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LotjaGi2g1v0293100.1

Overview

Field Value
Gene ID LotjaGi2g1v0293100
Transcript ID LotjaGi2g1v0293100.1
Lotus japonicus genome version Gifu v1.2
Description Glucosamine-6-phosphate deaminase; TAIR: AT1G13700.1 6-phosphogluconolactonase 1; Swiss-Prot: sp|A2YNH4|6PGL2_ORYSI Probable 6-phosphogluconolactonase 2; TrEMBL-Plants: tr|I3SB96|I3SB96_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0293100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:76735736..76741958) extracted from Lotus japonicus Gifu genome v1.2.

AAATAAAACTTGGTGTTCATATCATTATACCATACCATACCATACCCATCTTCAACATTCATCAGCTTCTTCTTCTTCTT CTCTGTGCCACCTCTCTTCTTCTTCCCTGTAAGCATTTCTCTCTTCCTTTCCCTTCTTCTCAAACGCACCGATTCTCTAT ACAACGCTGTTTCCACTCACCTTAACCTGCATGAAACTACCATTCACCTTCAATTCATAATTTTCTTATTTTTCAAGCTT TTGCTGCATTGAGGGTTTCAATTCGACATTTTTATGATCTGGGGTTTCTTTATTTCCTTCTGTAAATTTTTTCTGCGATC ATGCTTTGTTCCTGCATTTTTTTTGGCATCGATCCCTGGAAATTTGGGTTGTGGCGATGATAATACCTTTTGTTGAATTT CATTTTTTCTTGATAATTAGACACTACACATGCAAATTGAATTTAGGGGTTGAAGTATATCAAGTAGTACCTTAAAGATT TATTTTTTATACTATAGTGTCATGTGGGCAATTGAGTCATGAAGTCAAATGAATAGTAAAATTATCTATGCATGTACTAA TTGTCTTGATCGCCTATGAAGCAGGATCTTGGACAATTTTGGAATCCCATTTGTGTTTTTGGTTTAAGAGGGCTTATATT ATATCAAAGCTGTTTGTGTTGTGAATTTTGTGCTACTGCTAAGCTGTTTGTATTTCAATTTTCAATGTCTTGTTATTTCT ATGTGACATTGTTTTGATGCTATGTTTTTGTGCTTTTGGGTTTGTTGGTGTGAATTAGAGCTATCGGACTCGTCCAAACC ATGGCTCTTTCGGATGGTGATAATAAGATTAGACGTGAGTTGAGGATTCATGAACGTTTGGATGACCTGAGGGCTGATTT GGCAGACTATATTGCTGAAATATCGGACGCGTCCGTGCAGGCGCGGGGAGTCTTTTCCATTGCTATATCTGGTGGTTCTC TCATTGGCTTATTGGGGTATCTGTATCTTATCTTTTTCATATATGTTTCTATGCTTTTAGAATTTGGTGTTGGATTAAGA ATTTGTTGTTGCAAACAGAAAACTCTTGGAAGCTCCTTATAATAAGATAATGGACTGGTCCAAGTGGTATGTCTTCTGGG CTGATGAACGTGTTGTCGCGAAAGACCATGCTGATAGCAATTATAAGCTTGCTAGAGATGGACTTTTGTCTAAGGTTGTC CCTGCAATTCAAACATCTCATTGATTTATTCATTTATATAAGGAATAGTTTCGAGCATTAAACTGTTCTTTTTGAATTTA CTTTCTTTCCTGATCCCTTCTCAAAAGGGAAAACCAAACAAAATGGGATTCACTTCTTCTGTTTTTGGCAGTTGACTGAG AAATTTGAATAACTTGTTTCAATTTTGAGCATTTACTAAATAACCTTTACAAAATTCTCATGGTCGGTCACATGGAACAT TAGTTTATTGCTTCAAAGTTCAATGTGCTTTATTTTGAATGTCTGTTTACTTATACAATCATCATGAGCACTTCCAAGGA GGTGCTTAGCATTGGGTTTCATTTTACTATATTGAGATTCAACATTTACTCTGGTGTGGAAGTTGAACTGTTGCAAGTTG ATATTTAGTTAATCCTTCATGGAATTAGTGACATATGTAGCAGTTTGCTACTAATTTCTTCTTCATCCTCCTCTGTTTCC TTTTTATTTTCCTTTTCCATGGAACAGGGGAGAAGGCGAGAAGGACTTAGGGTTCCATTATAAATATAAACCCACATAAG TTTGAAATATCAAAAGGCTTCTGGCCAAAACTTGTTTTTGTAGAGGAAATAATTGTGCTGAAACATGGAATGGTATTTAG TTTCCTTCTGAAAAAATTCCGACAAGCCTCTGTGCGAGGAAGATTTCCATATATGTTGAGAATACATAAATCTCGGGATC TCATCTTGATAATTTGATTTGGGTAGTTAGTATTCCTTTTTAATCCCTTGGCATTCTCGGATATCCTTTTATTCATTTTT GAATTATCAATTACTTACCTGGTCTGAACTTCTCTTTAAATTTTGATTGCTCTGAATTGAATGGAAGGAGATCAAGATTT TAAACACACCAATACCTCTTGGGGTCTCTTCTGGACAACCGTGATTGAAGCATGATAGATACGTCTAGTTGTCCTATAGG TGTGGGTTGTCTATAAAACTGGGGGTCTTATATGAAAGCTGTAAAATCTATCTTGGTGGCTGTGCTTGCAGAAAAGCAGG TTGATTTGAAATGATAAGGGTAGAAACAATGAATCCCAAACATCGAATCCTTGTCTAAAGGAATCTTTGTTTGTGAGGGC AACTGGGGAGCTCTAGCAAGACCGGATCGATTTTTTTGCGGCTATATTGCCACATGAAGCAAATACTAGGTCTGACCTGC TGAAAACCATGGACCAGAGTATTGGAAGTGATCACCATGCATTTGATAATAGTTACTGGTTTCACCTTAGAAACTACAGT ATCCATCTTTCTTTGACTGAGATTAGCATTATATCCAGAAATTGGTATTCCCGGTTAGAGTTAATTAGTAGTTCTATGAT GGACACTGCTGTATTCACTTTATGAAAACGATTAATTATCATGTATCTCTTCATAAATACTCTAGCTATCCGCTATCATT TGCTGGTTTATTTTCTCCCTTCTTTTCGATGACTTATTTGGTTCCATGAATTTCTATCTTGGCTCCAAGTTCTTCCCTTG GTGCTTTTGTTTATCACCTTCAGGTTTGTATATTAGACCAATAATACTGTACCCAGGGTATATTGGGCAGACAAAGGATC ATACTGGGTTATTTTAACAACAAACAGGGGGATAGTTGCAATCAGGATCTAACTTTTGTATTTACGCAAAGTTGTCAAAT TCAAGAGTCTACGTAATCTCATGAAGTGCCCGTAGACTTGTAAATTTGTAACATTTTGCCTAATATAAAAAATACATTTA AAATCCTAATGGAAGAACTAGAAAATCTTTCTTAAGCAATATAATTCTGTACATAATGTGCTTACCAGCTGGGTATAAAA CTATGCAATATTATGTACAATGCATTTAACAAGCTTACCTTTAAAATAAGACTCCAAGTCCCCTACAATTTTGAACATAC AAATATGAAGACAAAATTTACAAAACAAAATCTCTGCACAAATAATTGAACCCTAGGTATAAAACAATTTGCTTGACTGA ACACAATTTATAAGTGAAATAATAGTTTGTGGATGAATTGATAATATAACAAATTTGCAGAAAACAATCTGAATGTGTGG TTTGGTTTCAAGAGCAATGACCTAGATTGTCGGGTCACTATTTGTGTAAATGAATTTCCTAGGTATGCAGAAAAGATTCA TGTTGAATTTTTGGGCTACAAATGTGTAGCTTAGATTGTGCTACAAACATGTTCCGTCACGAGCAAGAGCTAAGACAATT AGGACCCTAGGGTTTGAAATGTGTTTTTTTATTGTCTTTTCAGTTGATGCAGATCAGTGTGTTGAAGGGTACAATCAAAA CATGTCTTTGTTGGGTAAATTTGGGGTAGACTTTGATCCAAAATATAGGCTTGTTGACTTGCTATCGACTTGGCAATTTT ATGCTACATTGAGACGTCTACTGAATTTTGCATTGTAGCAACATAAGATGCATTACAATATGCCAGTAGTGAACAACTTG CTGTTGATGCATTCACCTCAAAAGTTGTAGATTGTTAAAAGAAATGTTTTAACTGGGGTGTTGTAAAACTTTGTTTATCT AGGGTGGTTCTTTAAGCTTTATGTTACATATGGTATGTTGTGGTTGGGTAATTAGGATAGCCCTGTATATTTGGATTTGT AACATTTGATAATCACTTAATCAGGCTTCAGGTTTTATGTCTTTACTATCATCTTCTGTGCAGTTGTGTTCTTGGGTGGT TCTGTTCTGAGATTTGTAATTTCAAGATATCGTTCAACTTGTATGTAAATTTGTGACTGGTTCCCCGGTTGTTGAAGGTG CACTTTTTATGTATGGCACCATTTGGAAACCTCTGAATTGCATTTTTTGCTCTTCTATAAAATACTAAAGCTGCTTGTGG ATAATTTTCTTCCCAATGATAGAAAGAGATGATTCAAAATTTGCTTGCTTTCTATTTAAATGTTGAGTCCAACAAATGCG ACACGGGAGCTTCTAGTATAAATGTTATTCTTTGATATGTAAAAGTTACCTTTTCTGTGTCTCTCCATGTGTCTTTTAAT ATTCCATGAGATTTTTTCTGGTTCAGTTATTTCATTACTTAGTATTCACTTATATTCCTCTCCTAATATGTTCGTGACAT TAGCAGGTGCCTGTCATCTCCAGTCACGTGAATTCTATTAATGATTCCGTATCAGCAGAAGAAGCTGCAGATGATTATGA GTTTGTCATCCGACAATTAGTGAAAACCCGTGTTGTCAGCGTGTCTGAGGTCAGTGACTGCCCAAAGTTTGATCTCATTC TGCTTGGATTGGGTCCAGATGGCCATGTTGCCTCTTTATTTCCCAATCACTCAGCACTCAATGAAAGGGAAGTATGGGTA ACTTTCGTTACTGACTCTCCCAAACCCCCACCTGAGAGAATCACATTTACCTTGCCTGTTATCAATTCTGCATCCAATGT AGCCGTGGTCGTCACAGGCGACAGCAAAGCAGAAGCTGTACACTTGGCAATAGATGATGTTGGACCTGACTACCCAGTAA TACCAGCAAAAATGGTCCAACCAGCTACTGGGAAGTTGGTGTGGTTTTTGGATAACCTGGCTGCCTCAAAACTTGATGAT TCCAGTTTAATCAAATAATATGAAGTCCCTTGCTGAGGTGTTTGTATGTAGTGCTGTTAAGGGATTTGACAAGTGTTGAT CCTGATCCTGGTATTTCTTTTCTCTTGGATAGGAAGTCTTTGTTTTGCCCCTTTTTTCCCTCTCTTGGGAGGTTGTTTGG GAGAAGTATGGTATAGTTTTTGCAAGCAGGCAATAAAAGATGAGAGCATCATAAAAACTTCTTTCTTTCCTTTCCAATTC CTCATTGGGTTATTGGTTATGGTGGTACTGATGGTCTCTCCTGTTTGCAATTTAGAAAGGGAAATTCAGGTTCATGTAAT TCCAAGAGTTCACTTTTATTCACCCTCCCAATCTCTTGTTTAGCTATTTTTGTTTAAATTTCCAGTGTAGTCTGTACCTG ATGTAAAATTTTAAATATTGGGTTGGGAGGTGTTGATTGATTAAATTTGAGGAATCTTTTGCCCCTTGGGAGAAGATGTC ATGTGGCATCAAGTTTTCCCCCCTTTAAGCATTTGAAGCTATTGATAGATGCAACATGCCCCATCAAGAATGAGAAAAGA CACTTGAAAAGATTTTACCATCTACAAGTTTCATATTATTTAGTAACATATAGCCTTTTGGGGCATATAGGTTGACATGC ATTCATATTTACATTTAGTTTGGATGGATGGAATATAGAAAAGATCACATTACTAAGGAATGTAATAAAATTCAGATGCA TATCATCGTTCTATCATTTGGGTAGCATAAGGAAAAGAAAGTGTTAGTGCAACTATGAGTTGGAAAACAATAGAATAAAT AAAAGAATGAGTAGAATTTTCATGTTTATTTAAAATTTATATTTTTCCACTGAGGGATAAACTTAGAAATGAATGAAATT CCATGGAAGAAAGTGCTAGTTCCTGTTACATGCTATCTGCTACTGGAAGGAAAAAAAATATGTATGGATAATGGTCAAGT ACACGAGAAAAGTCAGTGCAATATACAACGTCACTCAATATATAATAAAGAATTGGGTCCAGACAAGATTTTATTTCTTT GATATTCTTTTCTATCCATATCATTATATAATGCATTCAAACATGAGATCGAATTGGTCTTGTTACTAATCATTAAGCAT TTCATCTTTTAAAAGGAGCCGATAAGGAAACAAAAATCTAAGTTCACTGGGGAAGGTCGTCAAGACTAAAGAAAGGTTTA ATAAAGAATTCAAAAGATGAAAACCAATTGTGTGCCAAATAAGGATATATTCCTACACTGTTTTGAAACTATCTGCATCA CAAGACAGAATCCTAGCAGCATCTACGAAGGGTGCGGGATTGGCAAATATCTTAACACTATGGGACAGAGTTAAAAGAAT GCTTGCCTTTTCATTTAGTCTCAAATAATTTTAGTATTTAGTCAAACAGGTTCAAAAACTGAG
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0293100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTCTTTCGGATGGTGATAATAAGATTAGACGTGAGTTGAGGATTCATGAACGTTTGGATGACCTGAGGGCTGATTT GGCAGACTATATTGCTGAAATATCGGACGCGTCCGTGCAGGCGCGGGGAGTCTTTTCCATTGCTATATCTGGTGGTTCTC TCATTGGCTTATTGGGAAAACTCTTGGAAGCTCCTTATAATAAGATAATGGACTGGTCCAAGTGGTATGTCTTCTGGGCT GATGAACGTGTTGTCGCGAAAGACCATGCTGATAGCAATTATAAGCTTGCTAGAGATGGACTTTTGTCTAAGGTGCCTGT CATCTCCAGTCACGTGAATTCTATTAATGATTCCGTATCAGCAGAAGAAGCTGCAGATGATTATGAGTTTGTCATCCGAC AATTAGTGAAAACCCGTGTTGTCAGCGTGTCTGAGGTCAGTGACTGCCCAAAGTTTGATCTCATTCTGCTTGGATTGGGT CCAGATGGCCATGTTGCCTCTTTATTTCCCAATCACTCAGCACTCAATGAAAGGGAAGTATGGGTAACTTTCGTTACTGA CTCTCCCAAACCCCCACCTGAGAGAATCACATTTACCTTGCCTGTTATCAATTCTGCATCCAATGTAGCCGTGGTCGTCA CAGGCGACAGCAAAGCAGAAGCTGTACACTTGGCAATAGATGATGTTGGACCTGACTACCCAGTAATACCAGCAAAAATG GTCCAACCAGCTACTGGGAAGTTGGTGTGGTTTTTGGATAACCTGGCTGCCTCAAAACTTGATGATTCCAGTTTAATCAA ATAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0293100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MALSDGDNKIRRELRIHERLDDLRADLADYIAEISDASVQARGVFSIAISGGSLIGLLGKLLEAPYNKIMDWSKWYVFWA DERVVAKDHADSNYKLARDGLLSKVPVISSHVNSINDSVSAEEAADDYEFVIRQLVKTRVVSVSEVSDCPKFDLILLGLG PDGHVASLFPNHSALNEREVWVTFVTDSPKPPPERITFTLPVINSASNVAVVVTGDSKAEAVHLAIDDVGPDYPVIPAKM VQPATGKLVWFLDNLAASKLDDSSLIK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11054:SF17
6 264 259 4.8E-141 –
PANTHER
PTHR11054
6 264 259 4.8E-141
IPR039104
Gene3D
G3DSA:3.40.50.1360
9 263 255 2.4E-81 –
SUPERFAMILY
SSF100950
14 261 248 2.33E-66
IPR037171
TIGRFAM
TIGR01198
17 260 244 1.8E-64
IPR005900
Coils
Coil
20 40 21 - –
CDD
cd01400
21 252 232 1.50073E-96
IPR005900
Pfam
PF01182
21 250 230 6.1E-71
IPR006148

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of
GO:0006098
Biological process Pentose-phosphate shunt The glucose-6-phosphate catabolic process in which, coupled to NADPH synthesis, glucose-6-P is oxidized with the formation of carbon dioxide (CO2) and ribulose 5-phosphate; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses.
Subterm of
GO:0017057
Molecular function 6-phosphogluconolactonase activity Catalysis of the reaction: 6-O-phosphono-D-glucono-1,5-lactone + H(2)O = 6-phospho-D-gluconate + H(+).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0293100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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