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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0314600 |
| Transcript ID | LotjaGi2g1v0314600.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | CC-NBS-LRR disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3; TrEMBL-Plants: tr|G7IZD1|G7IZD1_MEDTR NB-ARC domain disease resistance protein; Found in the gene: LotjaGi2g1v0314600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:78992298..78997286) extracted from Lotus japonicus Gifu genome v1.2.
CTAGACTTAAAAAAAAATGGTAACTTCAGCTGAAATCCCAAACTACATTATTAGTGGTGGATCCCTTGTTGACTTATCTA GTCTATGCAAAATAACTCTTCTCCTTGTCAATATTCCTGCCTCAAACTAGACTACCACAGCATATCTCAACCGCAGAACC TCTTGCATTTTAACATAGGGAGTAAAAACTTGGAAGATGGCTGAGGCTGTGCTTGAAGTTGTGCTTGAGAATTTGAGCTC ACTCATTCGGAAGGAGCTTGGCCTATTTCTGGGTTTCAGTGAAGACTTGAAAAGGCTGTCCAGCACACTCTCTGCAATCA AGGCAACACTTGAAGATGCTGAGGAGAAACAATTCATTGATAGAGCTATTAAGGATTGGCTGCAAAAGCTGAAAGATGCT GCTTACGTTCTCGATGACATCTTGGACGAGTGTGCAACCGAAGCAATGGAGATGGAGAATGGAGGATTTTTGTGTGGTTT ATCAGACAAGGTACAAAGCTCTTGCTTATCCTCTTTTCATCCCAAGCATGTCGTTTTCTGTCATAATATTGCTAAGAAAA TGAAGAGGATAAGGGAGAGGTTAGATGAAATTGCTAAAGAAAGGAGTAGGTTTCATTTAACTGAGATAGTTACAGAAAGA AGAGATGACTGGCGCCAAACCACCTCAATCATCAATCAACTTCAAATCTATGGAAGAGATGAAGATACGGATAAAATTGT AGACTTTTTGGTTGGTGATGCTTCTGGTTTTGAGGATTTAACAGTATATCCAATACTAGGTCTAGGTGGACTTGGAAAAA CAACACTTGCCCAGCTTATCTTCAATCATGAGAGGGTAGTCAACCACTTTGAACAAAGAATTTGGGTGTGTGTTTCCGAA GATTTCAGTTTGAAAAGAATGGCAAAATCTATCATAGAATCAGCAACCGGGCATCCCTGTGCAGATCTAGATCTAGACCC GCTGCAGCGGAAACTTATGGATTTACTGCAAAGAAAAAGATATTTGCTTGTTTTGGATGACGTGTGGGACGATGAACAAG AGAATTGGCAGAGGTTGAAATCTGTACTGAAATGTGGAGGAAAGGGTGCTTCAATTTTGGTCACTACTCGTCTCCCAAAA GTTGCAGTAATCATGGGAACAATGCCTCCTCATGAATTATCAATGTTATCTGATAATGATTGCTGGGAATTGTTTAAACT ACGAGCATTTGGATCAAATGAGGTAGAGAGGGCAGAGCTTGTGGTCATCGGGAAGGAGATAGTAAAGAAGTGTGGCGGAG TGCCTCTTGCAGCAATAGCACTAGGAAGTTTGTTGCGCTTTAAAAGAGAGGAAAAAGAATGGTTCTATGTCAAGGAAAGC AAACTGTGGAGTTTACAAGGTGAGAATGCTGTCATGCCTGCCTTGAGACTTGGTTACTTGAACTTGCCTGTAAAATTGAG ACAATGTTTTGCATTCTGTGCATTATTTCCTAAAGATGAAAGATTAAGCAAACAATTTCTAATCCATCTTTGGATTGCTA ATGGCTTGATTTCTTCCAATGAAAGGTTGGATGTTGAAGATGTCGGAGATGAGTTGTGGAATGAATTGTATTGGAGATCA TTTTTCCAAGATATTCAGACAGATAAGTTTGGCAAAATTACATGTTTTAAGATGCATGATCTGGTTCATGATCTTGCTCA ATCTGTCGCTGAGGAAGTCTTTTGCAGTGCAGATAATAATGATATAAATGATGTGTCTGAAAGAATCCTCCACCTCTCAA TTTATGGCAATTCAATCCAGTTGCACCGATTCAAATCTTTGAAAACCTGCACAATGGGGAAACATTGTTATTATCCTAGG CAACTTTTACCAAAGATATTGAAATGCCAGTCGTTGCGGGTGCTTGAGTGCAGACGACTAGTAAGTTTGTCAACTTCAAT TGGTCATTTAAAATATATAAGATACTTAGATATTTCTTATGGCAGCTTCAGAACTCTTCCAGAATCCCTTTGTAGCCTGT GGAATTTGCAGATATTGAAATTGGACTACTGTCGTAGTCTACAAGAGTTGCCAAATAATTTGGTGCGCTTAAAATCTCTT CAACATCTATCCTTGACGCATTGCACCTCATTATGGAGCTTGCCTTATCGGATGGGGCTGTTGACTTGTCTTAGGACTTT AAGCATGTATTTTGTTGGCAATGAAAAAGGGTTCCATTTGGCAGAACTAGGACAACTGAACCTTAAAGGAGAGCTTCACA TTAAGCACCTAGAGCGCGTGAAAGGCATAATGGATGCCAAAGAAGCCAACATGTCTAGTAAGCACCTGAACCATTTGCAG CTGTCATGGGGGAGAAATGAAGAGTCCCAATCACAAGAAAATGTTGAGCAGATTCTTGATTTGCTTCAACCTCATACACA ACAACTTCAAACTCTACTTGTGGAAGGATATAGAGGTGCATGTTTCCCACAATGGATGTCCAGTCCTTCCCTCAGATACT TAAATTATTTAATACTCTTGGATTGCAAATGCTGTTTATACCTTCCGCAGCTGGGGAAACTACCTTCTCTGAAGTATCTA AGTATATCTAACACGAGTAAAGTAATATACTTATACGAGGAGCCATGTGATGTTGGAGTTGCAGGAATTTTCATAGCTCT GGAATCTCTGAAGCTGAATGAGATGTCAAACCTGATAAGGTTATCAAGGGAGGATGGCGAGAACATGTTCCCGCGCCTTT CAAAACTTCAAATTATTGGATGTCCAAATTTGTTGGGCTTGCCTCGCCTTCCATCTCTCAATCGGCTAAAGATACAGGGG AAATGCAACACAGATTTACTAAGTTCAATTCTTAAATTCCGTAGTCTTGAACACCTATACTTGGGATGGAATGAAGAGCT AACTTGCTTTCCAAATGGGATGCTAAGTAACCTTCCTTCTCTGAAGATACTGGACATTTGTAGGTACTCCAAACTTGAGG AGCTACCCCCAAATGAAATTGCTAACCTTGATGCTCTTCACCATCTGGATATATACCGTTGCGACAGCCTCAAGTCATTA ACAAATGAAGTGTTGCGAGGGTTGCAGTCTCTCAAGAAATTATTTATTGCTGGTTGCCCTGAGTTCAATCTGTCTTCAGG TTTTCAATACCTAACTTGCCTTGAGAGTTTGGAGATTCGTGGTATCTCAGAAATGAGGGGTTTACATGAGGCTTTACAAC ATATGACTACCCTGGAATCTTTAACATTGTCTGATCTTCCAAACTTAGATTCCCTACCTGCCTCCTTGGAAAATCTTGGC GCGCTTCGGTCATTAATCATTTCTGAGTGTCCTAAGTTAAGGTGTCTTCCAATGAGCATTCAATGCCTTAGCTGCCTGGA ACAGCTGAGTATTATCGGTTGCAAAGAGTTAGGCAAGCGATGTGACAAGGAAGCTGGCGAGGATTGGCCAAAAATAGCTC ACATTCAACGTGTTGAAATACAAACCTAGGGAGTGCGCTTCAGCATAGGACACTGCAGGTTTATTCTTATCTCTCTCTCA TCATAAAATCAAGGGAACACACAAATTTTATTTAGAAAAATATTAAAAATTACGATCCAAAACACAAGAGTTGGTAGTTA TCCCCTACTACCCTCCACAATTGGTAGTCATTAACTTTATCATATCAGCATTTCTTGCAATTGAGCTAGTGCAAGATTGA AAGAGGGTTGTCATATAAATTGAAGCTTACTAACTCTAGGAACTGTTATCTGCAAACTTAGGCTAGCTTCTGAATATTGG TTCAATTGTTGTAGCATCCGTACATGCTCACTAATGCTTAACCAGAATTTTTAGTTCCCTTGCTGTGGAGTGAAAAGCAG AATGTTTGCTTCACAGAAATTGAGGTTTGGTTAAGTATAAAAGAGCACAGAGACACAATCTGGACTCAGAGATGTAATAA TATTGTTCACTTATATAACCATGTGGCTCTCTAAAGCTACATGAGATTACCATTCTTATAGTGGCTTTTGGTAACCACTT TATTAGCTTCTTCAGATATGAAATTGTGAATTATGGTTTAGTGGTCTTTCTAATTGTGAGTTGAATTGTGGGCATAATAT TTCTTTCATTTTTATCTAAAACTAATGAATTTGTTTGCAGCAAGGGAAGAAATGGACATATTCCTTTTAGAGATTCAAAG CTAACCCGGACATGCAGTCATCATTAGGAGGCAATGCTAGAATTGCAGTCATCTGTACCATGAGCCATGCACGGAGCCAT GTTGAGCAATCAGAAACACCCTCTTATTAGTGAATGTAGTGGTGTCTGATAAATCACTAGTCCAGAAATTTCAGCAAATC CAATCAATTATCAAATCACAGCTCTCCACTTCTGTTCTCTCTTCAGCTTTGTAGATATATGCAACTAGATATTTTTGGTG TATATCTCTCAACCATTTTGCGTTAAAAGGATGCTGAAGCTTTTGTGATATCTCCTCTAAAGAAATTTTATTAGTGTAAA AAGTTTACAACCTTTTCCTTTCACTATTATATGGCATTCCATGACTCAGTACACCTATCCTTAGGAACATTTTCCATGTA AAAACTCATTGTTTTTATCCCACCCCTTATTATTTATTCAACAAATGCCATGTCAGAATTGATTTAAAATCGACTTTACG AAACATGCTTTCTTTGTATATTTTCTGAGACTACTTTGCTAACCATTATTAAGAAAATTATCTCATCTCCTATTGAAAGT AGAAATAAATAATCTCCAACATAACCTTGGTGGTGTTTGTAAGGTTAGAGATTGACATTTAAGTAATTTAAAAGGGTCTC CATCCAGAACTGATATCGTTTTTTCCAAGGTTCAGCACTGATATGTGTTGTACTTGTACTTGTCAGGCTAACACAAACCA TTCCCATATTTAGAGATTTCTTTCATGTGGTTCAAGCCAAGGAAAGCCCAGGAAATCAAAAACCTCCTTTTCCGTATCAA ATTTCAAACTTGCACTACCTTTTGCACCC
CDS sequence (LotjaGi2g1v0314600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAGGCTGTGCTTGAAGTTGTGCTTGAGAATTTGAGCTCACTCATTCGGAAGGAGCTTGGCCTATTTCTGGGTTT CAGTGAAGACTTGAAAAGGCTGTCCAGCACACTCTCTGCAATCAAGGCAACACTTGAAGATGCTGAGGAGAAACAATTCA TTGATAGAGCTATTAAGGATTGGCTGCAAAAGCTGAAAGATGCTGCTTACGTTCTCGATGACATCTTGGACGAGTGTGCA ACCGAAGCAATGGAGATGGAGAATGGAGGATTTTTGTGTGGTTTATCAGACAAGGTACAAAGCTCTTGCTTATCCTCTTT TCATCCCAAGCATGTCGTTTTCTGTCATAATATTGCTAAGAAAATGAAGAGGATAAGGGAGAGGTTAGATGAAATTGCTA AAGAAAGGAGTAGGTTTCATTTAACTGAGATAGTTACAGAAAGAAGAGATGACTGGCGCCAAACCACCTCAATCATCAAT CAACTTCAAATCTATGGAAGAGATGAAGATACGGATAAAATTGTAGACTTTTTGGTTGGTGATGCTTCTGGTTTTGAGGA TTTAACAGTATATCCAATACTAGGTCTAGGTGGACTTGGAAAAACAACACTTGCCCAGCTTATCTTCAATCATGAGAGGG TAGTCAACCACTTTGAACAAAGAATTTGGGTGTGTGTTTCCGAAGATTTCAGTTTGAAAAGAATGGCAAAATCTATCATA GAATCAGCAACCGGGCATCCCTGTGCAGATCTAGATCTAGACCCGCTGCAGCGGAAACTTATGGATTTACTGCAAAGAAA AAGATATTTGCTTGTTTTGGATGACGTGTGGGACGATGAACAAGAGAATTGGCAGAGGTTGAAATCTGTACTGAAATGTG GAGGAAAGGGTGCTTCAATTTTGGTCACTACTCGTCTCCCAAAAGTTGCAGTAATCATGGGAACAATGCCTCCTCATGAA TTATCAATGTTATCTGATAATGATTGCTGGGAATTGTTTAAACTACGAGCATTTGGATCAAATGAGGTAGAGAGGGCAGA GCTTGTGGTCATCGGGAAGGAGATAGTAAAGAAGTGTGGCGGAGTGCCTCTTGCAGCAATAGCACTAGGAAGTTTGTTGC GCTTTAAAAGAGAGGAAAAAGAATGGTTCTATGTCAAGGAAAGCAAACTGTGGAGTTTACAAGGTGAGAATGCTGTCATG CCTGCCTTGAGACTTGGTTACTTGAACTTGCCTGTAAAATTGAGACAATGTTTTGCATTCTGTGCATTATTTCCTAAAGA TGAAAGATTAAGCAAACAATTTCTAATCCATCTTTGGATTGCTAATGGCTTGATTTCTTCCAATGAAAGGTTGGATGTTG AAGATGTCGGAGATGAGTTGTGGAATGAATTGTATTGGAGATCATTTTTCCAAGATATTCAGACAGATAAGTTTGGCAAA ATTACATGTTTTAAGATGCATGATCTGGTTCATGATCTTGCTCAATCTGTCGCTGAGGAAGTCTTTTGCAGTGCAGATAA TAATGATATAAATGATGTGTCTGAAAGAATCCTCCACCTCTCAATTTATGGCAATTCAATCCAGTTGCACCGATTCAAAT CTTTGAAAACCTGCACAATGGGGAAACATTGTTATTATCCTAGGCAACTTTTACCAAAGATATTGAAATGCCAGTCGTTG CGGGTGCTTGAGTGCAGACGACTAGTAAGTTTGTCAACTTCAATTGGTCATTTAAAATATATAAGATACTTAGATATTTC TTATGGCAGCTTCAGAACTCTTCCAGAATCCCTTTGTAGCCTGTGGAATTTGCAGATATTGAAATTGGACTACTGTCGTA GTCTACAAGAGTTGCCAAATAATTTGGTGCGCTTAAAATCTCTTCAACATCTATCCTTGACGCATTGCACCTCATTATGG AGCTTGCCTTATCGGATGGGGCTGTTGACTTGTCTTAGGACTTTAAGCATGTATTTTGTTGGCAATGAAAAAGGGTTCCA TTTGGCAGAACTAGGACAACTGAACCTTAAAGGAGAGCTTCACATTAAGCACCTAGAGCGCGTGAAAGGCATAATGGATG CCAAAGAAGCCAACATGTCTAGTAAGCACCTGAACCATTTGCAGCTGTCATGGGGGAGAAATGAAGAGTCCCAATCACAA GAAAATGTTGAGCAGATTCTTGATTTGCTTCAACCTCATACACAACAACTTCAAACTCTACTTGTGGAAGGATATAGAGG TGCATGTTTCCCACAATGGATGTCCAGTCCTTCCCTCAGATACTTAAATTATTTAATACTCTTGGATTGCAAATGCTGTT TATACCTTCCGCAGCTGGGGAAACTACCTTCTCTGAAGTATCTAAGTATATCTAACACGAGTAAAGTAATATACTTATAC GAGGAGCCATGTGATGTTGGAGTTGCAGGAATTTTCATAGCTCTGGAATCTCTGAAGCTGAATGAGATGTCAAACCTGAT AAGGTTATCAAGGGAGGATGGCGAGAACATGTTCCCGCGCCTTTCAAAACTTCAAATTATTGGATGTCCAAATTTGTTGG GCTTGCCTCGCCTTCCATCTCTCAATCGGCTAAAGATACAGGGGAAATGCAACACAGATTTACTAAGTTCAATTCTTAAA TTCCGTAGTCTTGAACACCTATACTTGGGATGGAATGAAGAGCTAACTTGCTTTCCAAATGGGATGCTAAGTAACCTTCC TTCTCTGAAGATACTGGACATTTGTAGGTACTCCAAACTTGAGGAGCTACCCCCAAATGAAATTGCTAACCTTGATGCTC TTCACCATCTGGATATATACCGTTGCGACAGCCTCAAGTCATTAACAAATGAAGTGTTGCGAGGGTTGCAGTCTCTCAAG AAATTATTTATTGCTGGTTGCCCTGAGTTCAATCTGTCTTCAGGTTTTCAATACCTAACTTGCCTTGAGAGTTTGGAGAT TCGTGGTATCTCAGAAATGAGGGGTTTACATGAGGCTTTACAACATATGACTACCCTGGAATCTTTAACATTGTCTGATC TTCCAAACTTAGATTCCCTACCTGCCTCCTTGGAAAATCTTGGCGCGCTTCGGTCATTAATCATTTCTGAGTGTCCTAAG TTAAGGTGTCTTCCAATGAGCATTCAATGCCTTAGCTGCCTGGAACAGCTGAGTATTATCGGTTGCAAAGAGTTAGGCAA GCGATGTGACAAGGAAGCTGGCGAGGATTGGCCAAAAATAGCTCACATTCAACGTGTTGAAATACAAACCTAG
Protein sequence (LotjaGi2g1v0314600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEAVLEVVLENLSSLIRKELGLFLGFSEDLKRLSSTLSAIKATLEDAEEKQFIDRAIKDWLQKLKDAAYVLDDILDECA TEAMEMENGGFLCGLSDKVQSSCLSSFHPKHVVFCHNIAKKMKRIRERLDEIAKERSRFHLTEIVTERRDDWRQTTSIIN QLQIYGRDEDTDKIVDFLVGDASGFEDLTVYPILGLGGLGKTTLAQLIFNHERVVNHFEQRIWVCVSEDFSLKRMAKSII ESATGHPCADLDLDPLQRKLMDLLQRKRYLLVLDDVWDDEQENWQRLKSVLKCGGKGASILVTTRLPKVAVIMGTMPPHE LSMLSDNDCWELFKLRAFGSNEVERAELVVIGKEIVKKCGGVPLAAIALGSLLRFKREEKEWFYVKESKLWSLQGENAVM PALRLGYLNLPVKLRQCFAFCALFPKDERLSKQFLIHLWIANGLISSNERLDVEDVGDELWNELYWRSFFQDIQTDKFGK ITCFKMHDLVHDLAQSVAEEVFCSADNNDINDVSERILHLSIYGNSIQLHRFKSLKTCTMGKHCYYPRQLLPKILKCQSL RVLECRRLVSLSTSIGHLKYIRYLDISYGSFRTLPESLCSLWNLQILKLDYCRSLQELPNNLVRLKSLQHLSLTHCTSLW SLPYRMGLLTCLRTLSMYFVGNEKGFHLAELGQLNLKGELHIKHLERVKGIMDAKEANMSSKHLNHLQLSWGRNEESQSQ ENVEQILDLLQPHTQQLQTLLVEGYRGACFPQWMSSPSLRYLNYLILLDCKCCLYLPQLGKLPSLKYLSISNTSKVIYLY EEPCDVGVAGIFIALESLKLNEMSNLIRLSREDGENMFPRLSKLQIIGCPNLLGLPRLPSLNRLKIQGKCNTDLLSSILK FRSLEHLYLGWNEELTCFPNGMLSNLPSLKILDICRYSKLEELPPNEIANLDALHHLDIYRCDSLKSLTNEVLRGLQSLK KLFIAGCPEFNLSSGFQYLTCLESLEIRGISEMRGLHEALQHMTTLESLTLSDLPNLDSLPASLENLGALRSLIISECPK LRCLPMSIQCLSCLEQLSIIGCKELGKRCDKEAGEDWPKIAHIQRVEIQT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 2 | 134 | 133 | 1.25837E-17 | ||
| Pfam | 5 | 96 | 92 | 1.4E-22 | ||
| PANTHER | 30 | 1070 | 1041 | 6.8E-173 | – | |
| PANTHER | 30 | 1070 | 1041 | 6.8E-173 | – | |
| Coils | 31 | 51 | 21 | - | – | |
| Coils | 115 | 135 | 21 | - | – | |
| Gene3D | 145 | 316 | 172 | 3.5E-37 | – | |
| SUPERFAMILY | 147 | 421 | 275 | 2.04E-65 | ||
| Pfam | 169 | 387 | 219 | 1.6E-48 | ||
| PRINTS | 190 | 205 | 16 | 2.2E-18 | – | |
| PRINTS | 263 | 277 | 15 | 2.2E-18 | – | |
| PRINTS | 359 | 373 | 15 | 2.2E-18 | – | |
| SUPERFAMILY | 485 | 865 | 381 | 1.53E-27 | – | |
| Gene3D | 546 | 663 | 118 | 2.5E-17 | ||
| PRINTS | 623 | 639 | 17 | 2.2E-18 | – | |
| Gene3D | 664 | 861 | 198 | 2.8E-13 | ||
| SUPERFAMILY | 830 | 1067 | 238 | 1.57E-28 | – | |
| Gene3D | 862 | 1074 | 213 | 8.7E-35 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0314600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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