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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0340000 |
| Transcript ID | LotjaGi2g1v0340000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR disease resistance protein; TAIR: AT3G07040.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q39214|RPM1_ARATH Disease resistance protein RPM1; TrEMBL-Plants: tr|V5UNU9|V5UNU9_CICAR CC-NBS-LRR disease resistance protein; Found in the gene: LotjaGi2g1v0340000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:81688437..81692433) extracted from Lotus japonicus Gifu genome v1.2.
GGTTTGTGTAAAATACTTACATAACAAAACATCTCTTGAATGCATGGCATGGTTTTAAGTCAGAGGTTTATGTGCTGGAA GTAAAGTACCTTCAAATAAATCACTGGTAATTGACCTTTTCCTTTGAGGCGGCTCTTAATAAGAGCACATTTCATAGAAT ATAATTAAGATACGTACCTTGAACAAGGTTTATATAAACACACACACACACACACCACATTATCATCATCAAGTCCTTGC AAGTTGCTACTATTCCTATCACAAGAAAAATAAAAACTCCCAGAAATCTCATCATCAAATTCTAGCAACTCTTTCTGTCC AGAGAAAAGAAAATAGATCCAATCCTAGCCAAGGCCCCAAAGAGGTGAAAAAACCAATGGCAGATAGTCCAGTGTCATTT TTATTGGACAAACTGACTTCATTGCTTCAAGAAGAAGTGAATTTGCAGAGAGGGGTCCGTGAAGATGTTCACTACATCAA AGATGAACTAGAACGCCACCAAGCTATCTTGATGGTGGCTGATGCACTTGAAGACAAGGACCCTGAACTCAAAACATGGG TTAAAAGGGTAAGAGATGTTGCTCATGACATGGAAGATGCTATAGATGAGTACAATCTTCGCCTTGTTGACCAACATGGA CAACAAGGCAATAACTCTCTTCACAAGATTTCTTTTGCCTTTAAGACCATGGGAGCAAGGCATAGAATTGCTTCAAACAT TCAAAGCATCAAATCCAAAGTGGAAGTTATCTCACAGGGACGACCGAACGTAAGCACAAGGTTGACAAGTCAAAGGTTCT TACCATCATCATCATCATCAAGGCTTGATAGCCAGGGTGATGCCCTTTTGCTAGAGGAAGCTGATTTGGTTGGAATTGAC AAACCAAAGAAGCATCTCAGTGATTTGCTTTTCAATGAAGAACAAGGTCGTGCTGTGATTCCCATTTATGGAATGGGAGG GTTGGGGAAAACAACACTTGCAAAACAAGTCTATGAAGACCCCAGAGTCAAGAAGCGTTTCAGGATGCATGCTTGGGTTA ATGTTTCTCAATCGTTTAAGCTAGAAGAGCTCCTGAAAGACCTTGTTCGCCAGCTTCATGAAGTGATTGGGAAACCAGCT TTCGAAGAAGTTGCACATATGAAGAGTGACAAGCTGAAAGAGTTGATCAAGAATTTGCTTCAAAGAAGCAGGTACATTCT AAGCTCTAACAGATGATTCTATTATTTTGCCTCACACGCTGCATGAGATGATCTCCTCCATTTATAATAGAATAATTCAT AACCATTGCATAACTATAAGGAAAATCTGGTGCTTTAAAGCTTCCACTATGCGCAAGGTCTAGGGAGGGACCAGACTCAC TTTATAGCTCTAATGTAGGCAAGCACTCTTACTTTACATTTTTTAGAGGTTTAGCTCAAATATGTGACCGCAAAGTCACA TGACAACAACTTTACCATTGCATAACTAGTACTCAACTAAAATACTAAATAAGCATAAAGCGAATGATAAATGCTAAGTG GTTACATAACAAAAGAATGTTAGCCCTTAACAAAACTAATGCCTCTTAATGACTAGTTATTACAACCCCTCATCTTTCTA ATGATGTACCCTTTTGTTTTTTAATTATTGCTAACTTAATTTCTAACAGGTACCTCATTGTGCTGGATGATGTCTGGCAT GTGAATGTCTGGGATGCTGTGAAACTCGCTTTGCCTAATAACAACAGCGGCAGCAGAGTGATGCTTACAACAAGGAAGAA AGACATAGCCTTGTATTCATGTGCTGAATTGGGTAAGGATTTCAGCCATGAATTCTTACCTGAACAAGAAGCATGGTCTC TTTTCTGCAGGAAGACATTTCAAGGTAACTCATGCCCTCCTTATCTAGAAGAAGTTTGCAGGAACATCTTGAAATTGTGT GGAGGGTTGCCACTTGCAATTGTAGCAATCAGTGGTGCTCTGGCTACAAGAAGCAGAACAAATATTGAAGAGTGGCAGAT AGTTTGCAGAAGCTTTGGTTCTGAAATTGAAGGCAATGATAAGCTTGAGGATATGAAGAAAGTGCTGTCCTTAAGCTTCA ATGAGTTACCTTACTATCTTAAATCATGTCTGTTGTACTTAAGCATCTTCCCACAATTTCATGCTATTGAGCACATGAGG CTGATTCGTTTGTGGATAGCTGAAGGTTTTGTCAATGGAGAAGATGGCAAGACAGTTGAAGAAGTTGCAGACAGTTACCT CAAGGAGCTTTTGAACAGAAGTTTGCTGCAAGTGGTAGCAAAAACCAGTGATGGCAGGGTGAAAACTTGTAGAATGCATG ATCTTCTGAGGGAGATTGTGAACTTGAAGTCAAAAGATCATAACTTTGCAACAATAGCCAAAGAACAAGACATGATATGG CCAGAGAGAGTTAGACGTCTCTCAGTCATTAACACAACAAACACATCACATCATGTGCAACAAAACAAAGCCAAATTCCA ACTTCGATCCCTGCTAATGTTTCCCTCATCAGATTCACTTGATCATTTTTCAATTCATGAGTTTTGCTCCACTGGTTACA AGCTCCTCAGGGTGCTAGACTTGCAGGATTCACCTTTGGAGATTTTCCCAGCTGAAGTTCTCACCCTTTGCCTTCTCAAG TTTCTAAGTTTGAAGAACACAAAGGTGAGAACCATTCCAGGTTCAATCAAGAAGCTGAAATACTTGGAGACACTAGATCT TAAACACTCTAATGTCACTGAATTGCCACCTGAAATTGTGGAGCTGCAAAGATTGCGCCATCTCCTCGTGTATCGCTACG AGATTGAATCCTATGCTCATTTCCACTCAAGGCATGGCTTCAAGTTGGTTGCCCCAATAGGAAAAATGCTATCTTTGCAG AAGCTGTGTTTTCTAGAGGTGGATCAAGGAAGCAATGACTTGATGGTTGAGCTGGGAAAACTCACTCAACTAAGGAGGCT GGGAATCAGAAAGATGAGAAAAGAACATGGTGCTGCATTGTGTTCATCCATTGAGAAAATGATCAATCTGAGATCACTCA ACATAACTGCAATTGAAGAGGATGAGGTAATTGACATCCATGACATTTCAAACCCTCCTCAGTATCTTCAGCAGCTGTAC TTGAGTGGAAGGTTAGAGAAGTTTCCCAAATGGATAAGTTCTCTTAAGAATTTGGTTAAAGTGTTTCTACGATGGAGCAG GTTAAAGGAGGATCCTCTTGAGTATCTTCAAGATTTGCCAAATCTAAGACACCTTGAGTTTCATCAAGTTTATGTTGGTG AGACATTGCATTTCAAAGCCCCGGGGTTTCCAAGCTTGAAAGTGTTAGGCCTTGATGATTTAGATGCAGTTAAATCTGTG ATAATTCAAGAGGGAGCAATGCCTGGTCTTAAAAATTTGATTATACAACGTTGTGGCTCATTCAAGCAGGTACCTTTGGG CATTGAACACTTGACTAAACTGAAAAAGATTGAGTTTTTTAACATGCCTGAAGAATTGATTATGCCACTGAGACCAAATG GAGGAGAAGATTATTGGAGAGTGCAGCATGTTCCTGCGGTTTATACCACATATTGGAGGGATGGTGGTTGGGATGTTTAC TCATTAGAGACTTTTGGGGAGAGGGAGAGTGATTCCAATGGTGGCAATGCAATGAGAAGTCTTGAGCTTCCTACTTTTTG GAAGGTTTAAATCTGAGATTGATGTGATTTTTTTCATGGTGATGGCAATTTTTTGTTTTGCATCACAGTGCATGCTTAAG TGATGGCAAGTTTTTGTTTTCCATCAATTAGTATGCACAAGAGACACTAGTTTTGTTATTCATGTTTAACATGATATTTA ATTTCATTTCAAATTACATTCTCCTTTATAATTCTTTGTATCTTATATGGAATCAAATTTAGAGGGTTTAAGATGATATC AGTGTCATCTATGACATCAGTGTCATCTTTACCTGATTTGCAAGTTGTCGATTATTTTAAATTTTATTCTAATATCG
CDS sequence (LotjaGi2g1v0340000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGATAGTCCAGTGTCATTTTTATTGGACAAACTGACTTCATTGCTTCAAGAAGAAGTGAATTTGCAGAGAGGGGT CCGTGAAGATGTTCACTACATCAAAGATGAACTAGAACGCCACCAAGCTATCTTGATGGTGGCTGATGCACTTGAAGACA AGGACCCTGAACTCAAAACATGGGTTAAAAGGGTAAGAGATGTTGCTCATGACATGGAAGATGCTATAGATGAGTACAAT CTTCGCCTTGTTGACCAACATGGACAACAAGGCAATAACTCTCTTCACAAGATTTCTTTTGCCTTTAAGACCATGGGAGC AAGGCATAGAATTGCTTCAAACATTCAAAGCATCAAATCCAAAGTGGAAGTTATCTCACAGGGACGACCGAACGTAAGCA CAAGGTTGACAAGTCAAAGGTTCTTACCATCATCATCATCATCAAGGCTTGATAGCCAGGGTGATGCCCTTTTGCTAGAG GAAGCTGATTTGGTTGGAATTGACAAACCAAAGAAGCATCTCAGTGATTTGCTTTTCAATGAAGAACAAGGTCGTGCTGT GATTCCCATTTATGGAATGGGAGGGTTGGGGAAAACAACACTTGCAAAACAAGTCTATGAAGACCCCAGAGTCAAGAAGC GTTTCAGGATGCATGCTTGGGTTAATGTTTCTCAATCGTTTAAGCTAGAAGAGCTCCTGAAAGACCTTGTTCGCCAGCTT CATGAAGTGATTGGGAAACCAGCTTTCGAAGAAGTTGCACATATGAAGAGTGACAAGCTGAAAGAGTTGATCAAGAATTT GCTTCAAAGAAGCAGGTACCTCATTGTGCTGGATGATGTCTGGCATGTGAATGTCTGGGATGCTGTGAAACTCGCTTTGC CTAATAACAACAGCGGCAGCAGAGTGATGCTTACAACAAGGAAGAAAGACATAGCCTTGTATTCATGTGCTGAATTGGGT AAGGATTTCAGCCATGAATTCTTACCTGAACAAGAAGCATGGTCTCTTTTCTGCAGGAAGACATTTCAAGGTAACTCATG CCCTCCTTATCTAGAAGAAGTTTGCAGGAACATCTTGAAATTGTGTGGAGGGTTGCCACTTGCAATTGTAGCAATCAGTG GTGCTCTGGCTACAAGAAGCAGAACAAATATTGAAGAGTGGCAGATAGTTTGCAGAAGCTTTGGTTCTGAAATTGAAGGC AATGATAAGCTTGAGGATATGAAGAAAGTGCTGTCCTTAAGCTTCAATGAGTTACCTTACTATCTTAAATCATGTCTGTT GTACTTAAGCATCTTCCCACAATTTCATGCTATTGAGCACATGAGGCTGATTCGTTTGTGGATAGCTGAAGGTTTTGTCA ATGGAGAAGATGGCAAGACAGTTGAAGAAGTTGCAGACAGTTACCTCAAGGAGCTTTTGAACAGAAGTTTGCTGCAAGTG GTAGCAAAAACCAGTGATGGCAGGGTGAAAACTTGTAGAATGCATGATCTTCTGAGGGAGATTGTGAACTTGAAGTCAAA AGATCATAACTTTGCAACAATAGCCAAAGAACAAGACATGATATGGCCAGAGAGAGTTAGACGTCTCTCAGTCATTAACA CAACAAACACATCACATCATGTGCAACAAAACAAAGCCAAATTCCAACTTCGATCCCTGCTAATGTTTCCCTCATCAGAT TCACTTGATCATTTTTCAATTCATGAGTTTTGCTCCACTGGTTACAAGCTCCTCAGGGTGCTAGACTTGCAGGATTCACC TTTGGAGATTTTCCCAGCTGAAGTTCTCACCCTTTGCCTTCTCAAGTTTCTAAGTTTGAAGAACACAAAGGTGAGAACCA TTCCAGGTTCAATCAAGAAGCTGAAATACTTGGAGACACTAGATCTTAAACACTCTAATGTCACTGAATTGCCACCTGAA ATTGTGGAGCTGCAAAGATTGCGCCATCTCCTCGTGTATCGCTACGAGATTGAATCCTATGCTCATTTCCACTCAAGGCA TGGCTTCAAGTTGGTTGCCCCAATAGGAAAAATGCTATCTTTGCAGAAGCTGTGTTTTCTAGAGGTGGATCAAGGAAGCA ATGACTTGATGGTTGAGCTGGGAAAACTCACTCAACTAAGGAGGCTGGGAATCAGAAAGATGAGAAAAGAACATGGTGCT GCATTGTGTTCATCCATTGAGAAAATGATCAATCTGAGATCACTCAACATAACTGCAATTGAAGAGGATGAGGTAATTGA CATCCATGACATTTCAAACCCTCCTCAGTATCTTCAGCAGCTGTACTTGAGTGGAAGGTTAGAGAAGTTTCCCAAATGGA TAAGTTCTCTTAAGAATTTGGTTAAAGTGTTTCTACGATGGAGCAGGTTAAAGGAGGATCCTCTTGAGTATCTTCAAGAT TTGCCAAATCTAAGACACCTTGAGTTTCATCAAGTTTATGTTGGTGAGACATTGCATTTCAAAGCCCCGGGGTTTCCAAG CTTGAAAGTGTTAGGCCTTGATGATTTAGATGCAGTTAAATCTGTGATAATTCAAGAGGGAGCAATGCCTGGTCTTAAAA ATTTGATTATACAACGTTGTGGCTCATTCAAGCAGGTACCTTTGGGCATTGAACACTTGACTAAACTGAAAAAGATTGAG TTTTTTAACATGCCTGAAGAATTGATTATGCCACTGAGACCAAATGGAGGAGAAGATTATTGGAGAGTGCAGCATGTTCC TGCGGTTTATACCACATATTGGAGGGATGGTGGTTGGGATGTTTACTCATTAGAGACTTTTGGGGAGAGGGAGAGTGATT CCAATGGTGGCAATGCAATGAGAAGTCTTGAGCTTCCTACTTTTTGGAAGGTTTAA
Protein sequence (LotjaGi2g1v0340000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADSPVSFLLDKLTSLLQEEVNLQRGVREDVHYIKDELERHQAILMVADALEDKDPELKTWVKRVRDVAHDMEDAIDEYN LRLVDQHGQQGNNSLHKISFAFKTMGARHRIASNIQSIKSKVEVISQGRPNVSTRLTSQRFLPSSSSSRLDSQGDALLLE EADLVGIDKPKKHLSDLLFNEEQGRAVIPIYGMGGLGKTTLAKQVYEDPRVKKRFRMHAWVNVSQSFKLEELLKDLVRQL HEVIGKPAFEEVAHMKSDKLKELIKNLLQRSRYLIVLDDVWHVNVWDAVKLALPNNNSGSRVMLTTRKKDIALYSCAELG KDFSHEFLPEQEAWSLFCRKTFQGNSCPPYLEEVCRNILKLCGGLPLAIVAISGALATRSRTNIEEWQIVCRSFGSEIEG NDKLEDMKKVLSLSFNELPYYLKSCLLYLSIFPQFHAIEHMRLIRLWIAEGFVNGEDGKTVEEVADSYLKELLNRSLLQV VAKTSDGRVKTCRMHDLLREIVNLKSKDHNFATIAKEQDMIWPERVRRLSVINTTNTSHHVQQNKAKFQLRSLLMFPSSD SLDHFSIHEFCSTGYKLLRVLDLQDSPLEIFPAEVLTLCLLKFLSLKNTKVRTIPGSIKKLKYLETLDLKHSNVTELPPE IVELQRLRHLLVYRYEIESYAHFHSRHGFKLVAPIGKMLSLQKLCFLEVDQGSNDLMVELGKLTQLRRLGIRKMRKEHGA ALCSSIEKMINLRSLNITAIEEDEVIDIHDISNPPQYLQQLYLSGRLEKFPKWISSLKNLVKVFLRWSRLKEDPLEYLQD LPNLRHLEFHQVYVGETLHFKAPGFPSLKVLGLDDLDAVKSVIIQEGAMPGLKNLIIQRCGSFKQVPLGIEHLTKLKKIE FFNMPEELIMPLRPNGGEDYWRVQHVPAVYTTYWRDGGWDVYSLETFGERESDSNGGNAMRSLELPTFWKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 2 | 126 | 125 | 5.12453E-39 | ||
| Pfam | 6 | 93 | 88 | 1.2E-24 | ||
| PANTHER | 10 | 884 | 875 | 2.1E-212 | – | |
| PANTHER | 10 | 884 | 875 | 2.1E-212 | – | |
| Gene3D | 157 | 317 | 161 | 3.8E-40 | – | |
| SUPERFAMILY | 159 | 429 | 271 | 2.29E-65 | ||
| Pfam | 170 | 416 | 247 | 5.9E-59 | ||
| PRINTS | 187 | 202 | 16 | 3.3E-19 | – | |
| PRINTS | 267 | 281 | 15 | 3.3E-19 | – | |
| PRINTS | 362 | 376 | 15 | 3.3E-19 | – | |
| Gene3D | 492 | 667 | 176 | 1.2E-12 | ||
| SUPERFAMILY | 493 | 886 | 394 | 2.04E-40 | – | |
| PRINTS | 619 | 635 | 17 | 3.3E-19 | – | |
| Gene3D | 693 | 889 | 197 | 2.5E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0340000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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