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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0312400 |
| Transcript ID | LotjaGi2g1v0312400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase; TAIR: AT1G10430.1 protein phosphatase 2A-2; Swiss-Prot: sp|P23636|PP2A2_SCHPO Major serine/threonine-protein phosphatase PP2A-2 catalytic subunit; TrEMBL-Plants: tr|S1RW33|S1RW33_THECC Serine/threonine-protein phosphatase; Found in the gene: LotjaGi2g1v0312400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78723301..78726817) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCGTCTCACGCGGATCTGGACCGGCAGATCGAGCACCTCATGGAGTGCAAGCCTCTGCCGGAGGCGGAGGTCAAGGC TCTGTGCGACCAGGCGAGGACGATTCTGGTCGAGGAGTGGAACGTTCAGCCGGTGAAGTGTCCTGTCACGGTGTGTGGTG ATATTCATGGCCAGTTCTACGATCTCATCGAGCTTTTTCGGATAGGAGGAAGTGCACCTGATACCAATTATCTCTTCATG GGCGATTATGTAGGTGAGTTTTCTCTTCTACAATTCTCTCTCTCGAATTTATGAGCTGAATTTTGTGTAGATAGGGTTTG ATTTTGTTTCTGTAAATTGATTGCTGCTGTGTTGTTATTATTGAATTTTGTTTAATTGGGTTTTGATGTTGGAATTTTGG TACTGTTTTTGATTTTATGTTATGATTATTGTTTCATGCGTTGATGCTCTTTTGAGAACCGTTTCGCCTGTTATTTTTTG TGTTTGTTTTGTAGAAAATGGAAATTTTGCTATATTGGGACTTTTTAGCTGGTTATGTTGGTTTTGACAAATTAATTAGT AGGGGACTTACTGTTTGAAATCGTTGTGTAACTATGGAAGTGGTACTAGTACATTCAGCTGGTTTCTTCCGCGATATAGT GATATGCTGTCAGCTAGTTTGGATCATATTCAAGGCTTTTCCGTGATCATGGGGTACTAGTTATGCTTGTCTTAATAACC TTGTTATTTGTACATCTTGGGTTCATATTGTGTCTGTAAGGTGACGCCACTGTTGAAATTTGAAATCACTAAGAACCTCG TGTTTTGAGGTCCTGGTTTTAGTTATAAGCTAACCGACATTTGTTGAAAGGAGAATTGCTAGATGATACACCCCCGCCCC CCGATCCCGGAGTGCTAGGTGTCAATGATTGAATTTTGATAAAGAAGGTGGGTTTGGATAAAAAATGTAGTCATTAGATC TTATTATGGGATGTGGTTAGCTGGTTACAATCACGCCCTAAGGAGTAGGCCCATACGGTGGTAAAATACAATGACAAAAT GTGGGATGTAAGTTGAGCATGAAATATTGAATAAATCAGAAATAATCCTGTTTGTTGTGATATTAATTTTATGTTTCTAT ATTAGAAGAATGATGACAGAAAGGAAAGATTGTTCATGAATTCTTGATGGCAAATGAAACTGGAAGTTGTATGGGAGGAT TTTTATAGGATAAATGTCAGTGGGAAGTTAAGCTCAACGGAGTCAATTGTCAAAGTGTCAGTTGATTTTGACAAATTTTT CCATGAGGTATCAAAACTAGGTTTTACTATAATGTGACGTTAAGTGAAGGATATGATACTATGACGCTTAACAACTTAAA TATGCGATGATGATACAACTTGCAAGTTTCAGATATGGTAATTACTAAGGTGTCAACTTGGGGCCACAATCATCCTCTTT TTTTGTTGTTGGTGTCATACTTCTTTTTCATGTTCAAATTATTAGACTCTCTGAATTTAATGGAACTTCTACCATTTACT CATGATTGGCTAAATTTATGCAGATCGTGGGTATTATTCAGTGGAGACTGTTACACTTTTGGTGGCCTTGAAAGTACGCT ACAGAGATAGAATTACAATTCTCAGGGGCAATCATGAGAGCCGTCAAATCACTCAAGTGTAAAAACATTTCCTTTTCATT CTATGTTGTTCACACAGCTCATTGTAATTTCTGGATGTATATATGTATGATGTTTAAGCAGAAATTTTGGTATATATCTT GCTTGAAGTTAGAGAATAGGTCAAGTGTGTGCAGCCATAATTCATTGGATTTACCAAATACAACTAGTCTTATCTCATAG AAACTTTGAAGGTTAAGAAGCAGCAGCATGATTTTGTTATATGACCGTGGCATTCTTCTTTTACTATCTTTCTTACCATA TTATGATGTGTTGTCCCGTTATTAGGTCATCATAAATGAGCGTAGTTTGCAAATAGATGTAATTGAATGAGTGTAGGATG CAAATAGATGTACTTTATTGTTAGTGAACTGTCCCTTCTCTTTATTGCTGAGGCTAGTGTTTTAGTCACTTTTCACTGCT TTATAGAAAGAGTTGTCAAGAGCATGGTGAATTGATTGTGAAATTATACTTAAATTGAAATGAACCTGGTATGGGGATGC TAGAGGGGTGCTTAACTGAAACATTATATAGCCAGCTTGTAAGGTGCATCAGAACATGAATTCATGCATTGTGCTTGTGA ACTCCAATTTGTTAGTGACTTAGTGATTTGGAGGTATATAATAAGGAAAAAAATGTTCTATTTGAACACGTAAAACACAA GGATTTTATTTTGTTTGCTTACCATTTCATCAATATCAGTCACCTGCTTTCAGGTATGGCTTCTATGATGAATGCTTGAG AAAATATGGAAATGCCAATGTCTGGAAATTCTTTACCGACTTGTTTGATTATTTACCTTTGACTGCCCTCATCGAGAGTC AGGTTTGAGTTAAATATGTTTCAGAATATTTCTCTGACTACTTAATGCCTGAGCCTGACATCCATGTATAATTACAGATT TTCTGCTTGCATGGAGGTCTCTCTCCGTCTTTGGATACATTAGATAATATCCGTGCCTTGGATCGCATACAGGAGGTTTG TGTGTTATTAAATGGCTATTGCAAGCTCTGTGATTACAAATCATTTGATACGAAGAACATTTTATACGAAGCATGCTCTT TTGAGTTAAAGATATATTTTTAAAATATGGTATGAAAAGTAATTTGATATTTTACTTGATGTTGCAACTATTATAGTATG CGATACTCTTGTTTTTTTATGGAAATGTTTCATGTTGTCTAGGGTTTACAATGATTTCTGCACTTTCCTTTTATTTAGTT GATTCAACTATTTAATAATTTTTTCAGCCTTATCGGGTGCTCTTAGGAAATCTCAGTCTTTCAGTCCACTATTGAATTTA ATTGGTTTACATACGTCTTATCTAAAACTATACTGACAAGGTTAAGTGGATATCATGCCTGACAAGTGACAACTGTACTT GTGCGATATAGGTTCCGCATGAAGGACCAATGTGTGATCTCTTGTGGTCTGATCCTGATGATCGTTGTGGTTGGGGAATA TCTCCACGTGGTGCTGGATATACATTTGGACAGGATATAGCTGGTCAGTTCAACCATACCAATGGTCTCTCCCTGATATC TAGAGCTCACCAGCTTGTCATGGAAGGGTACAATTGGTGCCAGGTGACTGACCTAATATTTTGTCTCCATATATTTATCG TATTTCTTAAAAAAAAATCAAGTATGCCAAGTATATTGACTATTGTTTTGATAACTCTTTAAGGAGAAGAATGTGGTAAC TGTTTTTAGCGCTCCAAATTACTGTTACCGATGTGGGAATATGGCTGCCATACTGGAAATTGGAGAGAATATGGAACAGA ATTTTCTGCAGTTTGATCCAGCTCCCAGGCAAATTGAGCCTGACACTACACGAAAGACTCCGGATTATTTTTTGTAA
CDS sequence (LotjaGi2g1v0312400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGTCTCACGCGGATCTGGACCGGCAGATCGAGCACCTCATGGAGTGCAAGCCTCTGCCGGAGGCGGAGGTCAAGGC TCTGTGCGACCAGGCGAGGACGATTCTGGTCGAGGAGTGGAACGTTCAGCCGGTGAAGTGTCCTGTCACGGTGTGTGGTG ATATTCATGGCCAGTTCTACGATCTCATCGAGCTTTTTCGGATAGGAGGAAGTGCACCTGATACCAATTATCTCTTCATG GGCGATTATGTAGATCGTGGGTATTATTCAGTGGAGACTGTTACACTTTTGGTGGCCTTGAAAGTACGCTACAGAGATAG AATTACAATTCTCAGGGGCAATCATGAGAGCCGTCAAATCACTCAAGTTCCGCATGAAGGACCAATGTGTGATCTCTTGT GGTCTGATCCTGATGATCGTTGTGGTTGGGGAATATCTCCACGTGGTGCTGGATATACATTTGGACAGGATATAGCTGGT CAGTTCAACCATACCAATGGTCTCTCCCTGATATCTAGAGCTCACCAGCTTGTCATGGAAGGGTACAATTGGTGCCAGGA GAAGAATGTGGTAACTGTTTTTAGCGCTCCAAATTACTGTTACCGATGTGGGAATATGGCTGCCATACTGGAAATTGGAG AGAATATGGAACAGAATTTTCTGCAGTTTGATCCAGCTCCCAGGCAAATTGAGCCTGACACTACACGAAAGACTCCGGAT TATTTTTTGTAA
Protein sequence (LotjaGi2g1v0312400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSHADLDRQIEHLMECKPLPEAEVKALCDQARTILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSAPDTNYLFM GDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAG QFNHTNGLSLISRAHQLVMEGYNWCQEKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQIEPDTTRKTPD YFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 123 | 123 | 1.5E-166 | – | |
| PANTHER | 1 | 123 | 123 | 1.5E-166 | – | |
| Gene3D | 2 | 121 | 120 | 3.3E-51 | ||
| SUPERFAMILY | 6 | 230 | 225 | 2.89E-83 | – | |
| SMART | 20 | 227 | 208 | 8.5E-90 | ||
| Pfam | 48 | 116 | 69 | 8.4E-15 | ||
| PRINTS | 48 | 75 | 28 | 9.7E-32 | ||
| PRINTS | 77 | 104 | 28 | 9.7E-32 | ||
| PRINTS | 110 | 134 | 25 | 9.7E-32 | ||
| ProSitePatterns | 111 | 116 | 6 | - | ||
| PANTHER | 122 | 243 | 122 | 1.5E-166 | – | |
| PANTHER | 122 | 243 | 122 | 1.5E-166 | – | |
| Gene3D | 122 | 243 | 122 | 3.1E-43 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi2g1v0312400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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