Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0312400 |
| Transcript ID | LotjaGi2g1v0312400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase; TAIR: AT1G10430.1 protein phosphatase 2A-2; Swiss-Prot: sp|Q9ZSE4|PP2A_HEVBR Serine/threonine-protein phosphatase PP2A catalytic subunit; TrEMBL-Plants: tr|V7CKW4|V7CKW4_PHAVU Serine/threonine-protein phosphatase; Found in the gene: LotjaGi2g1v0312400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78722034..78727121) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTTCTGTTTTGGCTACCAGAAAGAAAGAAACTGCGAGATTCAAAGAAGAGAAAAAAGAAAAACACACACACGTACAC ACCCAAATGAAATGATTATTATTGTCGACAGAGCGAAGAAGAACAACAACAACAAACCTTCAAAACGGTTCGTTTCGCTC CACGCGTTTCGCATCGGAACTACCACCCCTTCCCCGACGCATCTCCGGTCGCCACCGTCGGCGACGTCTCCCCACTCGGA TTGACCCGACCCGATTGTTATCGCACGATCTGCGATCTCGGAGCGGTTTCTGGATCTGAGAACGATGCCGTCTCACGCGG ATCTGGACCGGCAGATCGAGCACCTCATGGAGTGCAAGCCTCTGCCGGAGGCGGAGGTCAAGGCTCTGTGCGACCAGGCG AGGACGATTCTGGTCGAGGAGTGGAACGTTCAGCCGGTGAAGTGTCCTGTCACGGTGTGTGGTGATATTCATGGCCAGTT CTACGATCTCATCGAGCTTTTTCGGATAGGAGGAAGTGCACCTGATACCAATTATCTCTTCATGGGCGATTATGTAGGTG AGTTTTCTCTTCTACAATTCTCTCTCTCGAATTTATGAGCTGAATTTTGTGTAGATAGGGTTTGATTTTGTTTCTGTAAA TTGATTGCTGCTGTGTTGTTATTATTGAATTTTGTTTAATTGGGTTTTGATGTTGGAATTTTGGTACTGTTTTTGATTTT ATGTTATGATTATTGTTTCATGCGTTGATGCTCTTTTGAGAACCGTTTCGCCTGTTATTTTTTGTGTTTGTTTTGTAGAA AATGGAAATTTTGCTATATTGGGACTTTTTAGCTGGTTATGTTGGTTTTGACAAATTAATTAGTAGGGGACTTACTGTTT GAAATCGTTGTGTAACTATGGAAGTGGTACTAGTACATTCAGCTGGTTTCTTCCGCGATATAGTGATATGCTGTCAGCTA GTTTGGATCATATTCAAGGCTTTTCCGTGATCATGGGGTACTAGTTATGCTTGTCTTAATAACCTTGTTATTTGTACATC TTGGGTTCATATTGTGTCTGTAAGGTGACGCCACTGTTGAAATTTGAAATCACTAAGAACCTCGTGTTTTGAGGTCCTGG TTTTAGTTATAAGCTAACCGACATTTGTTGAAAGGAGAATTGCTAGATGATACACCCCCGCCCCCCGATCCCGGAGTGCT AGGTGTCAATGATTGAATTTTGATAAAGAAGGTGGGTTTGGATAAAAAATGTAGTCATTAGATCTTATTATGGGATGTGG TTAGCTGGTTACAATCACGCCCTAAGGAGTAGGCCCATACGGTGGTAAAATACAATGACAAAATGTGGGATGTAAGTTGA GCATGAAATATTGAATAAATCAGAAATAATCCTGTTTGTTGTGATATTAATTTTATGTTTCTATATTAGAAGAATGATGA CAGAAAGGAAAGATTGTTCATGAATTCTTGATGGCAAATGAAACTGGAAGTTGTATGGGAGGATTTTTATAGGATAAATG TCAGTGGGAAGTTAAGCTCAACGGAGTCAATTGTCAAAGTGTCAGTTGATTTTGACAAATTTTTCCATGAGGTATCAAAA CTAGGTTTTACTATAATGTGACGTTAAGTGAAGGATATGATACTATGACGCTTAACAACTTAAATATGCGATGATGATAC AACTTGCAAGTTTCAGATATGGTAATTACTAAGGTGTCAACTTGGGGCCACAATCATCCTCTTTTTTTGTTGTTGGTGTC ATACTTCTTTTTCATGTTCAAATTATTAGACTCTCTGAATTTAATGGAACTTCTACCATTTACTCATGATTGGCTAAATT TATGCAGATCGTGGGTATTATTCAGTGGAGACTGTTACACTTTTGGTGGCCTTGAAAGTACGCTACAGAGATAGAATTAC AATTCTCAGGGGCAATCATGAGAGCCGTCAAATCACTCAAGTGTAAAAACATTTCCTTTTCATTCTATGTTGTTCACACA GCTCATTGTAATTTCTGGATGTATATATGTATGATGTTTAAGCAGAAATTTTGGTATATATCTTGCTTGAAGTTAGAGAA TAGGTCAAGTGTGTGCAGCCATAATTCATTGGATTTACCAAATACAACTAGTCTTATCTCATAGAAACTTTGAAGGTTAA GAAGCAGCAGCATGATTTTGTTATATGACCGTGGCATTCTTCTTTTACTATCTTTCTTACCATATTATGATGTGTTGTCC CGTTATTAGGTCATCATAAATGAGCGTAGTTTGCAAATAGATGTAATTGAATGAGTGTAGGATGCAAATAGATGTACTTT ATTGTTAGTGAACTGTCCCTTCTCTTTATTGCTGAGGCTAGTGTTTTAGTCACTTTTCACTGCTTTATAGAAAGAGTTGT CAAGAGCATGGTGAATTGATTGTGAAATTATACTTAAATTGAAATGAACCTGGTATGGGGATGCTAGAGGGGTGCTTAAC TGAAACATTATATAGCCAGCTTGTAAGGTGCATCAGAACATGAATTCATGCATTGTGCTTGTGAACTCCAATTTGTTAGT GACTTAGTGATTTGGAGGTATATAATAAGGAAAAAAATGTTCTATTTGAACACGTAAAACACAAGGATTTTATTTTGTTT GCTTACCATTTCATCAATATCAGTCACCTGCTTTCAGGTATGGCTTCTATGATGAATGCTTGAGAAAATATGGAAATGCC AATGTCTGGAAATTCTTTACCGACTTGTTTGATTATTTACCTTTGACTGCCCTCATCGAGAGTCAGGTTTGAGTTAAATA TGTTTCAGAATATTTCTCTGACTACTTAATGCCTGAGCCTGACATCCATGTATAATTACAGATTTTCTGCTTGCATGGAG GTCTCTCTCCGTCTTTGGATACATTAGATAATATCCGTGCCTTGGATCGCATACAGGAGGTTTGTGTGTTATTAAATGGC TATTGCAAGCTCTGTGATTACAAATCATTTGATACGAAGAACATTTTATACGAAGCATGCTCTTTTGAGTTAAAGATATA TTTTTAAAATATGGTATGAAAAGTAATTTGATATTTTACTTGATGTTGCAACTATTATAGTATGCGATACTCTTGTTTTT TTATGGAAATGTTTCATGTTGTCTAGGGTTTACAATGATTTCTGCACTTTCCTTTTATTTAGTTGATTCAACTATTTAAT AATTTTTTCAGCCTTATCGGGTGCTCTTAGGAAATCTCAGTCTTTCAGTCCACTATTGAATTTAATTGGTTTACATACGT CTTATCTAAAACTATACTGACAAGGTTAAGTGGATATCATGCCTGACAAGTGACAACTGTACTTGTGCGATATAGGTTCC GCATGAAGGACCAATGTGTGATCTCTTGTGGTCTGATCCTGATGATCGTTGTGGTTGGGGAATATCTCCACGTGGTGCTG GATATACATTTGGACAGGATATAGCTGGTCAGTTCAACCATACCAATGGTCTCTCCCTGATATCTAGAGCTCACCAGCTT GTCATGGAAGGGTACAATTGGTGCCAGGTGACTGACCTAATATTTTGTCTCCATATATTTATCGTATTTCTTAAAAAAAA ATCAAGTATGCCAAGTATATTGACTATTGTTTTGATAACTCTTTAAGGAGAAGAATGTGGTAACTGTTTTTAGCGCTCCA AATTACTGTTACCGATGTGGGAATATGGCTGCCATACTGGAAATTGGAGAGAATATGGAACAGAATTTTCTGCAGTTTGA TCCAGCTCCCAGGCAAATTGAGCCTGACACTACACGAAAGACTCCGGATTATTTTTTGTAACTTCCTACATCTCTCTGTT TGTAGTTACTGCTTTCTGCTGTTACTATAGTTTGTGTCTTCAAGGAAAGGGGAGATTCACTTTAAGTGGAGGATTATCAT CAACTTAATTCTTTCTTGTGGAGTTTGTCTGCTGCTGCTGCCGCCCCGTCTTATTTGGACAAAAAACCAATAGAATTGAC ACCATTGGTACTGTATATTTTTTATAGGAGGAAGCGGCAGTAACATGGTATATCTTGTGCTGTAATTTTTCTTCTTTTAT TAAATCTCAAGCTAGAGAGCAGATTTTTGTGTTCTGACCATCATGTTCATTTAAAGACTCTGGATGGTGACAAATTGCAG GTATTGATTTTACATAATTGAGTGATAATATGATATCATAGGTAGAAATAGGATTGAGTGGAAACTGTTGCATCGAGACT GCAGCAAAAGGGATGTTTGCATAGTTTTTTAGTTAACATGTTTTTATGAATAAGTATAAAATAGTGTTATTTTATGTTAT TTCTATTTTTAGGGTTTTGTAAAGAATATAATGAAAGTAATCTTGCAAAACTCAAAAAAGAAATAAAATAATAATGGAGT AATATTTTTTATTTAGCAGTGGAAGTAGATGACCATAAATAAAAATAGAAAAGAAACCAAAACACTATTTTGGGACTTCT GAGAACTCATTTCTGTGATTTTTGAATGGACCTAAAATCTTCTGTGATTTTTTGCTTCTTTTGAGAACTCATTTCTGAAC CTTAATTCTTTTTAATTTTTTACCATAATGTGATTTAATTGCGGTCAATTTCATCCTAATTTTCAGGTTTCTGAAGACCA TCCTAATTTTCATACACTTATATTATTAGTGTGTGTTTGGAAAACTTATTCAGGATTCACGTTTGACCTTGATCCACGTT TTCAGAAGCAAGAAATAGTTGCTTTTGGATTTCTGGATCCACGTTTGGCCTCTTCAGATTTGAGACCTAACACACACTTA GTCTCATTTTATTTTTTGTACGTTTCCACTTCGATCCTGATATGAAGGGACGTCTCTATCTCTATGCTACCAATTGCTTG CTTATGAGAAACATTTTGGAAGGTTGAAAATGTTTTTTTTTTAATTTGATTTTGATAATTTATTATTCCACCGTGAGGAG ACTAATGTGGCTTTTATGCCCCATAGTCATAAGACGCAGAATTTCAAATATTTTCTCAAGATCCATATAAATTCTTGAGG TTTTACACTGATTAGAGGAATGCTTAAAATAGGCATTATAAAGGGCAT
CDS sequence (LotjaGi2g1v0312400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGTCTCACGCGGATCTGGACCGGCAGATCGAGCACCTCATGGAGTGCAAGCCTCTGCCGGAGGCGGAGGTCAAGGC TCTGTGCGACCAGGCGAGGACGATTCTGGTCGAGGAGTGGAACGTTCAGCCGGTGAAGTGTCCTGTCACGGTGTGTGGTG ATATTCATGGCCAGTTCTACGATCTCATCGAGCTTTTTCGGATAGGAGGAAGTGCACCTGATACCAATTATCTCTTCATG GGCGATTATGTAGATCGTGGGTATTATTCAGTGGAGACTGTTACACTTTTGGTGGCCTTGAAAGTACGCTACAGAGATAG AATTACAATTCTCAGGGGCAATCATGAGAGCCGTCAAATCACTCAAGTGTATGGCTTCTATGATGAATGCTTGAGAAAAT ATGGAAATGCCAATGTCTGGAAATTCTTTACCGACTTGTTTGATTATTTACCTTTGACTGCCCTCATCGAGAGTCAGATT TTCTGCTTGCATGGAGGTCTCTCTCCGTCTTTGGATACATTAGATAATATCCGTGCCTTGGATCGCATACAGGAGGTTCC GCATGAAGGACCAATGTGTGATCTCTTGTGGTCTGATCCTGATGATCGTTGTGGTTGGGGAATATCTCCACGTGGTGCTG GATATACATTTGGACAGGATATAGCTGGTCAGTTCAACCATACCAATGGTCTCTCCCTGATATCTAGAGCTCACCAGCTT GTCATGGAAGGGTACAATTGGTGCCAGGAGAAGAATGTGGTAACTGTTTTTAGCGCTCCAAATTACTGTTACCGATGTGG GAATATGGCTGCCATACTGGAAATTGGAGAGAATATGGAACAGAATTTTCTGCAGTTTGATCCAGCTCCCAGGCAAATTG AGCCTGACACTACACGAAAGACTCCGGATTATTTTTTGTAA
Protein sequence (LotjaGi2g1v0312400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSHADLDRQIEHLMECKPLPEAEVKALCDQARTILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSAPDTNYLFM GDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFDYLPLTALIESQI FCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAGQFNHTNGLSLISRAHQL VMEGYNWCQEKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPDYFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 306 | 306 | 1.0E-220 | – | |
| PANTHER | 1 | 306 | 306 | 1.0E-220 | – | |
| Gene3D | 2 | 303 | 302 | 1.0E-129 | ||
| SUPERFAMILY | 6 | 293 | 288 | 6.15E-117 | – | |
| CDD | 6 | 290 | 285 | 0.0 | – | |
| SMART | 20 | 290 | 271 | 6.8E-152 | ||
| Pfam | 48 | 239 | 192 | 3.2E-35 | ||
| PRINTS | 48 | 75 | 28 | 2.2E-91 | ||
| PRINTS | 77 | 104 | 28 | 2.2E-91 | ||
| PRINTS | 110 | 134 | 25 | 2.2E-91 | ||
| ProSitePatterns | 111 | 116 | 6 | - | ||
| PRINTS | 145 | 171 | 27 | 2.2E-91 | ||
| PRINTS | 174 | 201 | 28 | 2.2E-91 | ||
| PRINTS | 230 | 250 | 21 | 2.2E-91 | ||
| PRINTS | 252 | 268 | 17 | 2.2E-91 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi2g1v0312400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…