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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR006148
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We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.835s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0226179.1
n.a. PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic-like [Glycine max] gi|356551540|ref|XP_003544132.1| chr0 116809748 116811273 +
2 domain predictions
1 GO term
Lj1g3v0948710.1
n.a. PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic-like [Cicer arietinum] gi|502124145|ref|XP_004498405.1| chr1 11982147 11984164 +
2 domain predictions
1 GO term
Lj1g3v1034270.1
n.a. 6-phosphogluconolactonase [Medicago truncatula] gi|357464071|ref|XP_003602317.1| chr1 12976711 12980532 -
2 domain predictions
1 GO term
Lj1g3v1034270.2
n.a. 6-phosphogluconolactonase [Medicago truncatula] gi|357464071|ref|XP_003602317.1| chr1 12976711 12980532 -
2 domain predictions
1 GO term
Lj1g3v1034290.1
n.a. 6-phosphogluconolactonase [Medicago truncatula] gi|357464071|ref|XP_003602317.1| chr1 12987343 12990472 -
2 domain predictions
1 GO term
Lj2g3v1242260.1
n.a. PREDICTED: probable 6-phosphogluconolactonase 2-like [Glycine max] gi|356499907|ref|XP_003518777.1| chr2 19702144 19707191 -
2 domain predictions
1 GO term
Lj2g3v1242260.2
n.a. PREDICTED: probable 6-phosphogluconolactonase 2-like [Glycine max] gi|356499907|ref|XP_003518777.1| chr2 19702144 19707213 -
2 domain predictions
1 GO term
LotjaGi1g1v0172500.1
n.a. Glucosamine-6-phosphate deaminase; TAIR: AT5G24400.1 NagB/RpiA/CoA transferase-like superfamily protein; Swiss-Prot: sp|A2Z3C4|6PGL4_ORYSI Probable 6-phosphogluconolactonase 4, chloroplastic; TrEMBL-Plants: tr|I1MAJ4|I1MAJ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0172500 LjG1.1_chr1 32832909 32834599 +
2 domain predictions
1 GO term
LotjaGi1g1v0172600.1
n.a. Glucosamine-6-phosphate deaminase; TAIR: AT5G24400.1 NagB/RpiA/CoA transferase-like superfamily protein; Swiss-Prot: sp|A2Z3C4|6PGL4_ORYSI Probable 6-phosphogluconolactonase 4, chloroplastic; TrEMBL-Plants: tr|A0A072VQL3|A0A072VQL3_MEDTR Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase; Found in the gene: LotjaGi1g1v0172600 LjG1.1_chr1 32843356 32845774 +
2 domain predictions
1 GO term
LotjaGi1g1v0293300.5
n.a. Glucosamine-6-phosphate deaminase; TAIR: AT5G24400.1 NagB/RpiA/CoA transferase-like superfamily protein; Swiss-Prot: sp|A2Z3C4|6PGL4_ORYSI Probable 6-phosphogluconolactonase 4, chloroplastic; TrEMBL-Plants: tr|G7J870|G7J870_MEDTR Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase; Found in the gene: LotjaGi1g1v0293300 LjG1.1_chr1 71162959 71172456 -
2 domain predictions
1 GO term
LotjaGi1g1v0293300.6
n.a. Glucosamine-6-phosphate deaminase; TAIR: AT5G24400.1 NagB/RpiA/CoA transferase-like superfamily protein; Swiss-Prot: sp|A2Z3C4|6PGL4_ORYSI Probable 6-phosphogluconolactonase 4, chloroplastic; TrEMBL-Plants: tr|G7J870|G7J870_MEDTR Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase; Found in the gene: LotjaGi1g1v0293300 LjG1.1_chr1 71162959 71172456 -
2 domain predictions
1 GO term
LotjaGi1g1v0293300.7
n.a. Glucosamine-6-phosphate deaminase; TAIR: AT5G24400.1 NagB/RpiA/CoA transferase-like superfamily protein; Swiss-Prot: sp|A2Z3C4|6PGL4_ORYSI Probable 6-phosphogluconolactonase 4, chloroplastic; TrEMBL-Plants: tr|G7J870|G7J870_MEDTR Glucosamine-6-phosphate isomerase/6-phosphogluconolactonase; Found in the gene: LotjaGi1g1v0293300 LjG1.1_chr1 71166757 71172401 -
2 domain predictions
1 GO term
LotjaGi1g1v0293400_LC.1
n.a. Glucosamine-6-phosphate deaminase; TAIR: AT5G24400.1 NagB/RpiA/CoA transferase-like superfamily protein; Swiss-Prot: sp|A2Z3C4|6PGL4_ORYSI Probable 6-phosphogluconolactonase 4, chloroplastic; TrEMBL-Plants: tr|A0A151RS78|A0A151RS78_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0293400_LC LjG1.1_chr1 71176874 71179567 -
2 domain predictions
1 GO term
LotjaGi1g1v0293500_LC.1
n.a. 6-phosphogluconolactonase; TAIR: AT5G24400.1 NagB/RpiA/CoA transferase-like superfamily protein; Swiss-Prot: sp|A2Z3C4|6PGL4_ORYSI Probable 6-phosphogluconolactonase 4, chloroplastic; TrEMBL-Plants: tr|I3S2J6|I3S2J6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0293500_LC LjG1.1_chr1 71179675 71180027 -
2 domain predictions
1 GO term
LotjaGi2g1v0293100.1
n.a. Glucosamine-6-phosphate deaminase; TAIR: AT1G13700.1 6-phosphogluconolactonase 1; Swiss-Prot: sp|A2YNH4|6PGL2_ORYSI Probable 6-phosphogluconolactonase 2; TrEMBL-Plants: tr|I3SB96|I3SB96_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0293100 LjG1.1_chr2 76735736 76741958 -
2 domain predictions
1 GO term