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LotjaGi2g1v0347000.1

Overview

Field Value
Gene ID LotjaGi2g1v0347000
Transcript ID LotjaGi2g1v0347000.1
Lotus japonicus genome version Gifu v1.2
Description Receptor-kinase, putative; TAIR: AT3G47090.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q1MX30|XA21_ORYSI Receptor kinase-like protein Xa21; TrEMBL-Plants: tr|G7K5D3|G7K5D3_MEDTR LRR receptor-like kinase family protein; Found in the gene: LotjaGi2g1v0347000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:82367516..82373304) extracted from Lotus japonicus Gifu genome v1.2.

CCGAACCAATCCGATCCAATCTATAGCGGTTTGGATTGGATTGGATTATTCGGTTTTTGTTTCACTTTTTTATATTTTGG AATTGTGTTGTATAAATTTTAAAAATATATAATATATGATACATAATTTATAACATTCATAAATTATAACATAGTAACAA ATTTTTAAATTATGATTATAATTGTTTACTTTGATGCATGTATATAGTTCAAATAATTACTTGAACTTTTTTTATTAAAA CGTAATTTTATAAATAAGCATGTGTGATATAATCAATATATAAACAATAAATATGTACTATGTAAGTGTAAATGGAATGA TATATGTATAACTAAAAATATACATATTTGTGAATGTTCGGTTTGGATTGGATTGGTTCGGTTTTGGAAATCAAATCCGA AATCCGATCCGATCCAATAAATAATTTCGGTTTTTTCAATTTTCAATCCGTTCGGTTTTCGGTTTGATTGGATTTCGGTT TTTTTGGATCGGTTTGTCGGTTTTGTTTGGATTGGTTCGGTTATGAACACCCCTAGGAACCATTTCATCGGACAAGTTCC AAGTCTAGGAAAGTTACAAGATCTTCAGTTGCTAAATTTGGGTGCCAACAATCTAGGTACCAATTCAACTAAAGATTTGG TTTTCTTGAAATCACTAACAAATTGTAGTGAGTTGCAGCGTCTATCTATATCCGACAACAATTTTGGGGGTCCTTTGCCT AGTTCAGTGGGCAATTTATCCACCCAACTCAGTCAACTATATCTTGGGGGTAATGACATATCAGGAAAAATTCCTATGGA ATTAGGAAATCTAATTAATCTACTAGTTCTGACCATGGAAAATAACCACTTTGAAGGGACTATTCCGTTTGCTTTTGGGA AGTTTCAGAAGATGCAAGGGTTGAAATTGGGTCGAAACAAGGTGTCTGGAGATATACCAAACTCCATTGGAAACCTCACT CAACTGTTTCATTTGGGTTTAGGACAAAATAAGTTAGAAGGTACTATTCCTCGATGTATAGGAAATTGTCAAAAGTTACA ATACCTAGACCTGTCAGGAAACAACCTTAAAGGAAACATACCCGTTGAGGTTTTTAGTCTTTCCTCATTAACAAACTTAT TGGACTTGTCACACAACTCACTTAGTGGTAGTCTACCTAGTGAAGTGGGCAAGCTAAGAAATATTGGTTGTCTAAATGTC TCCGAGAATCAACTGTCAGGTGATATTCCAGGAACCATTGGAGAATGCCTGGGTATGGAGTACCTTTTTTTACAAGGGAA TTCCTTCCATGGAATCATACCATCCTCTTTAACTTCACTCAAAGGTCTTCGATATTTAGATCTCTCCCGGAACCACTTGT CTGGATCAATTCCTAAAGATCTACAGAATAATTTGTTCTTGGAATACTTCAATGCTTCTTTCAACGTGTTAGAGGGCGAA GTACCAACTACAGGTGTGTTTCAAAATGCAAGCGCGTTAGCAGTGACAGGAAACATAAAGCTTTGCGGAGGTATTCTAGA GCTGCATCTACTGCCATGTCCTGTCAATAGTATGAAGCATGCAAAACACCATAGTTTCAAGTTGATAGCAGTGATAGTTA GTACGGTTGTTTTTCTTCTCATTCTATCATTTATTCTAACCATCTACTGGTTGAGGAAAAGAAACAAGAAACCATCTTCT GATTCACCAACAATGGACCAGCTGGCTAAGATTTCATACCATGACCTACATCGTGGAACCAGTGGGTTCTCAGCTAAAAA CTTGATTGGATCTGGAAGCTTTGGTTCTATATATAAAGGAAATATTGGGTCAGAATATAAAGACGTTGCCGTAAAGGTCC TAAAGCTTCAAGAGAAGGGAGCTCACAAGAGTTTCATTGCTGAATGTGATGCACTAAAAAATATTAGACATCGGAATCTG GTTAAGATCTTAACATGTTGCTCCAGCACAGACTACAAAGGTCAAGAATTTAAAGCTCTAGTTTTTTAGTACATGAAAAA TGGAAGCTTAGAACAGTGGCTGCATCCAGGAAGTGGAAATGTAGAGCTTCATGAACCACTAGACCTTGAACAAAGATTAA GTATCCTTATTGATGTTGCTTCTGCATTACATTATCTTCATCATGAATGCGAGCATTTGGTACTTCATTGTGATCTAAAG CCGAGCAATGTCCTTCTTGACGATGACATGGTCGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAACTGTTGA TGGTTCCTCTCAGAAGCAAACTAGTACAATTGGAATAAAGGGAACTGTTGGTTATGCTCCTCCGGGTATTTTCTGAACTG TTGAATAATTGTTTCTTCATATTCTCCTATTGTTTGGTGTAAACTTGATATAGAGTATTTACGTTTTTTATATATATTTC AGAGTATGGAATGGGCTCTGAAGTGTCCACATATGGGGATATTTATAGCTTCGGGATTCTAGTATTGGAAATGCTTACCG GAAAAAAGCCTACAGATGAGTTGTTTGAAGACGGTCAAAATCTGCATAAGTTTGTGGGAAATTCATTTCCTGATAACCTT GTACATATTTTGGACCCACATCTTGTATTAAGAGATGAAGAAGTAACAGAAGTAGAAAACATAGTGAATCTTATTCCAAC TGTTGAGAAGTGCTTAGTTTCACTTTTGGGGATTGGACTTGCTTGTTCAGTCGAATCACCAAAAGAAAGGATGAACTTAG GGGATGTCATCAAAGAGCTAAATAAGATCAAAAAGGCATTTCTTGTTGGTTAGATCAATTGAGATTTATAAATGCTTAAT TGCATCTGCTACAGTTTGAGCTTTTAGCTAATAACTTGTTGTGTAATTATTTGTTTGTCTGCCTTAATCTTGTTATACAT TATGAAATTCCTAAACTATGGAAGTAATAGGCATATTATTCAATTTGAGATGTTCTTGCTAAAGCTGGAGTCAAATGTGG CAGTATAATACAATGTAACAGCTAAACTGTCGCTGCGGAATTGTTCATCTTTCATGTAACATATATCAATAGTATCCCAA GCCAAAATCTAATACCAATCGTGTAGAAAAGAAATGAAGGAAGGAGATCAGGAATCAGGATTATGAGCCACTGGTCTAGC TGGCTGTCAAAGTTGTGTCATTGAGATGTAGAACTGGAATGAAGGTGTGGTTGCAGAGAACTGGAGGATTATTTAAGTCC AAAACTGACTATAGAGCTCCCTAATCTAATACTCAACAGCAAACACAGACACAAAATACAGCACTATAGTATTGAGAAAC AACAAACAGTTGAAGAACATACCTCAGGTTATGCTCATTGCAACTCTCAATAACAGAGATATCTGATGCATTGTATTTTA AACTTTCTCCTTGCCATCTTGGTGAAACTCATCTTTGAGAGTCACAATACTGAGGGAATCCACATTTTCATAAACCTTCC CTAACCTGGTACATACAAGAAGTTATTTTCACATGAAAGAAAAATCTTGGAACAAACAATTCTTCAGTAATTAATATAAG TGAAAGGTCTGAGTGAATGCCATATCTTAAGATTCCAATAGTCAGAAATGTATATTTTTTGCAAAAGTCTAGGTTCATAG TATCATAATTCATAATTGTTCTAAAGTTTGTAAATAAGGTGTTTCCATTTTTCAAATATTATTGGATTTAAAGGAATATT GTACAGGACATTTGCAGTATGTATATATACAAATATATATCAAATGATAATATTAACTAAAATAGAAGAGAACAAAATAA AAGTTGACTGAAGTACATATGAAAAGCCATAACATGAAAGAGGTTTTCTTCTGGACTCTGAAACTTTATAAGATTTTCTC AGCATTGTTGTTCTTGAATAACCATGAACACAAAAACTTGAACCCATTATAAGTGTATTGAGCAGTACCTGTGGATTTGG GTGAAGCACAGAATAAAGGGTGTGCAAGGATCAACCATTGACTCTCATCAGCTGCATAAATCTCTTTAACTCCCCAGATT TCACAACACAGAAGCAATATCATCATCTGTTTATGTCATTGCCAACAACAATTGATAGCTTCCATTTCAATGTGAATTGG TGAACCCACTTGGCCCCGTCCCTGTAATTCTGCCATCCTTTCAATAAAGCAAAGTAAGAGCATCTCGGATGTCGGCGGTG CCTGATCCAAGACCCGGGGTCAGGGGTTCAAATTTTTTAATGAACACGTTGATAAAAATATAATTAAAAATAACTATACA TCAGAAAATATATAAGTCCATAATTGATACAAATAGGTGGATTTTTGGTGTAAGTAGGTGTAAAACTTAGTCTAATAGTA TAATTTAAAATTTTCAGGGTTTAAAAAAAATTATATAGGGAAATAAGGGCAATTTTTTTTGTTCTGAACCCCCTGAACAT AAGGTAGATCCGCCCCTGGATGTGGGTTCCTTAGTGCTGTTTGACATTCCGTTAGAAACGTGGTGTTTGAATTAATGTGA TTTTGTTAAAATGGTTTTGAGAAAAATTGTGTTTAAATAAATGTAATTTATGTTTGGATGATTTGTAACAAACGTGATTT GGAAATAATGAATATCTTTTGGATGATATTAATTACTTACGCTTGAAAGATGTAATTAAAAAAAGAGTTTAATTTTGATG CACCGACGGTGTAAAGTTTTTTTACACTGTCAACCAATCAGATTTCAAGGATGTAGCATGTCAATTAATGAAATTAAATA AAAAGAGAAATTTTCTCACATCTTTGAAATCTGATTGGTTGACGGTGTAAAAAAACTTTACATCATCCCTACATCAAACT TTTTCTCTTAAAAAAATATCACTCCTTTTGCATTAAATCAAATTAAAGACATTTCATAAAACTTAAAATTAACAAATCAA CTGGTTCAATTTTTTTTTTTAACAAATCAACAAATTAGTATGCCACGTTCAAAAACAAAACAAATTAAGTTTATAATAAT GCTGTTACTCAAAATCCAACAGCATTATAAATTCATTAAGTTTGTTAAAATAAAATTCATTAAATTGTTTTAAAAAAAGG CTGAATAAAAATATAAACCGTGAAATGACTTTGACAAAAATATAAAAAAAAAAACCAGAGAGAACGCGTAACAGTAAAAG GAAGGAGAAAGAAAGGACGAGTTGAACAGAGATGGAGTCGCCGAGCGTGAGCGGCGGACGGAGTTGGCGCACGAACGGTA GATCGCGAGCGGAGTCGCACAGATCTGAGAAGAACGACAGAGCATGAACGGAGTTGCACAAATCCAAGAAGAACGGCGGA GCGCAAACGAAACTACACAGATATGAGAATACGTGCGCGCGAACTGGCGACGGCGGAGGAGGGCACAACTGGTGGCTGAC AGGATGCGTCGGATCTGGTTGGTGAAAGCCAGAAAAATCAGCGTTGAACGTCAAACGCCCAACGCCACAGCTCCAATTTA TCAATTCCAAAAAAACGTTGTTTTGGCCCAAATTCGCGTTCATGCGCTTAGAAAAACACCCATCCAAACGGTGTGGCAAA GCTGGTGAACCGCGTTTCTCTAAATGCAACGCACGTTTCGCCCCTCTAACGCCCATCCAAACAGGCCCTTAATCCAGTTG AAGCACTTAAACAGCAACCTTGCAGTTTGGAATATCATTTGAGCACCATGAGAGTTTGCCTGCTTATTATTATTATCTGC TTTTTGACTAAAAAATTATATTTTATCTTTCATTCGTTAACTGAAATAATATCATGATCTTAAAATAATATATATATATA TATATGAGGTTTAATGAGACTCAACTAAA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0347000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAAAATGGAAGCTTAGAACAGTGGCTGCATCCAGGAAGTGGAAATGTAGAGCTTCATGAACCACTAGACCTTGAACA AAGATTAAGTATCCTTATTGATGTTGCTTCTGCATTACATTATCTTCATCATGAATGCGAGCATTTGGTACTTCATTGTG ATCTAAAGCCGAGCAATGTCCTTCTTGACGATGACATGGTCGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCA ACTGTTGATGGTTCCTCTCAGAAGCAAACTAGTACAATTGGAATAAAGGGAACTGTTGGTTATGCTCCTCCGGAGTATGG AATGGGCTCTGAAGTGTCCACATATGGGGATATTTATAGCTTCGGGATTCTAGTATTGGAAATGCTTACCGGAAAAAAGC CTACAGATGAGTTGTTTGAAGACGGTCAAAATCTGCATAAGTTTGTGGGAAATTCATTTCCTGATAACCTTGTACATATT TTGGACCCACATCTTGTATTAAGAGATGAAGAAGTAACAGAAGTAGAAAACATAGTGAATCTTATTCCAACTGTTGAGAA GTGCTTAGTTTCACTTTTGGGGATTGGACTTGCTTGTTCAGTCGAATCACCAAAAGAAAGGATGAACTTAGGGGATGTCA TCAAAGAGCTAAATAAGATCAAAAAGGCATTTCTTGTTGGTTAG
Download CDS Sequence

Protein sequence (LotjaGi2g1v0347000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKNGSLEQWLHPGSGNVELHEPLDLEQRLSILIDVASALHYLHHECEHLVLHCDLKPSNVLLDDDMVAHVSDFGIARLVS TVDGSSQKQTSTIGIKGTVGYAPPEYGMGSEVSTYGDIYSFGILVLEMLTGKKPTDELFEDGQNLHKFVGNSFPDNLVHI LDPHLVLRDEEVTEVENIVNLIPTVEKCLVSLLGIGLACSVESPKERMNLGDVIKELNKIKKAFLVG
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27008:SF200
1 227 227 1.1E-123 –
ProSiteProfiles
PS50011
1 225 225 25.432
IPR000719
SMART
SM00220
1 224 224 4.9E-6
IPR000719
PIRSF
PIRSF000654
1 147 147 6.0E-19 –
Gene3D
G3DSA:1.10.510.10
1 224 224 9.6E-59 –
PANTHER
PTHR27008
1 227 227 1.1E-123 –
SUPERFAMILY
SSF56112
1 217 217 2.93E-45
IPR011009
Pfam
PF00069
2 140 139 6.7E-23
IPR000719
ProSitePatterns
PS00108
50 62 13 -
IPR008271
PIRSF
PIRSF000654
184 225 42 43.0 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0347000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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