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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0287100 |
| Transcript ID | LotjaGi2g1v0287100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | LAG1 longevity assurance-like protein; TAIR: AT1G13580.2 LAG1 longevity assurance-like protein; Swiss-Prot: sp|Q8W4Y5|ASCL_SOLLC ASC1-like protein; TrEMBL-Plants: tr|I1MMA9|I1MMA9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0287100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76020350..76026505) extracted from Lotus japonicus Gifu genome v1.2.
GGGGTATGATCTGACATATGTCACTTATTTTAGATATGTTGGAAATATATGGTAAACCCCTATTTTTCAGTATATTTTGT TAATACAAATTATGTACCTTAAGTGTAAACTTATCCTTAGACTTATTAAGCTAGTTGAAAGTTTGATTGTTACTAGTCTG TTTGTGAGTCATAAACTAGAGCGAGCGAATCTTGACATTTCCTTAGGAAAAAAATCTTTCATCTCTTTAAAAATTCTTTT AAATACAAGGTAACTAAAATAAAATTGTTCCAAAAACTCTCTTATTCCTTTCTCGTGAACCAAACAAAAAAGGTGTCATT CACCTTCTCTCTCTTAACCAAATAGCAAATATGACAAGAATTAAAGTTTCTCTTGTGTCCATTAAACCAAACACACCCTA AACTCTAAAGATACACTTATGAAATAATATCTTCAAACTGATTTTTGTCTTTACAAATATATTGAAGTTTCAACCAAATA AATCCCTATTATTTGTGAGAGAGAAACATAAATAAAAAAGCTTTCAAGTCAAAGAGTCAAACTTTCCCTTCCTCCACATT CACAATTCACAATAGAATAGAAATATAGAATAGCTAGCATACATAATTATAATTGGTGACTTTTACTCATATTTCATTTT CTGAATCTGAAGCAAGCAATGAGTGGTGCTGTTGGTTCCTGGGTTGCTCACCATCTGGCCTCCATTGACTGGCACCATGA ATCCTACCCAGAGTTTCGTGATTTCTCCGTTCTACCCTTCCTCGCTCTTTTCTTCCCTTCCCTCCGCATCTTTCTCGACA CCTTCGTCTTCGAGGTACTCTTCTCTGTTCTCTCTGCTTGCTACCACCCCTTTCACTCTAAGCTTATCATCCATCATTTT TTTATTCAAAGGGTCTTTTTTTTGTTGTTATAGCAGTATTAAATTAAATTAAATATGATACTTATAGTTATAGACTCCTT ATTAAATATTTTTTATTTCTTTTTATAGACAGCCATTTTTTTTCCTTTTTTGGAAAAAAATTATTTTACCTTTAAATATC AGGGGAATTGATTGATGCAATTTATTCCAAGTGGGTAAAGGAAATTAACAAGAGATACTTGGTTGATTCTTCATATGGTA TTAGAGCTCATGATCAAGTGTGTGTTTGGATTAGTGTTAGCAGAACTAATTGACATATTTGATTCTACTAAAATTGCATA TGGTAAACGCGAGTTAAAATGATGTGATTTATGTTTGGATTAGTTTACGGGAAAAAAGTGGTTTTTATAGGGTGGTGTTA TGAAATTCAGTTGTAAAATCTCAGAATTGATTATGTTTAACCCAAGCGACTATTTGTTGTGGCAATTTTACTAGTTAGAA TTGATTTTGCTTTCCAAACATGTACCAAGTGTGTCTTAACCTGATAAATTAACATTTAGGATAGTTAGTTTTTGTCTTTT TGACACCTAACTAATGATAAAAAAACTAACGTTATAAATTTCTAGGTGTTGAAGGAGAAGTTAATGATGGAGTTTCTGGA AAATTGAGGTGTAGAGGCTGATTTTAACTTAGGCATGGAACTATTGTTTAGGTGTCTGATAGTCATTGTAAGATTATTTC AGCTTTTCTTTTTCCATAAGTTCTTGATGAGAAGTTTAGGCAAACTGGCTCCAAGAAAGATACATTTGCAAAAGGAACAT AGGAAATGTGATGTCGGTATTTTACTACTGCCTATCTCTAAATGAGTCTATAAGGGGTGGACTCACCTTATAAGCTGCTG AGGAGCTGTAGTATGCACAAATAATAATGGTTTTTCAGTGTAATTGTGGTGTGCAGTCACTACATGTTTTATAAATTATT GTTGTTTCCTTTACCCCTGTACCAGGAGAGGGGAAAACTTTTTTTTTTATCTTATTTCATTTTTTTAAAATCTTTTACGT CTTTTATGCCAAGCGTACACTTGATACTTTCTTTCTATACACCTATCGATTTCTTTCGGATATTTTGATTATACACAGTC AATCTGAAGTGAATGGCATTTACAGAAAGTCGCAAGACGATTGATTTTTGGAAGGGGACATGAGACGCTGGATTTTCAAA CCAAGGAGAGAAGAAAAAAGATTAGAAAATTTAAGGAATCAGCATGGAAATTCGTTTATTTTCTATCCGCTGAAATTTTT GCTTTGTCTGTAATATATGATGAGCCTTGGTTGACTGACACAAAATATTTTTGGGCGGGGCCAGGGAATCAAATATGGCC AGAGCAAAAGATTAAGTAAGATTTCTTATTTACATGCCTTATCGTTATAGTTTTAAAGCTGTTTTCTTGTTATCATTTGT CCTTCCTGTTACTTTGATGTTCAACTTAAGTTGGTCGATTGAGCAGTAACCTTTTAGTATTTCAGATTGAGATTGAAGGG GCTCTATATGTATTGTGCTGGATTTTATTCATACTCCATACTTGCTTTAATATTTTGGGAAACAAAGCGCTCTGACTTTG GGGTTTCCATGAGCCATCATGTTGTTTCTCTTGGTCTCATTGTGTTATCATACACTTTAAGGTATGGTTTCATTATCTTT TGTTATCTTGTCATCCTGGCATTTTGTGAAGTCTTGTGATTTCTATGCTACACTGTTCTCTATTGCTTAATTCGTTTGAT TTCAAACTCCTTATCAAAAAAGTAAATGTGTCAAAATTTTCATAATGGTGTGTGTTTGTTGTCAATGTGTGTGAGAGAGT GAGAGTACACAGATTTTCAGAAAAAATAAGTGTCTACTGACAGTATCTTCACTAATTGTATTTGATTTTAATTTACTTCA CTACTTCATTTTGAAAGTATCACACAATGTAGTGTTTTTGTTTCTTTGTTTAATACACTCAGGTTTGTTCGAGTTGGATC AGTTGTTTTAGCTCTTCATGATGCTTCTGATGTGTTTCTGGAGACAGGGAAAATGTCCAAATATAGTGGTGCTGAGACAG TGGCTAGCTTTGCATTTGTTCTTTTTGTTTTGTCTTGGACCATACTGCGCATCATTTATTTCCCATTCTGGGTTCTTCGA AGCACAAGGTTTGTATTTATTTAGTTATCAAATTACATTTTCGTTTACTTCTGTCAGCTGTTACAATTCCTCACTTCTTT ATTCAGTAGCCACTAATCTAGGTGAACTTTATGATGTTCATACACATTTTATGAGAGTAAAAAGTACCTAAACGTACTTT AAAAGGACAATGATTCGCTTGTCTGTTGCTCTTCAGATTTAAAACAAGTCATCCTTGGGGAGATTTACACTTTTTTCTCC TACATTGTTTACGGAAAGGAAGCTGTACTGGTTTAATTTTTATGCAACGCTACAAAATCAGTTTTTTATCTTGCCTTTCT TGTTTAGTTTTTTTTCCCTTCATAATTGTAATTTTATATGTACTCCGGTGCTATTTACCAACTAAGTGTTCGCAAAACAT ATTTAGTGATTGAGATCATGTGTCATCTTACCAAAAATCACAAGCCATTGCCTTGATTAATTTCTCTAGACTCCAAAGGC TTTATCAATTTTTGGTACCCTGTTCCCGGCCTTATCACATTTGAACAGTTTTTTGTTGTGCAACATCTGGGACTGGTGAA ATTTTCACTGGCCTGGCCATAGAGTTTTTCATTTGGACTATTTCAGAATCTGGCAAAATCTGATGGGGTAATGGCTACAC AAAGAAAAATTGTAGACAAAACTCCCCTACCTTCTGAATCATTAGGTTTACCTTTGGATCTGCTCTTTGCCACATCAAGC TTTTCTGCAGACATATATATGCTCATTATAATGCCTATGCAAACTGGTTGTGTTTCTCAGTCACACAAGCTGTTGTTGAA TGGAAATGGTGTCAGGAATTATTTGTAGAGTTAGTTGACCTGTTCAAGTGGTTCTCATTTCTCATGCTCTTTTTTTGTTA TGTAATGCAGGTTTTCTCTTGAGTAAAATTCTTAAGGTTCTGTAGATTGTCAATAATCCTTCTAATTCTGCAAAAGTGTG TTATCATATATTTCATCCTTTGCTGATTCGTAGCATGAAGCAGGGACATTTCTCCTTCTTAAGGTGTCAAGTGCGACACT CAGATGACACATGTCAGACACTCCTCATGAGATGTTCTATTAAAATCAACTTTTTTTGGCTTGGTGTGCCGACATGGCTT AACACTTAGTTGGCACTCAAACAAGGCATGCCACTTGAATGACAATTCTTATTGAAAAAATTCATATTTTTGAATTACTT TCAGAAAAGTCAGCTTAAATTATCAAGAAGGTTAAAATCTGAAATTGTTTACAGTGTGTCTGTGTCCATCACAATTCATT TGGTGATGTCACTTCTTTTTATGATCACCCTTGTACCCCACATATTGTATATATGTAGGGGGCATATGAAGTGAGAACAT GAGAAATGTCTTGACTGCAAAATCATGCATGGTTAACTACTCTCTCTCACGCCGATAGAGACAACAATCTGCCTCCTATT GTTAAAGTTTATCAAAGGACACTGCAGAGATTTCACGGATTCGATTTGAATTGCAATGCTACATTGTTCACATATCGTTA TCATTCTCTTCCTGTGTTCACTTATTTTATTTTCTTCTCGTTTTGGCAGCTATGAAATTGTTCTCTGCCTTGATACGGAA GAACACCAGGCGGATGGTCCAATTTATTATTACGTGTTCAATACTCTTCTATTCTTCTTGCTTGTTATTAATATTTATTG GTGGGTGCTGATGCTTCGAATGCTTGTCAATCAAATCCAAGCAAGAGGAAAAGTTAGTGAAGATATTCGGTCTGGTAAGC ATACATGACTCTCAAGTATGAACTTTTGATTGGACTGCAATATTTGATCCCTCTTAGAATGTGCATGGATTTAAACAAAC AATTTAGAGTAGATATATGGTTATAGAAGTTCTGTTTGAGTAAGTGTCAAGTCTCACTCATTCTGGAATCTAGATGGATA GTGAGAGGTTATGTTGATGAAATAAAAGGGAGAGAATCTGTGAACGAAGTGGAATCCTTTCTATAGCTGATCGACTCCAA AGAATGCAGGGGAGTTGGATAGATTGAGTTGGTGATAGACAAATTAACATTGTTGCGTTAATCATAACATCAGAAGTTAG TTTCAAAAAAAAATCATAACATCAGAAGACATCTCATTCATACTGTATAGCCATATTTTTTGTGATCTAGTAGAAATTTC AACTGGTTATCTGATTGTAAACGCGTTTTCCCGTTTTCTTTATGCAGATTCGGAAGATGAACATGAACATGAAGAATAAG CAGGAAAACAAGATTGAATATAGTCACATTTTGTTTAAAATGGTATCATATTTTACACGCACCCTGTACTTCTCGGTTCT TGTCACATTTTATGCCACGCCATGATGACAATGTAAAATTCACCAATAGCATAGTGTAAACACACGAAGTAGCTCATCAA ATTATTTCTGCTATTGTTTTACAGATAAAGCTCCAAATGAAACTCTTAGTTTGGGACGGAATAAAAAAAATGGGTAAAAA GAGTGAAATTTTTGCGTATTAAACAAATCAATAATGTTTAATTGGAAGTAGTATAGAATTTTAAAGAATGGGCAAATACA ACATTTGAGTAGTATTTTATTAAGTAAGAAATGTGATGAGTGAATGATTGAAATTTGAAAGAGAAGAGGGATATAAATAG AAAATGAAAGTGGAAATGAAGGGGAGAGTGAACGAATCATAGCTCTTTGCTCAATTTTGCCTTTGTTATTAAAACCATGA TCCAAATCAGGATGGACTGGAGTTGAGTTTGGTCTACTTCTTGGTTTTTGTCTGGGCACAACAATGTTGAACTAATATTG ATGGCGATTTTTTTTCATTGAAATGCATGACTAAATATAAAAGAAAAATTGCTAAAATATTCTCACCACCACTCAGGGTT GTTCCAACACTAAATGAGGCCTAAAACAAACTTTTTTCTTGAACGTCTAAAATAAATTTTAAAGTGAGACTTTTTACTTG AATTATTTTTTTTTTACGTAAACGTGGGATATGGAGTATTTTTTTTTTCTTTTCATGAAGACTATTGGGTTTGGTTTTTT GAACTGAGGCTTCGGTTTTTATTTGAGTCCTTCTTTACAAAAAAGACTATTGGACAATGGACTTATTACATAAATG
CDS sequence (LotjaGi2g1v0287100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGGTGCTGTTGGTTCCTGGGTTGCTCACCATCTGGCCTCCATTGACTGGCACCATGAATCCTACCCAGAGTTTCG TGATTTCTCCGTTCTACCCTTCCTCGCTCTTTTCTTCCCTTCCCTCCGCATCTTTCTCGACACCTTCGTCTTCGAGAAAG TCGCAAGACGATTGATTTTTGGAAGGGGACATGAGACGCTGGATTTTCAAACCAAGGAGAGAAGAAAAAAGATTAGAAAA TTTAAGGAATCAGCATGGAAATTCGTTTATTTTCTATCCGCTGAAATTTTTGCTTTGTCTGTAATATATGATGAGCCTTG GTTGACTGACACAAAATATTTTTGGGCGGGGCCAGGGAATCAAATATGGCCAGAGCAAAAGATTAAATTGAGATTGAAGG GGCTCTATATGTATTGTGCTGGATTTTATTCATACTCCATACTTGCTTTAATATTTTGGGAAACAAAGCGCTCTGACTTT GGGGTTTCCATGAGCCATCATGTTGTTTCTCTTGGTCTCATTGTGTTATCATACACTTTAAGGTTTGTTCGAGTTGGATC AGTTGTTTTAGCTCTTCATGATGCTTCTGATGTGTTTCTGGAGACAGGGAAAATGTCCAAATATAGTGGTGCTGAGACAG TGGCTAGCTTTGCATTTGTTCTTTTTGTTTTGTCTTGGACCATACTGCGCATCATTTATTTCCCATTCTGGGTTCTTCGA AGCACAAGCTATGAAATTGTTCTCTGCCTTGATACGGAAGAACACCAGGCGGATGGTCCAATTTATTATTACGTGTTCAA TACTCTTCTATTCTTCTTGCTTGTTATTAATATTTATTGGTGGGTGCTGATGCTTCGAATGCTTGTCAATCAAATCCAAG CAAGAGGAAAAGTTAGTGAAGATATTCGGTCTGATTCGGAAGATGAACATGAACATGAAGAATAA
Protein sequence (LotjaGi2g1v0287100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGAVGSWVAHHLASIDWHHESYPEFRDFSVLPFLALFFPSLRIFLDTFVFEKVARRLIFGRGHETLDFQTKERRKKIRK FKESAWKFVYFLSAEIFALSVIYDEPWLTDTKYFWAGPGNQIWPEQKIKLRLKGLYMYCAGFYSYSILALIFWETKRSDF GVSMSHHVVSLGLIVLSYTLRFVRVGSVVLALHDASDVFLETGKMSKYSGAETVASFAFVLFVLSWTILRIIYFPFWVLR STSYEIVLCLDTEEHQADGPIYYYVFNTLLFFLLVINIYWWVLMLRMLVNQIQARGKVSEDIRSDSEDEHEHEE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 30 | 30 | - | – | |
| PANTHER | 12 | 313 | 302 | 2.3E-161 | ||
| PANTHER | 12 | 313 | 302 | 2.3E-161 | – | |
| TMHMM | 29 | 51 | 23 | - | – | |
| Phobius | 31 | 51 | 21 | - | – | |
| Phobius | 52 | 83 | 32 | - | – | |
| SMART | 79 | 293 | 215 | 6.5E-73 | ||
| ProSiteProfiles | 79 | 293 | 215 | 27.926 | ||
| Pfam | 80 | 286 | 207 | 1.2E-39 | ||
| TMHMM | 84 | 103 | 20 | - | – | |
| Phobius | 84 | 103 | 20 | - | – | |
| Phobius | 104 | 134 | 31 | - | – | |
| TMHMM | 134 | 153 | 20 | - | – | |
| Phobius | 135 | 153 | 19 | - | – | |
| Phobius | 154 | 213 | 60 | - | – | |
| Phobius | 214 | 238 | 25 | - | – | |
| TMHMM | 214 | 236 | 23 | - | – | |
| Phobius | 239 | 260 | 22 | - | – | |
| TMHMM | 261 | 283 | 23 | - | – | |
| Phobius | 261 | 282 | 22 | - | – | |
| Phobius | 283 | 314 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi2g1v0287100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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