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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0353200 |
| Transcript ID | LotjaGi2g1v0353200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Monosaccharide-sensing protein 2; TAIR: AT3G51490.2 tonoplast monosaccharide transporter3; Swiss-Prot: sp|Q9SD00|MSSP3_ARATH Monosaccharide-sensing protein 3; TrEMBL-Plants: tr|G7K2K7|G7K2K7_MEDTR Tonoplast monosaccharide transporter 2; Found in the gene: LotjaGi2g1v0353200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:82958515..82963264) extracted from Lotus japonicus Gifu genome v1.2.
ATTAATCCTTTATTAAATTAAATATTTTGAGCTGGCACATTCTTTTGACCTTCAATTTAATTAATTAATCAAACAAATTG ATTATAAACTCAAAAAGGAAAAAAACCATATTTGCAGTCTCGTACAGCTAAGTGTGAGGAGATTGAGGTTGAGACTTGAG ATAGATATGTTTTGAATTTTGATTTGCTGATAATGCATCCATCCAACTTGGAACATCTGAAACTGAAACCAACAACACTC CAGCATGTTCAGTCAGAGACATGCCTGCACATACACATACACATACACATACACACAGCTATTTATCTTGTGAACACTGA TTGCCTATCAAGATCTCACAATCACAATTGCTCCAAAGTTTTCAATCTGAGTACAAGTTATTGTTGGGTTTTGGATTTCT CTAACCAAATCAAAAAATGTTGCCAGTTGTGATTGTTGCAGTTGCTGCTACACTTGGGAATCTCCTGGTCGGATGGGATA GTTCAACAATTGCTGGTATGTTTTTTTTTTTTAATTTGGTTTTTTATAATTATCTGTTGTTTCAAGTGGTTTTGTAGATA TCCATGTTGTGTTTGTGTGTGCTTATCTGAAAATCTAGAGCTCATGCATGTGTTATTGTGTGATAATAGATTTAGGATAA TAGTTGTCTTTGGTTTTTGGTGGTATTCTGATTTGAGGACATGAGATTGAAATGCTTACCCTAATTCTGAAATGTTTAGG ATGAAAAGTAGATAATGGTTAGTGTTGCAAAAAATTAGGTTAGATCTCATTACTAGAATTGAACAAACATGTTTGGTCTT CTTGCAGGGGGTATGACCTACATGAAGGTGGAATTCAACTTGGAGACAAATCCCACACTTGAAGGGTTAATCGTGGCCAT GTCATTCATAACCGGAACCGTTGTTACAATCTTCTCTGGGACAGTATCTGATTTGGTTGGAAGGCGCCCTATGCTGATAA CATCTTCTCTCATGTTTTTCGTTAGCGGATTGATAATGTTGTGGGCTCCTAATGTTAGTGTTGTTCTCTTGTCGAGGATA CTTAACGGGGTTGCTGCTGCTCTTGCCGTCACTTTTAATCCTCTCTATATATCCGAGATCGCGCCGGCGGATATCAGAGG CCAATTGAACACTATTACACAGTTTGCTTGCTCTGGTGGAATGTTCTTGTCTTATATCTGGGTGTTCTCAATGTCCTTGA TGCAATCGCCAAATTGGAGAGTCATGCTCAGTGTTATTTCTATTCCTTCTATTGTATATTTTGCTCTGGCCGTGTTTTAT CTGCCTGAATCTCCAAGGTGGCTTGTGAGCAAAGGGCGAATCCGTGAGGCTGAAAAAGTTTTGCAAAGGCTTCGCAATGC TGAAGACGTTTCTGGTTAGGCATGATTTTCTCTTGTTGTTATTTTCAATTATCTGTATCATTATTTTCTATCGAGTGTGT GTTTGGTTTTCCATCGTAAACCGCAGAATCAATTCTGATACAGTTCTGCTAGAAGCTTAGAGTGAGTAGCTCTGCGTTTT TGTTTTAAAACAGGATTTCGCCACATTACCCTGTAAAAAACACTTTTTTCATAAATGTATCCAAACATAAAGCACTTTAC TTTCAACTCACTTTTAATACAATCAATTTTACTAAAATCAATTTGTGACAACGCCGATCAAAAGATGCACTGATTAGGAG TTAATTTTTTTATCTATAGGGGAGTTGGCTTTGTTGGCGGAGGGTCTCAGCCCTGGGGGTGAAGACATTTCCATAGAAGA GTATGTAGTTGCTCCGGCCAGTGATTTCCTTGTGAACCAGGAAGCAGGGAAAGATTACATAAAGTTATATGGACCCAATG AGGGTGTTGCAATGGTTGCTCAACCAGTTACTGGACAGGGTAGCATGATGTCCCGCAGCATGTTGTCCCGCAGCATGTTG TCTCAGCAAGGAAGCTTTACATCTCAGGCTGCAGCTGGTTTTAAGGATCCTATTGTCAATCTCTTTGGAAGTTTGCATGA GAGTAATCTTGCTGAGAATGAAGGTTCACGCAGCATGCTAGTTACTCATGCCAACAGTATCTTTAGTGTGGGGGATCCAG AGTCCAGCCCCTTTGACACCAGTGACAACCTGCGTGCTCCGCTAATGTCATTTCAAGGCGGTGCTGGGGAGAAGGATAGG GCTTATGGATCCAAGGACATGTTAGGTATGGGGAGCAATAGCTATCTCAGAAGTAATAGCAGTTTGGTCCATGGAAATGC TGGCGAAACACCTAGAAGTACAAACATTGGCGGAGGCTGGCAATTGGTTTATAAATCAGCCGACGGTGGTGCTGGGGGTG GGAAAAGAGAAGGGCTCCAAAGGGTTTATTTGCATGCAGATCCTGCCGCAGTGTCTCACTCTCAACATGCTTCATTTGTT TCAACTTCTGGTTATGACATGGCGATAGATGGTGGTGAAGTTTATCAGGCTTCTGCTTTAGTCAGCCGGTCGGTTCTAGG TACTAACGATATATTGAAGATGCCTGAAGTTTCTGCAAAAGGTCCAAGTTGGAAAGGTCTGCTAGAACCAGGAGTCAAGC GTGCATTAGTGGTTGGGATAGGACTTCAAATTCTTCAACAGGTACAATTAGTTGGCATTGTATGAGTATTACATCACTTT ACTATGTTGTATCCTGCTATAATCATGCATGCATTCATCATATAATTGGATAGTTATCCACATTTTAAAATTATGTTGGA AGTTGTTCTTTACCCACTATTAGTCTCTGCATTTTAGAGGATTAATAATCATAAAGTTAACTAGTGATGAGCTCTGGATT CTTGATATGACGATTCCATACTTTTAAGTCTTCTTCAAATGCATCTTTAGGTAATGTTTGATTTAGGCCAGAACATAAAT TAAAAGCAGAGTAGAACAGGACATAAGGTAGGAAAAGTGATACATTTTGGTTCCACTTAAAATATTGGAATCAAAGAGAA GTAGAGAACAGAACAAAACACGTTGTCTTGTTCGATTCTGTCTGCGTGTCAAAAGCTACCATAATATGCATAATTACAAT CTACTCTTACTTTGCAATTTCTTTACACGACAATGCCCCCATTATCTTAATTATTTTCCCTTTCCCCATTCTATCTGTCC TTCTTCATCATCTCATATTTCTGGCAATTTTGACAAAGTTCTTGGTTACATACTAAACATAGAGTTTCTAGGTGTGCATT TCCTCACAATTTAAAATTATCTAGAGCAAACAATATCAATGATGTACAAATGCATATACACTGGCTTCTTTTTTATTCTG AAAATACGATATATATTGCAGGCTGCTGGCATAAATGGGTTTCTATACTATGCTCCCCAGATTCTCCAGGAGGCGGGAGT AGGGTCTCTTCTGTCAAATTTGGGCATTAGTTCAACATCTGCTTCTTTTCTTGTAAATATCATCACAACATTCTGTATGC TTCCTTGTATAGCTATTTCTATAAAGCTCATGGATATTGCTGGCAGGAGGTATGTTTAAACTATGGTTTCTATATTTCAT GTTAATTTGGTTTCTAATTCATGTTCGAAGTGAAAGCCTTAACCGTATTACTACAATGGCTTCATTGCTATTCCGCGTTT ATAATCTATCTAGTGTCCTACTAGTGCAAGATTTGTCTCACTACAATGACTTTATATATTCTCTCATGGCAGGTCAATCA TGCTGTATACAACACCCATTTTGATTGTTTGTCTCCTGATACTAGTGCTCCGCGAGTTCTTTTACCTCAGTTCGGTCCTC GATGCCGCAATAACCGCTGTTTGTGTTATCGTCTATGAAAGCGTCTTCTGCATGGGCATAGGTATTATTCCCAACATCAT ATGTGCCGAGATCTTCCCAACCAATGTTCGCGGAATCTGCATTTCTCTGACTTCCCTCACATATTGGGTTTGCACCTTGA TAGTCACTTTGGCATTTCCCTATCTGCTCCAGCTCATAGGCCTCACTGGTGTCTTTTCACTATTTGTTGGTGGCTGCATT ATTACATTGATATTTGTCTACTTGAAAGTGCCTGAAACAAAGGGCATGCCTTTGGAAGTCATCATCGAGTTTTTTGCTAT TGGTGCAAAGCCTGGTACTGATCCTGCCACAATAGGAATCAAAGTTTGACATCATAGAGATATGATGATCATCTTCATAA GAAGCAGCATTAATCATTGATGAATTTAGAAGTATGGTTGGTTTTGATTCACCTGAAAGTGAGTTAAGAAGATTTTGTGG TTGATTGAAGCTATTTGGTGTTTGAACATAAATATCTAGTAGTTGTTTATTAGTTTAATTTACATGCTATGATTAATGAT TAGAGAGAGTAGTGGTCCTTTTATATTCTTTTTGCCACTTCCATTCCTGGGCATTTGAGTTTTCTCCATGCTTTGCAGTG TTCTGGTGACATTTGAGGTTTGAAAAGGTTATCACAAATAATAGTTGTATTCTTAAATAAACGTTTCAGTTGAGGGCTCA TTGTAGATGTTATCAGACACTAGAATTAAACAGGACAGCATGAGAGACACCTCAGAAAATTAGAACATGTACATGGAAAC AATTGCTATTTTATCAATTGAAGCTATAGCCTATTACTAAAATGATAATATGCAACAGGTTACAGGAAAATTATATAAAA TTAGTACTCAGCTATTAAAATTGGTACCATTCAGAATGCAATCCACCCAAGCAGCCCCCTTGAATAATTGGAATAATTGG AAACACTTTCTCAATAGCATGACCAGTTCC
CDS sequence (LotjaGi2g1v0353200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGCCAGTTGTGATTGTTGCAGTTGCTGCTACACTTGGGAATCTCCTGGTCGGATGGGATAGTTCAACAATTGCTGG GGGTATGACCTACATGAAGGTGGAATTCAACTTGGAGACAAATCCCACACTTGAAGGGTTAATCGTGGCCATGTCATTCA TAACCGGAACCGTTGTTACAATCTTCTCTGGGACAGTATCTGATTTGGTTGGAAGGCGCCCTATGCTGATAACATCTTCT CTCATGTTTTTCGTTAGCGGATTGATAATGTTGTGGGCTCCTAATGTTAGTGTTGTTCTCTTGTCGAGGATACTTAACGG GGTTGCTGCTGCTCTTGCCGTCACTTTTAATCCTCTCTATATATCCGAGATCGCGCCGGCGGATATCAGAGGCCAATTGA ACACTATTACACAGTTTGCTTGCTCTGGTGGAATGTTCTTGTCTTATATCTGGGTGTTCTCAATGTCCTTGATGCAATCG CCAAATTGGAGAGTCATGCTCAGTGTTATTTCTATTCCTTCTATTGTATATTTTGCTCTGGCCGTGTTTTATCTGCCTGA ATCTCCAAGGTGGCTTGTGAGCAAAGGGCGAATCCGTGAGGCTGAAAAAGTTTTGCAAAGGCTTCGCAATGCTGAAGACG TTTCTGGGGAGTTGGCTTTGTTGGCGGAGGGTCTCAGCCCTGGGGGTGAAGACATTTCCATAGAAGAGTATGTAGTTGCT CCGGCCAGTGATTTCCTTGTGAACCAGGAAGCAGGGAAAGATTACATAAAGTTATATGGACCCAATGAGGGTGTTGCAAT GGTTGCTCAACCAGTTACTGGACAGGGTAGCATGATGTCCCGCAGCATGTTGTCCCGCAGCATGTTGTCTCAGCAAGGAA GCTTTACATCTCAGGCTGCAGCTGGTTTTAAGGATCCTATTGTCAATCTCTTTGGAAGTTTGCATGAGAGTAATCTTGCT GAGAATGAAGGTTCACGCAGCATGCTAGTTACTCATGCCAACAGTATCTTTAGTGTGGGGGATCCAGAGTCCAGCCCCTT TGACACCAGTGACAACCTGCGTGCTCCGCTAATGTCATTTCAAGGCGGTGCTGGGGAGAAGGATAGGGCTTATGGATCCA AGGACATGTTAGGTATGGGGAGCAATAGCTATCTCAGAAGTAATAGCAGTTTGGTCCATGGAAATGCTGGCGAAACACCT AGAAGTACAAACATTGGCGGAGGCTGGCAATTGGTTTATAAATCAGCCGACGGTGGTGCTGGGGGTGGGAAAAGAGAAGG GCTCCAAAGGGTTTATTTGCATGCAGATCCTGCCGCAGTGTCTCACTCTCAACATGCTTCATTTGTTTCAACTTCTGGTT ATGACATGGCGATAGATGGTGGTGAAGTTTATCAGGCTTCTGCTTTAGTCAGCCGGTCGGTTCTAGGTACTAACGATATA TTGAAGATGCCTGAAGTTTCTGCAAAAGGTCCAAGTTGGAAAGGTCTGCTAGAACCAGGAGTCAAGCGTGCATTAGTGGT TGGGATAGGACTTCAAATTCTTCAACAGGCTGCTGGCATAAATGGGTTTCTATACTATGCTCCCCAGATTCTCCAGGAGG CGGGAGTAGGGTCTCTTCTGTCAAATTTGGGCATTAGTTCAACATCTGCTTCTTTTCTTGTAAATATCATCACAACATTC TGTATGCTTCCTTGTATAGCTATTTCTATAAAGCTCATGGATATTGCTGGCAGGAGGTCAATCATGCTGTATACAACACC CATTTTGATTGTTTGTCTCCTGATACTAGTGCTCCGCGAGTTCTTTTACCTCAGTTCGGTCCTCGATGCCGCAATAACCG CTGTTTGTGTTATCGTCTATGAAAGCGTCTTCTGCATGGGCATAGGTATTATTCCCAACATCATATGTGCCGAGATCTTC CCAACCAATGTTCGCGGAATCTGCATTTCTCTGACTTCCCTCACATATTGGGTTTGCACCTTGATAGTCACTTTGGCATT TCCCTATCTGCTCCAGCTCATAGGCCTCACTGGTGTCTTTTCACTATTTGTTGGTGGCTGCATTATTACATTGATATTTG TCTACTTGAAAGTGCCTGAAACAAAGGGCATGCCTTTGGAAGTCATCATCGAGTTTTTTGCTATTGGTGCAAAGCCTGGT ACTGATCCTGCCACAATAGGAATCAAAGTTTGA
Protein sequence (LotjaGi2g1v0353200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPVVIVAVAATLGNLLVGWDSSTIAGGMTYMKVEFNLETNPTLEGLIVAMSFITGTVVTIFSGTVSDLVGRRPMLITSS LMFFVSGLIMLWAPNVSVVLLSRILNGVAAALAVTFNPLYISEIAPADIRGQLNTITQFACSGGMFLSYIWVFSMSLMQS PNWRVMLSVISIPSIVYFALAVFYLPESPRWLVSKGRIREAEKVLQRLRNAEDVSGELALLAEGLSPGGEDISIEEYVVA PASDFLVNQEAGKDYIKLYGPNEGVAMVAQPVTGQGSMMSRSMLSRSMLSQQGSFTSQAAAGFKDPIVNLFGSLHESNLA ENEGSRSMLVTHANSIFSVGDPESSPFDTSDNLRAPLMSFQGGAGEKDRAYGSKDMLGMGSNSYLRSNSSLVHGNAGETP RSTNIGGGWQLVYKSADGGAGGGKREGLQRVYLHADPAAVSHSQHASFVSTSGYDMAIDGGEVYQASALVSRSVLGTNDI LKMPEVSAKGPSWKGLLEPGVKRALVVGIGLQILQQAAGINGFLYYAPQILQEAGVGSLLSNLGISSTSASFLVNIITTF CMLPCIAISIKLMDIAGRRSIMLYTTPILIVCLLILVLREFFYLSSVLDAAITAVCVIVYESVFCMGIGIIPNIICAEIF PTNVRGICISLTSLTYWVCTLIVTLAFPYLLQLIGLTGVFSLFVGGCIITLIFVYLKVPETKGMPLEVIIEFFAIGAKPG TDPATIGIKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Gene3D | 2 | 329 | 328 | 4.2E-55 | – | |
| Phobius | 4 | 14 | 11 | - | – | |
| PANTHER | 4 | 722 | 719 | 1.1E-283 | – | |
| PANTHER | 4 | 722 | 719 | 1.1E-283 | – | |
| TMHMM | 4 | 26 | 23 | - | – | |
| ProSiteProfiles | 7 | 702 | 696 | 30.795 | ||
| Pfam | 7 | 220 | 214 | 2.3E-47 | ||
| SUPERFAMILY | 9 | 707 | 699 | 5.23E-58 | ||
| CDD | 10 | 193 | 184 | 2.49302E-47 | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| PRINTS | 15 | 25 | 11 | 3.9E-10 | ||
| Phobius | 20 | 42 | 23 | - | – | |
| Phobius | 43 | 63 | 21 | - | – | |
| TMHMM | 46 | 65 | 20 | - | – | |
| ProSitePatterns | 63 | 80 | 18 | - | ||
| Phobius | 64 | 74 | 11 | - | – | |
| Phobius | 75 | 94 | 20 | - | – | |
| TMHMM | 75 | 92 | 18 | - | – | |
| Phobius | 95 | 99 | 5 | - | – | |
| TMHMM | 99 | 121 | 23 | - | – | |
| Phobius | 100 | 121 | 22 | - | – | |
| PRINTS | 100 | 119 | 20 | 3.9E-10 | ||
| Phobius | 122 | 132 | 11 | - | – | |
| Phobius | 133 | 153 | 21 | - | – | |
| TMHMM | 136 | 158 | 23 | - | – | |
| Phobius | 154 | 164 | 11 | - | – | |
| Phobius | 165 | 185 | 21 | - | – | |
| TMHMM | 165 | 187 | 23 | - | – | |
| Phobius | 186 | 503 | 318 | - | – | |
| Gene3D | 464 | 715 | 252 | 2.9E-49 | – | |
| Pfam | 488 | 710 | 223 | 4.8E-39 | ||
| CDD | 503 | 700 | 198 | 9.65826E-43 | – | |
| Phobius | 504 | 527 | 24 | - | – | |
| PRINTS | 515 | 525 | 11 | 3.9E-10 | ||
| Phobius | 528 | 546 | 19 | - | – | |
| Phobius | 547 | 569 | 23 | - | – | |
| TMHMM | 547 | 569 | 23 | - | – | |
| ProSitePatterns | 569 | 586 | 18 | - | ||
| Phobius | 570 | 580 | 11 | - | – | |
| TMHMM | 581 | 603 | 23 | - | – | |
| Phobius | 581 | 598 | 18 | - | – | |
| Phobius | 599 | 609 | 11 | - | – | |
| Phobius | 610 | 635 | 26 | - | – | |
| PRINTS | 614 | 635 | 22 | 3.9E-10 | ||
| TMHMM | 618 | 640 | 23 | - | – | |
| Phobius | 636 | 646 | 11 | - | – | |
| PRINTS | 637 | 649 | 13 | 3.9E-10 | ||
| TMHMM | 647 | 669 | 23 | - | – | |
| Phobius | 647 | 667 | 21 | - | – | |
| Phobius | 668 | 672 | 5 | - | – | |
| Phobius | 673 | 696 | 24 | - | – | |
| TMHMM | 674 | 696 | 23 | - | – | |
| Phobius | 697 | 730 | 34 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi2g1v0353200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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