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LotjaGi2g1v0337100.1

Overview

Field Value
Gene ID LotjaGi2g1v0337100
Transcript ID LotjaGi2g1v0337100.1
Lotus japonicus genome version Gifu v1.2
Description alpha/beta-Hydrolases superfamily protein; TAIR: AT1G32190.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q7ZVZ7|AB17C_DANRE Protein ABHD17C; TrEMBL-Plants: tr|A0A0L9URM7|A0A0L9URM7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0337100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:81413881..81420055) extracted from Lotus japonicus Gifu genome v1.2.

CAAAATCAATGGTTTGTTTTGAAGTTTTTTGAATAGCAAAGAATCATTTTCCAATAAAAAAATGTCAGTTAGCAGAAATA CAATGTGACCTGCTACTCTGTATAACTGACAACTATTGAAGTCATGCACATAAATATAAACTGAGTTTTGTAATTAAGAC CTGTGTCTGTGTCCTTACTTTCTGTTCTGTTTTCTCTCTCACTCTCTCACTCTCTCTGTGTTGTGTTGTTGCCACCACCA CACTCCACTCCACATCTCACACTACAAGCAAACTGTTCCCAACTCCAATCAACATTATCACATCCCTTTCCCATTTCCTT TCCTAGAACTCTGCAAATTTTCTCTGTGGTCCAAACCTCCCATTTTCATCACAATCTTTGCTCTTAACAATCACCAAAAA ATCTTCTCTCTCTCTCTCTCTCTCCCTTATCACAAACCCAAAAAAACTCTGAACCTTCTGGGTCTAAAACAGACCCAGAA TCAGAGTGTTGATATCAGAACCCCCCAGATGCATTCAGAGTCTCTCTAACCATGAAATGAGTTTGAGTTGGTTCATATCT CTTGTTGGGGGGGTGAATGGGTTGCATGGTGTCTCAGCTAGCTGCAAAGTTTGCATTCTTCCCACCTTCTCCACCCACTT ACCAGCTCAAGAAGCGTGACGACGGCAAGCTCACGGTGGTCTCGGCGGCGTCGCCGTCGGTTCCTATTCCTCACGCCGAT GACAGCTCCTTGGATGTTCTGCTTGTTGATACCAAACATGGCAACAAGATTGTGGCGTTTTATCTGAAGAATCCTTATGC TCGTCTCACTCTGCTCTACTCTCATGGCAATGCTGCTGACCTTGGTCAACTCTATGATCTCTTTGTGCAACTCAAGGTCA ATCTTAGAGTTAATCTCATGGGGTTAGTGGTTTTTTTTGTTTCTGTTGATTTGCTCAAGCTAGTTCATCTTCTCTTTTTG TTTCTAAAGAAGGGTTGTTTTTAATTTTTTCCTGTTGTTTTTTGTCTCTGTCTGTTCACATTTCACTTCATTCAATGACC TCACGTTACCACTGACCCTTGTTTTGTATTATCTTGGTGTTTTTAGTTTTTACTCACTCTCTCCTCTTTTAAGAAATATA ATACTTTCATAGTGGCTTTTGTTTAGCATAGATCTGAAATGAAATTAAGTACATCTATTTTCTTGGTTTGGTTTAGATTT TGATGACTTGTCCTTGTGTGTGATTTTAGATCTGGTTGTGAATGTGAATGTGAGTACAAGAATTACCAAATTGCCAATGT CAATGGTTTGGAATGGAAGTCGAAATTAAATCTAGTCAAGGGTAGAGTAGAATCTCATGCTGTGTTCTCACCTAACAAGC CAACAAAAATTGAAAAAAAGTAAAAGTGAAAGGGGAAAAGGTAGCTTGTATCTATGGTTCCTTCTTGGTAGTCCGTAACA ATCTTTTCCAGTGCCATCTTTGTCCTCGTTTTCACTTTCTTTTTCAGTGTAAAGGTACTTGAGTTTTTACCTCTACTTGG ATGGTGACATTACATAGCGTTATCTTGGTGTTTTCTGGAGCTGGAGCCTGGGGCCTATTCTGTGATTTTTTTTACCCCCA CTTCCAACATTGTTTTGCTTTTGTTTCAAAAATGAAATGGAATAAATACACAATCCGAGTTACATTTTCTTTCATTGGAT AGTGACTGATTACTGGGTCTAGAGCTTACTTGAATAGTGAATACATAATGTTTGTGTGAACATAAATTCAGATTACCAAT TGACTTTACCACTCTATGAATTTGACTCAATTTAGCTCATAAAGGGACTTGATCAATTCATATATGGAGAGTGATGTGAT TAATTGATGTAAATACTATTTAAACAATCGAATTGGTGTTACTTCAATATTTTGATGTGCTGAAATTTTCTAGATTAAGC TGAAAAGTTGATATGTTATGCAACATTTTATTTGCAGATATGACTACTCTGGATATGGGGCCTCTACTGGCAAGGTAGGT TATTCTTTGACAAATACAACATTATTTAGTCCTGTTATATTGACAGATGCGCACACACAAGCACAGTTCTATTTTGTTGA AAGGGTACTTACTTCCTGAATAGGATACAGCACCAGATATGGCTTTTTATTCTTTCTCTGCTATGCACCAAATGGTGGTG ATTTCATGTTGTTAGTTTCATATAATTGTTTGGTTTTTTCATTTTGTCTGGTATTGATTGTTTTAATTTGAAAAGTATTT GATTCTGCATTTGAAGCATAAGATAATAGGATGCATAATAGTGCTGTCCTTTGTTTCCAAGGGACAAATTACATTGGAAG TACACAATTCCAAATACACAATCATATGTTTGAGAGATTTATGGTGCCCTGTTGTATAATATAACCTGGGAAGAGCAGTG TTTATCGTCCACATGGATGAAGACAATACAATGCTCTGTGCTGCTAGATTTCTGACCTGTTTGATGTCATTATCGCATTT TCTTTACTTTTGTGTGTTAACATGGAAATAGCTGAAGCATAGGCCCTAATTGACTTTATTGTTTCAACTTGTGTCATAAC ATGTGTGCAATTAGGAATAAATGTTAATTTTCTTCAGAAAAAATTCTATGCATGTTATTGATATGTTATATTGATACTTT CAAATTATGCAGCCTAGTGAATCCAGCACATATGCTGACATAGAGGCTATATATGAATGCCTTGAATCTGAATATGGAGT TGGCCAGGAAGACATAATCTTGTATGGGCAGTCAGTTGGAAGTGGGCCAACGTTGCACTTGGCAGCTAAATTGCCAAGGT TGAGAGGCGTGGTTCTACACAGCGGCATTCTTTCTGGTCTTCGAGTGCTTTGTCATGTCAAGTTCTCATTTTGCTTTGAC ATTTATAAGGTAATATATATAAGAAGGCTATTGATTAAAAAGGAACATCTAGCTTAAGATAAGGTCAGAATACTGAATAA AGTATAGGTAATATGATATCAATACACTTCATAAAACTGAAGTATTGGACAGGTTTTATCTGATTTTTTTGACATGTCAG GAACTAACAATGAAGAACTATTTTTACCAATGTACAATGGTTCAATGCTTCAATTTTTTTGGACCAAAATATCAAATCAA CATAAAATAATTGTAAACTGCTTACAACAACAACCAAGCCTTTTCCTTTAGTTCGGGTTGGCTACATGGATCACCCAAAA CCATCATGCCTTGTGCCCCTTTCATGTAGTAGACTAATTAATCTACTTAAATTTAACCTCTCCATGGAAGCAGACTCTTT TTTAAGATATAGATGTGATTCTTTTGAACAACTAAGGTGTTATTCATGACTCATTATATCTTTTGGTTCAATGGGGAATT CTTTTTCTTTTCCTCTTTTTTGTTATAAGAACGACAAAAAAATTAAATAGGAGTAAGTTTTGTTTCTTGTACAAATTTTA TACAGTTAAGTTAGAAAATCAAAATAACATTGCCATAAATGGATAAAATAGTATTTCCATTTATTCATTAAAATAGGCAA ATTCAAATATTGAAATTAAAAAGAAGCCTAATATTCTGTTTAATTGACACATATGATCTAATTGTAACTTTTCTTCCCAA CCATGCAGAACATAAACAAAATAAAGAAAGTCAAGTGCCCTGTACTGGTAATACATGTAAGTATATGATGCACTGTAATC ATTCTACTTTTCCATATTGTATTTGTTTCTGTTGAAATTTAAAGAAAGTAGTAGATAAAGTAGTTATTGCGCTTAATGAA ACTCTAGTCTTGAACCTTCTCATTATATCCTAAAGCACCCTACCCATCATCCTTCTAGAACTCCATGGTCATAAATAACT GGAGTAGCTAGGCCTGGAGTTCTTACCCTAGTTGCACAGCTAATACAATATTCTACAATATCTTTGGAGAGGAAAGGAGA GAAGGGGGAACTAGGAAACCCTTCACAAGTGATATGCTATTCTAGTTAAGATGGTGTTTGACCGAAGTAAACTTGTACTG TGATTATTGTCTATAAGAAGATCATTTGAAATGTGTAACTTAAACATGAATGGGTAGCATCATAATTGAGAGATTATATA CTGTTACAATTTATAACTCAACGAGATTTTCTTAGCCCAAGTTCATGTTTGATTGAACTGCTATCTGTTAGCCCAAGTTC ATTCTCCTTATTTCTAATAGCATAACATCAATGAGCATGAAGAATTTACTGACTTTAATAGGAATGTCCTCGGGTATGCC CACAGGGAACTTGACAGAGTGATATGATGCAAAATTCAAAGAAATTGTTGTGGGCCATATCCAACCTTTTTCTTGCAGAT AGGGGCATAAGGCTAACAGCAGCTCCAAGGTCACACAAAGCTTGTGTTGCCAATTAGACAAGGAATTGAAATGCCACAAA GATCTTTGAGCTTATTCTGAATTAAACAAAATATCTTGGCTGCCATGTGGTTTAAGGTATCAACTTTCCCACTCAATTGG TGGTGGTTCTGAGTTATGCCTTTAATCAAATTCTAGCCTTCATTGAAATCTTTCATTCACAGCTCCTCCGGTTGCTACAT CTAATTGAACTTTGGAGGGCTAAAATAACCCATAATAGAATATGCGGATAAGTGGATTATCGACTGCCTCTCGAGACAAT GGCTAGGACACAACTATAGAAGACCCTTGTATCTATCCCGTGTCTCAAATAATGTCTCCCTTCCTTTTGATGAAAACCAG TGTTGGTACTTCTGAGTTTGATAGTTTTACTAGGCAGGAAGTATTTGTCAAAGGAGTTTCTCCATCTAATCACATGTTGT GATGGGTCTAGTTGATGGAGAGTGCAACCATGCTTTGGTTTTATCCATTAGAAAGAAAAGGAACAATTTGGGTCTAACTG CATCTTCCGCAATATCATTGAGTTTTACTGTCTCATAAATCTTGAAGAAGATGTCAATGTGGAGATTTGGATTATCTATT TGGATTGTTGTGCTCGAGTGGTTGATTTACATTAAAATAAAATTGCCTCTCCCTCCATTCCCTCCCCCCATCCTCCATCT CTGGGTGTGTAGCATATCAAGTGAGAGTAAGTTCTTGCAAAAGAACTAATCTTGATCACGTTAATACAAATGGATGGTCA ATATTAGATTTAAGTAAAAGATTTTATTGTATTAGAAACTTCCTAGTAACAAACTCTTATGCTATACCTGCTATATTTTT TTACAGGGTACAGAAGATGATGTTGTCAATTGGTTACATGGTAATGGACTTTGGAAAATGGCAAGGGAGTCGTATGACCC CTTGTGGATTAAAGGAGGTGGTCACTGCAACTTGGAGCTTTATCCCGATTACATCCGACATCTTTGCAAATTCATCCAAG AAATGGAGAGCATTACAACTGAAAAGCGCCTCAAAAAGCTTCGACAAAGTCAGGGTCCGCAGTCAAACTCAAGCTCTTGT TTCAGCTGTAGTTGCTGCAGAATGAAATGTTGTAGTAACAACTGCACTGGCTGCTCAAATTGCAGCTGCATAAACCCTGA ATGCTGCAATTGCAGCTGCATAAACCCTGAATGCTTCAATTGCAGCTGCATAAACTGTTCCTGCTCTCTCAAATGTACTC AATGCTGTTGTTTACCTAGCTGCATTAAGTGCTGTCACTTACCCAAGTTCTCTACTTGTTTTGGATCAAGCTGCTGCACA AAATGCTCAAGGCCTAGTTGTTGCTTCAAATGTTGCTGCAACTTGCGTTGTGCGAGACCAAGTTGCTGCTGCATGAGTTG TTTCTGTTGGCGATGTTGTGTGGGAAAACACAGTGGCAGAGATGAGAAACAAAGTGGCTAGTGGTTATTATATGGTTGTA TAGAGATGGCCAATCTTTTCTAACACCCTTATTGTGCAGAGGTGTAAAAACAAGAGGAAGTGGAGGATGACAATTGTAGG AGGAAGGTGATATGATCCAGTTTGCTCTATCTTTTCTGGTTCATCTGGATATTAATTCTTATGTTGTATCAGAAGATTTT ACTCATAACGTTGGTGTTTGAATTAACTTTTGATGCAGTTGGTGAATGACAATGTGTCTTCCCCATTGAATTTTTTTGCA GTATTCTTTGTCTTCATGCCTATTAGACATAGAACCATGACAAATGTTTTCTACTTTTCTATCATCTATTATGAGTCCTA ACTAGGGCTCTACTA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0337100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTTGCATGGTGTCTCAGCTAGCTGCAAAGTTTGCATTCTTCCCACCTTCTCCACCCACTTACCAGCTCAAGAAGCG TGACGACGGCAAGCTCACGGTGGTCTCGGCGGCGTCGCCGTCGGTTCCTATTCCTCACGCCGATGACAGCTCCTTGGATG TTCTGCTTGTTGATACCAAACATGGCAACAAGATTGTGGCGTTTTATCTGAAGAATCCTTATGCTCGTCTCACTCTGCTC TACTCTCATGGCAATGCTGCTGACCTTGGTCAACTCTATGATCTCTTTGTGCAACTCAAGGTCAATCTTAGAGTTAATCT CATGGGATATGACTACTCTGGATATGGGGCCTCTACTGGCAAGCCTAGTGAATCCAGCACATATGCTGACATAGAGGCTA TATATGAATGCCTTGAATCTGAATATGGAGTTGGCCAGGAAGACATAATCTTGTATGGGCAGTCAGTTGGAAGTGGGCCA ACGTTGCACTTGGCAGCTAAATTGCCAAGGTTGAGAGGCGTGGTTCTACACAGCGGCATTCTTTCTGGTCTTCGAGTGCT TTGTCATGTCAAGTTCTCATTTTGCTTTGACATTTATAAGAACATAAACAAAATAAAGAAAGTCAAGTGCCCTGTACTGG TAATACATGGTACAGAAGATGATGTTGTCAATTGGTTACATGGTAATGGACTTTGGAAAATGGCAAGGGAGTCGTATGAC CCCTTGTGGATTAAAGGAGGTGGTCACTGCAACTTGGAGCTTTATCCCGATTACATCCGACATCTTTGCAAATTCATCCA AGAAATGGAGAGCATTACAACTGAAAAGCGCCTCAAAAAGCTTCGACAAAGTCAGGGTCCGCAGTCAAACTCAAGCTCTT GTTTCAGCTGTAGTTGCTGCAGAATGAAATGTTGTAGTAACAACTGCACTGGCTGCTCAAATTGCAGCTGCATAAACCCT GAATGCTGCAATTGCAGCTGCATAAACCCTGAATGCTTCAATTGCAGCTGCATAAACTGTTCCTGCTCTCTCAAATGTAC TCAATGCTGTTGTTTACCTAGCTGCATTAAGTGCTGTCACTTACCCAAGTTCTCTACTTGTTTTGGATCAAGCTGCTGCA CAAAATGCTCAAGGCCTAGTTGTTGCTTCAAATGTTGCTGCAACTTGCGTTGTGCGAGACCAAGTTGCTGCTGCATGAGT TGTTTCTGTTGGCGATGTTGTGTGGGAAAACACAGTGGCAGAGATGAGAAACAAAGTGGCTAG
Download CDS Sequence

Protein sequence (LotjaGi2g1v0337100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGCMVSQLAAKFAFFPPSPPTYQLKKRDDGKLTVVSAASPSVPIPHADDSSLDVLLVDTKHGNKIVAFYLKNPYARLTLL YSHGNAADLGQLYDLFVQLKVNLRVNLMGYDYSGYGASTGKPSESSTYADIEAIYECLESEYGVGQEDIILYGQSVGSGP TLHLAAKLPRLRGVVLHSGILSGLRVLCHVKFSFCFDIYKNINKIKKVKCPVLVIHGTEDDVVNWLHGNGLWKMARESYD PLWIKGGGHCNLELYPDYIRHLCKFIQEMESITTEKRLKKLRQSQGPQSNSSSCFSCSCCRMKCCSNNCTGCSNCSCINP ECCNCSCINPECFNCSCINCSCSLKCTQCCCLPSCIKCCHLPKFSTCFGSSCCTKCSRPSCCFKCCCNLRCARPSCCCMS CFCWRCCVGKHSGRDEKQSG
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12277
1 298 298 3.9E-191 –
PANTHER
PTHR12277:SF139
1 298 298 3.9E-191 –
SUPERFAMILY
SSF53474
24 268 245 1.06E-36
IPR029058
Gene3D
G3DSA:3.40.50.1820
58 254 197 7.7E-28
IPR029058
Pfam
PF01738
124 227 104 2.4E-4
IPR002925
ProSitePatterns
PS60026
367 403 37 -
IPR012622

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005576
Cellular component Extracellular region The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
Subterm of
GO:0009405
Biological process Pathogenesis The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
Subterm of
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of
GO:0019870
Molecular function Potassium channel inhibitor activity Stops, prevents, or reduces the activity of a potassium channel.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0337100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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