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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0345900 |
| Transcript ID | LotjaGi2g1v0345900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nodulin-like / Major Facilitator Superfamily protein; TAIR: AT5G45275.1 Major facilitator superfamily protein; Swiss-Prot: sp|F4I9E1|NFD4_ARATH Protein NUCLEAR FUSION DEFECTIVE 4; TrEMBL-Plants: tr|G7K5G1|G7K5G1_MEDTR Nodulin-like/MFS transporter; Found in the gene: LotjaGi2g1v0345900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:82265822..82272670) extracted from Lotus japonicus Gifu genome v1.2.
TTGGCTTTTGTTTACCAAGAAAAGGAAAGTATCAAGAGAGAACAAGATGAGAAAAAATAAAATTAAATACTGTAAAGGAT AAAATTTTATTGATGCTACTTAATTATTTAAATACACTTAAAAATAACAACATAGAATATAAACGTCCATAACTTTAGGA ACTGACTCATACTTTTTTTTTTGAAGGAACTCATTTTTTTTTAGCAGAGGAACTCATACTCAATAATCATAATAAATAGA AAATATTTATCTCTTAACAAACTAAAATCTAATATCTTAATAAATAAAAAAACTCAAACAGCTACTACCGAAGCGCTTAT GGTCTTAAGCGACCTTAAGGGCTTATGACATAATAACTTATTCATAAGTTATTTTAAAAAATTTATAAGCTATATATAAA CATAAACTATTTTTCATAAGTTATCCTGAATAGCTTATGAAAATAAGCTCAAAACAACTTATGGTAAGTCATAAGCTGTT TGCATAAGCTCTCATAAATACTGACATAAACACTTATGCTATCAAATAAGCTCTTTCAAACGGGTTCATAATCTAACTGA CTGAGTGTTGCTATAATTTTTTGTAACATTTGGGGAACGGTTGTTTTATAAGGATCCAAGCCCAAGCACTCCCTGATGTA CGTGGACACGTAGAGCCATTCATTCCCAGTCAGACATTTACACAAACACATCAACTGCAGCAACTCCCTCTCTCGTCGAA AACAGTGAGTGATGGCGGGGCAGTCACGGAAGTGGATGATACTGGTGGCGACGATATGGATTCAGGCATTCACCGGCACC AATTTCGATTTCTCCGAGTACTCCTCCGCCATGAAATCTGTCCTCAACATTTCACAAGTTCAACTCAATTACCTCGCCAC CGCCAACGATATGGGCAAATTCTTCGGCTGGTCCTCCGGTCTCGCTTTCTCCTACCTTCCCCTCACTGTCGTTATGTTCA TTGCTGCTTCCATGGGAGTCATTGGTTATGGGCTTCAGTGGCTTGTCATTGAGAACATCATCACTTTGCCTTATTTTCCG GTATGTTCATCACTTTCTATTCTCATTCATGGTTTATTATCTATTTTCTAAAATATTTAGTCCAGAGTTCGATCTTTAAA CCGACTTCAGTCATTCGTTGGGCGGCGCTTATTAAATAACATTTGTTGAGAGATGCATATTCATTTAATATGATAAGTTT TAGGGGATTAGTCCTGTGGATATCCTGGAAAACCAAAACAAAATTTTGCTTTGAATTTATGTTAATTTCTATTTAAGTAA TGTTTAACTTCAATAGTCAAAGGTGTTTTCTGCAGTTAAGAAACAATTTGCCATTTTTAGCCATTGCCTTGAATGATGGG TCTTGCTTGATATATGGTGGATGGAATGGCATGCCTTTTTTATTTCATTATCAAAGCAAAACGCTCTCTAATGTGTTGAG GATTAAAAATGTTTCTAAAATATTTTGCAAGTAAAATTACATATTAAATTTTATATAATTTTTTCATTAGTACTCCATTA ATAAAGAATAGTATATAGTTAAATTATTTAGTGAGCTCAGTATGAATTCGACTTTAAAAAGATGTGAGACATTTAATAAT ATTTTATTAATTTGTTTATATTCGAAGAATATACTACTCGTGATATTTATTCTTATGATCTTGGATATATGGTCTATGTT GTTTGAGCAAGAGCTACCATCAATTTTCTCTGTATCAGATTCTGAATCAGAATAGTTCCCCTCTCACGTCGGTCAATTAT TCAAAAACGACCATTTTAGCACTGGCTAGAAAACAAAGGAAAATTTTAAAATATACGATTTCCCTCTTCTGTTGTTTTTG TTTTATTTTGCAGTTTTGAGTGGTCGACATATTTTCTTGACAAGAGTAAAATTATAAGGCGATAACTTCCTTGATGGATT TGGATCCTTTATATCATCTTACACGTCCTTTTTCATTTATTTCCTCAAAATTATTTTGAACCGTTATATGTGGTCCCAAA CTCCAAATTGTGGACCCTGAACCCAACTAACATGCTTATTATTCTAGAATCTGCTAGATCACTAGGGAGCAATGTCAAGT TTGATAGAATCATCAATTCAACAAGTATGTTACAATAATGATAATTGACACATCACATGCATATTAATTGCAGTATTATT TATGGTGGTATAAAATGTCACGGGTGTTGAATAGTGTAAACATTGTGGATGTCTCCACACATCATTAATGTAATATAGAC CATGGATGAGTAAGTATGAACATATTTTCATTCCAATCCATAAGATGATTTAAGCAATTTAATCATGTGATTATCAAATA AGCTCTTGACTAGTTTTCACTATGTATCTGGCAGGTCTTTCTTCTATGTCTGTTGAGTGGCTGCAGCATTTGTTGGTTCA ACACAGTATGTTTTGTTCTCTGCATCAAGAACTTCCCAGTTAACAGACCTCTAGCACTATCACTAACTGTGAGCTTCAAT GGGGTAAGTGCAGCACTCTACACGCTCGCTGCCAATTCAATCAACCCCTCATCCGATAAACTGTACCTTCTTTTGAATGC CGTTCTCCCCATTCTCACTTCCATTGCAGCATTAGGCCCAATTCTTCGCCAGCCACCCTTAGACTCTCTTTCGCCAAATG CCGCTCGCAAGAACTCAGTGATATTTCTCATACTGAACTTCCTAGCCGTTTTCACTGGCCTTTACCTCCTCCTCTTTGGC TCATCAACTTCCGATGAAACCAAAGCGCGGTTCTACTTTGGTGGAGCCATTTTGTTACTCATTTTGCCTCTTTTCATTCC TGAAATCATATACGCTCGAGATTGGTTTCACGATGCTCTTCATTCTAGCTTTCGGGTGGAAAGCTCTGGCAGCTTCATTC TTGTTCATGTCAATGATCTGGAGCTTCACAAAGAACTCCTTGCAAATGAAAACAGTGCTCTAAGCAATGGAGATGATCAC AGCCTTTTGAGTGAGAATGGATCAATACTTGATAGTCAGAGGGAGAGAAATAGTGTTGTGAGTCGTGAGAAGATTCTTGG TAAGGATCAGTTGACAATGCTGGGAGAAGAGCACTCTGCTTCAGTGCTTGTCAGAAGGTTGGACTTTTGGCTTTACTACG TTGCATACTTCTGTGGAGGCACAATTGGTCTTGTCTACAGCAACAATCTGGGACAGATAGCTCAATCTATGGGCTTGAGT TCAAAAACATCTACCCTTGTCACATTATACTCATCCTTCTCCTTCTTTGGCCGCTTGCTTTCTGCCACACCAGACTATAT TCGAAAGTAAGTATTCTCACCATTTTTCTCTACTAGATCATGTTTTTGGAGCTTAAGCCTACTGATAGAGGAATATGGCT TTTCCTTTTACTCTCTTGATTAGGAATTAAATGGTATGCCATTAGGCATGATTACTAATACACTATGGTCAATTAATTTG ATCTATCTAGCAGTATGAATGTAGTATTCCTTGTATTACTCTTATCAATCTGATCATGATAACAACAATAAGAGGTGTGA GAAATTTGAAATGATGTCAATTTTCAATGTGAGGAATGAATCAAAAAGAAATGCTACAATCACTCATTTGACACCCTCTT TCCAATACTCTTTTCTTAATTGTGTCAAAGTGAGTTGGTTGCACCACACAATGAATAGAAATAAAACTCCTATGCTTACT GTTATTAGAGAGACCAACACTATCCCCAAATGTCCATGATTACAACACTATCTCCCAAGCAATATATTGTTCAATCTTGT GCATATTGCAAAGAACAATAATCACACAAATAAAATGGAAGACATGTGTGATCATCAATCTTGTGTAATTGGGTTAAAAT ATGATAACTATTGAAGAGTCTATTAAAACATAGACAATTGATGACCAGAAAAAATGCATAATTATAACATTGAGCCTCAG AAACAGCCAGAAAGTCACATCAATTGATTCAGACGGTAATTCCAATTCAATTAAGTCATCATTGGCATCAAAAGACAAAA GATTGATAATAATTTTGATTTGAGAAAATTGAAATGTAATCGCATAAATCGGCTCCACAGATCATGGTATATATGAGATC CGCAGGTTCCTCTATCAGGATGCGAAACAAATGAATATCACTCTTGTTTTTGGTCCAATCATAGCATCAATGGTCACCGC TATATAGCTACCAGCGACGTGGCATCGGACCCAATCACAGATAAAAAATAAATCAAAATTCAATTTAAATTAATAGAAAA CGAAACCCTCAGAGACCCGTTCCAAATCACGCACAGCTCCGCCGCAAAGAAAATCCTCGACCGGTAACAGTTATGAATTG GTACCGGTGGATGAGAGCAGTTCTTTGCATCGGAGCTGTTGTTTAGAGTGTCATACGGCACTTCCTATCAATTTTTGGGA GATCCTCCTCATAGGGAATCTTCATGTTTCATAAATCTAGACACGACAAAGAAAAGTAGAATTTAAAAGAACAATTACAA CACAGCAGCTACTAACAAACGAGTGGAGAAAACAGAGACACCGTAACCACTGTAGCCACCGATGAGTCGTGAATGAATGA GTAATTTTCTTGTGGATGTTGTTTTATAGGGTGAGGCATGTTCAGCGATCATGGGCTGTTAGGGTTTAGGGGATTAGGTC TTGCCGTCAAGTTCTGCTAGTCATCGAATATGTTTTTTTTTTTCGACAAGGAATATGTTTTCTGAAACGGCGTAAACAAA GATGTAAATTCTGTTTTTGGGCCTACAATGTGAGCCCGAACTTTGTCTTAGCCCAAGTACATACATAAGATGAGGCCTTT TAGGATAATTGTTTGTCATTGACAAAAAAAAAAGGGATAATTGTTTGTCCACACCTCATATTTGAGGTGGAAAGAGGTGG AGGAGGAGAGAGATATAAAAAAAAAGTAAGAGAGAGAAAGTATAAGATGTGATAGATGATAAGAGGAGAGAGATATAAAT AAAAATATGTGAAAATGAAGTGTATAAAATATGAGGTGTGCATATATCATTGTTGGGCCTTTTAACAACTGCACATGGCA ATTTGAAAGAAGAAAAAAAAAAGTCTGCAATCCCCTAAATTCACGCAGTTAACAAATCTTAATCGTTTGATCTTGATCAG ACCACTTAAATCCTAAGATATTTCTACCGTATGATTTTGGTAAAAAATATCAGTGTTTTATCTTTTATAGGCGAATGTTA GTCGTTAATTGTAAGTAAATTACTTCATTCACCAGGGTTTGAACTTTGGTCTTTTACCCTTCAATACTCTTCATTCCCTT AGCTCAGTGAGTCTGATCTTGATCCTATGACCCAAATTTCGTGAATACATGATTGTTGGAATGTCTCAAATTCCATAGAA TGTTTCATCTTTCATTCAGTTGAGTAGATAGTGAAAAGAGAGAAATTTATTTTTATGCAAAATGACATTTTGATCTTAAA AATATAAATAAGTATGTTAATGATAGAGAATAAAATAAGAAAATGAGTATAATTAACAAACCCACTCTCACTTCATTTCT CTTCAAAACAGGGGTGACCTAAAAAATGTGAGGGTCCAACCACTTTTATGAGGTGCTGGCCTCTATCTTGCCCTTGTGAT GCTAACAAACAAAGCATTTGTGATGCTCACTCACTCCGTTGAACTAACTAACCATAAAAATGTATTGGCTAGTTAGTTAC AATTACAACATCAACTTAATAGGTCCAATTCCTATCAATGAATAGAGATTGAGATAGGAAAAAGGGACATTGAATCTTAA TCCTAAGCTAATCTATCTAGTGAGCAAAGGCTTTAGTTGCTGATTGATAAGTGAATCTTGTAAAATAAAGTTGTGGAATT TTGACGTTTGTTTTTTTCTCTGCAATGCAGTAAGTTCTACTTTGCAAGGACTGGATGGCTAACAATTGCACTTATACCGA CCCCAATTGCGTTGATCTTGCTTGCTGCTTCAGAGAGTGCTGCAGCACTCCATGCAGGCACTGCACTGATTGGTTTGAGT TCCGGTTTTATATTCGCGGCTGCTGTGGCAATTACATCTGAGCTGTTTGGGCCAAACAGTGTGAGCGTCAATCACAACAT TCTCATAACAAACATCCCGATCGGGTCCCTTCTCTACGGTTTTCTAGCTGCGGTAGTTTATGATGCCAATGCTAACTCAT CATCAGCAACTGGAACATTAATGTCTGACTCATCAGTGTGCATGGGAAGGCAGTGCTACTTTTGGACATTTGTGTGGTGG GGAGGCATATCTGTCCTGGGACTAGCTTCTAGTGTGCTCTTATTCTTAAGAACCAAGCTTGCATATGATCGTTTTGAGAG ACACCGGATTTCAGCACAATCAACTGTGTCTTAACTGCAGGGACTTGCAGAGTGAAGATGATATAATGGTTGATACTTGA TAGCAGAAGCTTGATTTGGAGGCAAAGCTAATGCAATGGTGAATTTTGATGAGCATATATATTCAGGATCTAGACTCAGA GGCCAAAGGCTTGAGGATTTCATTTTTCTCTCACAATTCACCAAACATTTAATTAGAAAAGGACAGAGCTTCGGACCTCA GTGCAGTCTGAGGAGGAATGTGTCAATGATGTCAGATCTTCATGAAGTGCATGTTCGGAATACAAAATAAAAACTGAGAG AAGTTGCTTCGGTCCACCATGATTTTACCTCACCGTAATTTTCTAACGTGTATCCAAACATGCATGAGTTGTGTCTGCAA CCATGATTTGAGGATTTTTTTGTACAAGACTTGAGGATAAATGTACACTGCTTTGCTCAAGGTTTTACACGTTATAATAA GATTACGATTAGTTTATATTTCATTCCATAATTACTTGAGTAACCAAGT
CDS sequence (LotjaGi2g1v0345900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGGGCAGTCACGGAAGTGGATGATACTGGTGGCGACGATATGGATTCAGGCATTCACCGGCACCAATTTCGATTT CTCCGAGTACTCCTCCGCCATGAAATCTGTCCTCAACATTTCACAAGTTCAACTCAATTACCTCGCCACCGCCAACGATA TGGGCAAATTCTTCGGCTGGTCCTCCGGTCTCGCTTTCTCCTACCTTCCCCTCACTGTCGTTATGTTCATTGCTGCTTCC ATGGGAGTCATTGGTTATGGGCTTCAGTGGCTTGTCATTGAGAACATCATCACTTTGCCTTATTTTCCGGTCTTTCTTCT ATGTCTGTTGAGTGGCTGCAGCATTTGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATCAAGAACTTCCCAGTTAACA GACCTCTAGCACTATCACTAACTGTGAGCTTCAATGGGGTAAGTGCAGCACTCTACACGCTCGCTGCCAATTCAATCAAC CCCTCATCCGATAAACTGTACCTTCTTTTGAATGCCGTTCTCCCCATTCTCACTTCCATTGCAGCATTAGGCCCAATTCT TCGCCAGCCACCCTTAGACTCTCTTTCGCCAAATGCCGCTCGCAAGAACTCAGTGATATTTCTCATACTGAACTTCCTAG CCGTTTTCACTGGCCTTTACCTCCTCCTCTTTGGCTCATCAACTTCCGATGAAACCAAAGCGCGGTTCTACTTTGGTGGA GCCATTTTGTTACTCATTTTGCCTCTTTTCATTCCTGAAATCATATACGCTCGAGATTGGTTTCACGATGCTCTTCATTC TAGCTTTCGGGTGGAAAGCTCTGGCAGCTTCATTCTTGTTCATGTCAATGATCTGGAGCTTCACAAAGAACTCCTTGCAA ATGAAAACAGTGCTCTAAGCAATGGAGATGATCACAGCCTTTTGAGTGAGAATGGATCAATACTTGATAGTCAGAGGGAG AGAAATAGTGTTGTGAGTCGTGAGAAGATTCTTGGTAAGGATCAGTTGACAATGCTGGGAGAAGAGCACTCTGCTTCAGT GCTTGTCAGAAGGTTGGACTTTTGGCTTTACTACGTTGCATACTTCTGTGGAGGCACAATTGGTCTTGTCTACAGCAACA ATCTGGGACAGATAGCTCAATCTATGGGCTTGAGTTCAAAAACATCTACCCTTGTCACATTATACTCATCCTTCTCCTTC TTTGGCCGCTTGCTTTCTGCCACACCAGACTATATTCGAAATAAGTTCTACTTTGCAAGGACTGGATGGCTAACAATTGC ACTTATACCGACCCCAATTGCGTTGATCTTGCTTGCTGCTTCAGAGAGTGCTGCAGCACTCCATGCAGGCACTGCACTGA TTGGTTTGAGTTCCGGTTTTATATTCGCGGCTGCTGTGGCAATTACATCTGAGCTGTTTGGGCCAAACAGTGTGAGCGTC AATCACAACATTCTCATAACAAACATCCCGATCGGGTCCCTTCTCTACGGTTTTCTAGCTGCGGTAGTTTATGATGCCAA TGCTAACTCATCATCAGCAACTGGAACATTAATGTCTGACTCATCAGTGTGCATGGGAAGGCAGTGCTACTTTTGGACAT TTGTGTGGTGGGGAGGCATATCTGTCCTGGGACTAGCTTCTAGTGTGCTCTTATTCTTAAGAACCAAGCTTGCATATGAT CGTTTTGAGAGACACCGGATTTCAGCACAATCAACTGTGTCTTAA
Protein sequence (LotjaGi2g1v0345900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGQSRKWMILVATIWIQAFTGTNFDFSEYSSAMKSVLNISQVQLNYLATANDMGKFFGWSSGLAFSYLPLTVVMFIAAS MGVIGYGLQWLVIENIITLPYFPVFLLCLLSGCSICWFNTVCFVLCIKNFPVNRPLALSLTVSFNGVSAALYTLAANSIN PSSDKLYLLLNAVLPILTSIAALGPILRQPPLDSLSPNAARKNSVIFLILNFLAVFTGLYLLLFGSSTSDETKARFYFGG AILLLILPLFIPEIIYARDWFHDALHSSFRVESSGSFILVHVNDLELHKELLANENSALSNGDDHSLLSENGSILDSQRE RNSVVSREKILGKDQLTMLGEEHSASVLVRRLDFWLYYVAYFCGGTIGLVYSNNLGQIAQSMGLSSKTSTLVTLYSSFSF FGRLLSATPDYIRNKFYFARTGWLTIALIPTPIALILLAASESAAALHAGTALIGLSSGFIFAAAVAITSELFGPNSVSV NHNILITNIPIGSLLYGFLAAVVYDANANSSSATGTLMSDSSVCMGRQCYFWTFVWWGGISVLGLASSVLLFLRTKLAYD RFERHRISAQSTVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| PANTHER | 1 | 573 | 573 | 0.0 | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| PANTHER | 1 | 573 | 573 | 0.0 | – | |
| SUPERFAMILY | 6 | 556 | 551 | 2.35E-14 | ||
| Pfam | 7 | 252 | 246 | 2.8E-81 | ||
| CDD | 7 | 545 | 539 | 1.90727E-76 | – | |
| Phobius | 10 | 17 | 8 | - | – | |
| Phobius | 18 | 21 | 4 | - | – | |
| Phobius | 22 | 67 | 46 | - | – | |
| TMHMM | 64 | 86 | 23 | - | – | |
| Phobius | 68 | 92 | 25 | - | – | |
| Phobius | 93 | 103 | 11 | - | – | |
| TMHMM | 96 | 118 | 23 | - | – | |
| Phobius | 104 | 130 | 27 | - | – | |
| Phobius | 131 | 135 | 5 | - | – | |
| Phobius | 136 | 154 | 19 | - | – | |
| Phobius | 155 | 165 | 11 | - | – | |
| Phobius | 166 | 186 | 21 | - | – | |
| TMHMM | 166 | 188 | 23 | - | – | |
| Phobius | 187 | 205 | 19 | - | – | |
| TMHMM | 203 | 225 | 23 | - | – | |
| Phobius | 206 | 224 | 19 | - | – | |
| Phobius | 225 | 235 | 11 | - | – | |
| TMHMM | 234 | 256 | 23 | - | – | |
| Phobius | 236 | 257 | 22 | - | – | |
| Phobius | 258 | 353 | 96 | - | – | |
| Gene3D | 317 | 571 | 255 | 2.0E-8 | – | |
| Phobius | 354 | 372 | 19 | - | – | |
| TMHMM | 354 | 376 | 23 | - | – | |
| Phobius | 373 | 420 | 48 | - | – | |
| TMHMM | 416 | 438 | 23 | - | – | |
| Phobius | 421 | 440 | 20 | - | – | |
| Phobius | 441 | 451 | 11 | - | – | |
| Phobius | 452 | 473 | 22 | - | – | |
| TMHMM | 453 | 475 | 23 | - | – | |
| Phobius | 474 | 484 | 11 | - | – | |
| TMHMM | 482 | 504 | 23 | - | – | |
| Phobius | 485 | 504 | 20 | - | – | |
| Phobius | 505 | 529 | 25 | - | – | |
| TMHMM | 530 | 552 | 23 | - | – | |
| Phobius | 530 | 553 | 24 | - | – | |
| Phobius | 554 | 574 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0345900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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