACTGGAAAAATC CCTTCAAGTTTTGGTGTCCTAAGGAACCTTCAGTCACTGTTATTACTAGAAAATGGCTTAACAGGTGAAATTCCACCAGA AATTGGCAACCTCAGTAACTTGAAGAGGCTTGTTCTTGCTGGCAACTATTTCACTGGGAAGATTCCAGATATTTTTAGTG CACTAAATCAGTTATTAATCCTTGATTTGAGTAGAAATTCATTGTCTGGGACTTTGCCTCTGACACTTGGAAGCTTGACT TCCCTTTTGAAGCTTGATGTGAGCCATAACCATTTGGAGGGGAGTTTGTTGAAGGAATTTGCTTATCTTAAGAATCTAAC CCTTATGGATCTAAGGAACAACACTTTCTCGGGTGGATTGACCTTGAGTTTTCAAGAGATGCATTCTTTAGAAGAAATGG TTCTGTCCAACAATCCAATAGGTGGAAACATCAGGACCTTAAAGTGGAAAAATCTTCAGAACTTGGTAATTTTGGATCTC TCTAACATGGGATTGACAGGGGAAATTCCTGAGTCTCTATCAGAATTGAAGAGGTTGAGATTTTTGGGGCTCAGTGACAA CAACCTCACAGGAAACCTTTCACCAAAACTATCATCTCTTCCTTGTCTCAGTGCACTCTATGTTAGTGGAAACAATTTAA CTGGAGAGCTTAAATTCTCTACAGAGTTTTATGGAAAAATGGGAAGGCGTTTTGGGGCTTGGAGCAACCCTAGCCTTTGC TACCAAGTTGGAGTAATGTCAACAAGCCATGTTCCTTATGGTGTAAAACCTTGCTAG
Protein sequence (LotjaGi2g1v0283200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKSFKAFSHAIIALFIICLRARSYGQTELDVAPMEKKEKDALYSTIQGFVGDWWNGSDLYPDPCGWTPIQGLSCDLFNGF WYVTAMKVGPIDDNSLRCAKIVQFRPQLFELKHLKALSFIKCFESQHRNPVTIPNGNWEKLAGTLESLEFRSNNGLTGKI PSSFGVLRNLQSLLLLENGLTGEIPPEIGNLSNLKRLVLAGNYFTGKIPDIFSALNQLLILDLSRNSLSGTLPLTLGSLT SLLKLDVSHNHLEGSLLKEFAYLKNLTLMDLRNNTFSGGLTLSFQEMHSLEEMVLSNNPIGGNIRTLKWKNLQNLVILDL SNMGLTGEIPESLSELKRLRFLGLSDNNLTGNLSPKLSSLPCLSALYVSGNNLTGELKFSTEFYGKMGRRFGAWSNPSLC YQVGVMSTSHVPYGVKPC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 6 | 19 | 14 | - | – | |
| PANTHER | 9 | 418 | 410 | 4.8E-146 | – | |
| PANTHER | 9 | 418 | 410 | 4.8E-146 | – | |
| Phobius | 20 | 23 | 4 | - | – | |
| Phobius | 24 | 418 | 395 | - | – | |
| Gene3D | 35 | 307 | 273 | 3.0E-45 | ||
| SUPERFAMILY | 44 | 377 | 334 | 5.78E-56 | – | |
| Pfam | 192 | 252 | 61 | 5.7E-9 | ||
| PRINTS | 218 | 231 | 14 | 2.6E-5 | – | |
| PRINTS | 239 | 252 | 14 | 2.6E-5 | – | |
| Gene3D | 308 | 403 | 96 | 1.7E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0283200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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