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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0295600 |
| Transcript ID | LotjaGi2g1v0295600.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14-3-3-like protein; TAIR: AT1G34760.1 general regulatory factor 11; Swiss-Prot: sp|Q84J55|14331_ORYSJ 14-3-3-like protein GF14-A; TrEMBL-Plants: tr|A0A0K9RR93|A0A0K9RR93_SPIOL Uncharacterized protein; Found in the gene: LotjaGi2g1v0295600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77040446..77042575) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTGCGGAGAAAGAGAGAGAGACCCAGGTTTACTTGGCCAAGCTTGCTGAACAGGCCGAGAGATATGAAGGTTCTTC CCTATTTTTCTTTCTTTTTCTTTTCATTGTTGTTGTTTCCTTCATGGGATTTACGTTTTTTTTATTCTGACATTGGTCTG GACTGGATCTGTTTTTATCAAGAGGTTTGTTCTTGTTTTTATGAAGGAAAACTTAAATCTTGATGGGGATGGAAAATATT TCATTATGAGATTTGTGTCTCTAATGTTGCTTATGGATCATGGATCAGTTTATAGTTTAGATGATTTTCCCTTCAATAAC CCTAAAAAAGGGTCTTTCATGTAATGGTTTGATTTGAAATTTATTTATTTCCAATTAGAATTATATTAAACTTGTAATTG TTTTTATTTTGCATCATAGTATTGGATGCTGGCATGTTATTTGTTTCATTTGATGTATAGATAGAATACATGATGAGGGT GATGATGTTATTTTAAATAATTTGTTTCTCAGTTTGTTATTTTTTGACTTCTCCTTCTGATTGATTTTGGCTTTAGAATC AAGTTGAAGGATTTACAAAGAGGCTCATGTTCATTTATTTATTTGACCTTTTGAGTGTTATGAATTTGCCTGATTAAGTG AACATTTATTTTTGTTAAAGTTTTATTTGGTTAATATTTGTCTGATTTTGCGCGGGTAATGGAAGTCCGCTTTACACTCA GAAGCTGCATTATGTTAGCTTAGGCATTGTTGCATTATGCATACCATAGTGTATAGCTGCCAGCTATCACATGTTGGAAA CTGTTTACAAATTCCAAACAGTTTTTTCGATTTGATATGATGATTGCCCTCTGTAACTTCTTATTTGTTGTTCAGAAATG GTAGAATGTATGAAGAATGTTGCAAAACTTGATCTTGAGCTTACTGTGGAAGAGAGGAACCTCCTCTCAGTGGGATATAA AAATGTCATTGGTGCAAGGAGAGCCTCTTGGCGCATTATGTCCTCAATCGAGCAGAAGGAAGAGACTAAGGGAAATGAGC ACAATGTTAAGCAGATCAAGAATTACCGCCAAAAGGTTGAGGAGGAACTCTCCAAAATTTGTGGTGACATCCTGACTATT ATAGACCAGCATCTAATTCCTTCTTCCGCCTCAGCAGAAGCTAGTGTTTTCTACTATAAGATGTGAGTCACGTTGTTGCG CTGGTTCTGTATTACTTACTTGATTAATTTGATTCTTTATGGAATATTTTCTTTCTTTTAAGCTGATGCAATAGTTTTTG TTTATTATGATTTAAATGATACCATGACGGACCTGAGATTCAAAGAATGTGTATGAATGTGATGATTTTGATTACTGTTT TTTTGTGTATTGCATACTGTTTGTCCACTTGATTGCCTTTTAAATGATATTTTCTTTGCTCTAAGGGGAGTCCAATGTTG TGTGCTGATTTATATTCTGCTCATCATTATGCATATAACATTTCTTATTGCTTGCCACATACTTTGCTTATATATCCCTG ATTTCCTTATCCTTTTGATGCAGGAAAGGTGATTATTATCGGTATCTTGCTGAGTTCAAGACCGACCAAGAAAGGAAAGA GGCAGCCGAGCAGTCACTCAAGGGATATGAGGTTTGTGTTTGTGTTTGATCTCTTGTATTTCTGCATCGAAGTGATTCAT AAATAAAATGCAGTGTCCTTGACTTTTCAAAAATATTTTGATTATTAGGCTGCTTCAGCCACTGCCAACACCGATCTTCC ATCAACACATCCAATCCGTCTTGGACTTGCTCTCAACTTCTCTGTCTTTTATTACGAGATCATGAACTCTCCTGAAAGGT TAGTTATTATTTCTCTCATATACTTCATGGGTCCATTGAATTGCTTGTGTTGTAGCTCTTGTCTCAATGTCATTACTGAA TCTTGCAGGGCCTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGACACCTTGAGTGAAGAGTCATA CAAGGACAGTACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTCTGGACATCCGATTTGCCAGAAGATGGAGGTA GGGGAACGGTTAAAACTTGATCTTCTAAGATGCATTTGAGTTTTACCTGA
CDS sequence (LotjaGi2g1v0295600.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCGGAGAAAGAGAGAGAGACCCAGGTTTACTTGGCCAAGCTTGCTGAACAGGCCGAGAGATATGAAGAAATGGT AGAATGTATGAAGAATGTTGCAAAACTTGATCTTGAGCTTACTGTGGAAGAGAGGAACCTCCTCTCAGTGGGATATAAAA ATGTCATTGGTGCAAGGAGAGCCTCTTGGCGCATTATGTCCTCAATCGAGCAGAAGGAAGAGACTAAGGGAAATGAGCAC AATGTTAAGCAGATCAAGAATTACCGCCAAAAGGCTGCTTCAGCCACTGCCAACACCGATCTTCCATCAACACATCCAAT CCGTCTTGGACTTGCTCTCAACTTCTCTGTCTTTTATTACGAGATCATGAACTCTCCTGAAAGGGCCTGCCATTTGGCTA AACAAGCTTTTGATGAGGCAATTGCAGAGTTGGACACCTTGAGTGAAGAGTCATACAAGGACAGTACTTTGATCATGCAG TTGTTGAGAGACAACCTGACTCTCTGGACATCCGATTTGCCAGAAGATGGAGGTAGGGGAACGGTTAAAACTTGA
Protein sequence (LotjaGi2g1v0295600.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAEKERETQVYLAKLAEQAERYEEMVECMKNVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEETKGNEH NVKQIKNYRQKAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQ LLRDNLTLWTSDLPEDGGRGTVKT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 91 | 89 | 8.4E-107 | – | |
| Gene3D | 3 | 94 | 92 | 2.1E-37 | ||
| PANTHER | 3 | 91 | 89 | 8.4E-107 | ||
| SUPERFAMILY | 6 | 172 | 167 | 6.15E-69 | ||
| SMART | 7 | 183 | 177 | 7.9E-101 | ||
| Coils | 13 | 33 | 21 | - | – | |
| Pfam | 13 | 93 | 81 | 5.5E-28 | ||
| ProSitePatterns | 45 | 55 | 11 | - | ||
| Pfam | 92 | 170 | 79 | 4.2E-39 | ||
| PANTHER | 92 | 180 | 89 | 8.4E-107 | ||
| PANTHER | 92 | 180 | 89 | 8.4E-107 | – | |
| Gene3D | 95 | 179 | 85 | 1.3E-44 | ||
| Coils | 130 | 150 | 21 | - | – | |
| ProSitePatterns | 152 | 171 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0295600.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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