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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0295200 |
| Transcript ID | LotjaGi2g1v0295200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha/beta hydrolase, putative; TAIR: AT1G13820.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q8X5K0|MHPC_ECO57 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase; TrEMBL-Plants: tr|G7JWW5|G7JWW5_MEDTR Alpha/beta fold hydrolase; Found in the gene: LotjaGi2g1v0295200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77012087..77015637) extracted from Lotus japonicus Gifu genome v1.2.
ATTTCATATGATGTGATCAATCAGGTTAGTTTCGCCGAAAATCCCATCATGAGTAGTTGTGTGAAGCCATTGGTGCAGAG CAAGGAACCTCCAATTGTCCTTCTACATGGTTTTGACAGGTGCTCAAAATATGCAAGAGACAAAGTTAGTTAATACATTT TTCACTCAAGTTGCCCCTGAATTTCACCCTGCCTTATTATTCAGTTCATGTTTAGAATGGAGATACGGACATCCTCTGCT TGAAGAATCTGGATTTGAGACCTGGGCCATTGACATTCTTGGTTGGGGCTTCTGTGATTTAGGTTTGCTTTATTACTTTG TCTATTGTATTTGTATCTTATTCCTTCCCCTTTCTTTATGAGATTTTATTCATGCTTTCATCTCTTTTCTTATATCCATC AGAAAAACTTCCATCTTGTGATGTGGTATCAAAGCGTGATCACTTCTATCAGGTACTTATTTATTTTCCAATCTATCTCA TGTATCTCCAACTTTTGATCAAACCTAACAGCTTAGTTATAGTCTGGCCAATAAATATACTTCACTTAGTAAAATGTATG CTTTATTTATTGAACTTTGTGAATTGGGGTAACATATCAGTTAAATCATCGGCTTTGACCTGTTCATGAACTATCTTTGA AGAAACGACTGTCTTCGTCTATTGTCAATTAATTTGTGTCACTTCAACTTCTCTTATGTTTTCCTTCCAACTTTTGCACA TGCTGTGTTGACGGTGAGATGTTTTTATGTGTAACAGTTTTGGAAGTCCTATATCAGAAGGCCAATGATATTGGTTGGAC CAAGCCTTGGCTCTGCTGTTGCGATTGACTTTTCAGTCAATTATCCAGAAGCTGTATGTGCCATCCAATAATTTAACTTC TGAGTATCCACAATGACATGGCTTGCTGATAAGTTCTTCATAAAAAAAAGTTCTCCATCAAATGATTTTGGTGTGCTCCG GTCATTTATTTACAGTTAATCTTTTCAGGTGGAAAAGCTTGTTCTGATGGATGCTAGTGTATATGCAAAGGGAACTGGGA GCCTAGCAACCTTACCAAGATCGGTTGCCTATGCCGGGGTAAATACCTCTGCAACTTACTAAAACCTTAAGTACATCATA TCATTGTATGTTATCTAGAAAATCAAACCATATCCCATATTTGTCCAATTTTCTCTTGCAGGGTAAATTCAATAATCTAG AAAATTATTTCAAAATACCCATCACTCCCCTAAAATGTAGTCAGTGTAATTTTTCTTCACTTTAATTTTGGGTCTTTATG CTACCTTTAAGTAAGTACAATTATTCTTAATATGATACTGAGCTTTTGGAAATGGCATCTCTTTTATGTGTCTACATCTG TTGGTGTTGTTATTCCTTCCATCTTACAAGCCAGTAATTATACATCATCGCTTGAATTTTCTACTACTGTTATGGGAGAT ATATGAAGGACTTAAATTATGCAAGTTACAACTCACTACCGGCACTATTTTGAACCAGGTATCTTTATTGAAGAGCATTC CATTACGCTTTTATGCCAACTATCTGACTTTCACCAACACGTCCTTCCGCACCAGCCTTGATTCGGTTAATGTGAGTTGC TTGGTCCTGAAGTCACTGTTTTAGTCATATAATATGCGAAATATTTTTCCCACACATTTTTTACTTCATAATGGGCCATT GGGCACATGTTCTCTTGGGTAACTTAGTATCACATGATCAAGCACCTTAGGGTAGCTGAGAATCCCAACAACCCAATATT TCGTTTATGTTATGTGATTACTGCTACTGCATGAACCCAAGAAAAATGTTTGTAAAAGTACCCTTCCACAGGAATACATG TCCTGCATCTGAAATAGTAATTTATGTATTGGATGTATCCATTTACTGAAATCCCCTCATACAATGGGCCTTGTATACTA TGTCATTTTGAATGTTGCAAGAATGAAGAGTGCTTACACAGTCTTCATTTCAATGTTATAGGTGGGTCGCTTGCATTGTT TATTACCTTGGTGGGATGATGCTACTGTGGATTTTATGACTAGTGGTGGTTACAATGTTGGTTCCCTGATAAGAAAGGTA TATGCAGCATTACAGGTTGTTGACAAGTGCGCATTTTGTTATATGGTGTTTTTATGGAGTTAGGACTAGAGGAACCCTGT AAAACAGATGTGATGTGGTATCATGACGGTAGTCTGATGCGACGGTCATACAACTAGTTGTCAGTTTTGCTGTAGAACTA CAATTGTATGTAATCACAAAATCATAGCTATTAATTGTCTTCTGTTATGAAAATCAAAATGCTTGTTTTCCAAGAATGAG ACTTTAGGTGTACTTGGTTATAAGACTTTACAGTTTTTTTTTAATTGAAAAGAAAATGCTACAATGAATTTACAATCAGA GTTATTAGATATAAAGACAGTAAAACACACTGATCCATGGTCAATACTCAATAATATTTGAGGCTTTGTTGGATTTAAGT GCTACATGGGTTTTGAAAGGTTATCATTATTTTCATCACCACTAATGACGTGTTTTGAAATTTGCTTGCATGGTAACTTG TACACCTGTATTTTACTCTTTGATTCAAGTTACATGACACCAAAGACTTAAAACTCAGCCTTCTTTTTTATGGAAAAGCA ATCAAATTTATTGTTATCTATTTCAAATGAAAAAGTGGTTGGGCAGAGGTATCAGTTTGCATAGAAAGCTAAACAATACT ACTAGTTATTGATGTCAGAAACATTTGTTGGGAGGGACAACAGATGTCAAAGACCAAAAAAAGAAAGCTAAATAATACTA CTAGTTAGTTGATGTCAGAAACAACATGCTTGTATGCTTGAAAATCCATTGGATGGGTGGATCCATATATGCACAACTGT CAAATTCCACTAGTCTTGAGTGAACAAGTTTGATTTTCTTTTTCACCATGTATGGTCCCTAGCCCAAATTGTGAGTAAGA TTTGTATGGATAAGATTCCATTTTATTTTCGGAAGCTTGATTTCCTTCTCAATAAGATGTTTTGAATTTGTTTGACAGGT AAAGCAGAAAACACTGATAATATGGGGTGAAAATGACCGCATCATCAGCAATAAGCTTGCAGTGGTTAGTTACCATCTCA CACTATTTTTATAGCATGTGACTGACGAGAAATCTTTAAGACTGGAAGTTGAAATCTGAACTTTTACTCTTGCAGCAACT ACACTGTGAATTACCTGATGCAATTTTACGCCAAATACCCGATTGTGGGCATCTTCCTCATTTGGAAAAACCAGATTCTA CCATCAAATTAATTGTTGAATTTATGAAGAAAGAGACCAAGAAGTTAAGTGAATGTGTTTCACAAGTATGAATGGGGAAC ACCTGTTTTGCCCTTCTCTAACAAAGAAGGCACCTGAGCAGTTCAACATTTGGCAAACAATGCAGGTGGTAGAGCAAAAT AAGTTTTTAGAATGCTCTTTCCCTTACTAGATTTATAGATATACTAATAGCATGTTTGGATCAACTTATTTTTCTTCAAA ATCAATTCTGACATGTAGAAGCTACTCATAG
CDS sequence (LotjaGi2g1v0295200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTAGTTGTGTGAAGCCATTGGTGCAGAGCAAGGAACCTCCAATTGTCCTTCTACATGGTTTTGACAGTTCATGTTT AGAATGGAGATACGGACATCCTCTGCTTGAAGAATCTGGATTTGAGACCTGGGCCATTGACATTCTTGGTTGGGGCTTCT GTGATTTAGAAAAACTTCCATCTTGTGATGTGGTATCAAAGCGTGATCACTTCTATCAGTTTTGGAAGTCCTATATCAGA AGGCCAATGATATTGGTTGGACCAAGCCTTGGCTCTGCTGTTGCGATTGACTTTTCAGTCAATTATCCAGAAGCTGTGGA AAAGCTTGTTCTGATGGATGCTAGTGTATATGCAAAGGGAACTGGGAGCCTAGCAACCTTACCAAGATCGGTTGCCTATG CCGGGGTATCTTTATTGAAGAGCATTCCATTACGCTTTTATGCCAACTATCTGACTTTCACCAACACGTCCTTCCGCACC AGCCTTGATTCGGTTAATGTGGGTCGCTTGCATTGTTTATTACCTTGGTGGGATGATGCTACTGTGGATTTTATGACTAG TGGTGGTTACAATGTTGGTTCCCTGATAAGAAAGGTAAAGCAGAAAACACTGATAATATGGGGTGAAAATGACCGCATCA TCAGCAATAAGCTTGCAGTGCAACTACACTGTGAATTACCTGATGCAATTTTACGCCAAATACCCGATTGTGGGCATCTT CCTCATTTGGAAAAACCAGATTCTACCATCAAATTAATTGTTGAATTTATGAAGAAAGAGACCAAGAAGTTAAGTGAATG TGTTTCACAAGTATGA
Protein sequence (LotjaGi2g1v0295200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSCVKPLVQSKEPPIVLLHGFDSSCLEWRYGHPLLEESGFETWAIDILGWGFCDLEKLPSCDVVSKRDHFYQFWKSYIR RPMILVGPSLGSAVAIDFSVNYPEAVEKLVLMDASVYAKGTGSLATLPRSVAYAGVSLLKSIPLRFYANYLTFTNTSFRT SLDSVNVGRLHCLLPWWDDATVDFMTSGGYNVGSLIRKVKQKTLIIWGENDRIISNKLAVQLHCELPDAILRQIPDCGHL PHLEKPDSTIKLIVEFMKKETKKLSECVSQV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 271 | 271 | 4.3E-173 | – | |
| PANTHER | 1 | 271 | 271 | 4.3E-173 | – | |
| Gene3D | 6 | 268 | 263 | 1.1E-41 | ||
| SUPERFAMILY | 12 | 258 | 247 | 1.72E-41 | ||
| Pfam | 16 | 249 | 234 | 1.1E-14 | ||
| PRINTS | 20 | 38 | 19 | 1.1E-8 | ||
| PRINTS | 40 | 55 | 16 | 1.1E-8 | ||
| PRINTS | 40 | 55 | 16 | 1.2E-14 | ||
| PRINTS | 85 | 98 | 14 | 1.2E-14 | ||
| PRINTS | 99 | 112 | 14 | 1.1E-8 | ||
| PRINTS | 99 | 112 | 14 | 1.2E-14 | ||
| PRINTS | 203 | 217 | 15 | 1.2E-14 | ||
| PRINTS | 234 | 256 | 23 | 1.1E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi2g1v0295200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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