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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0363000 |
| Transcript ID | LotjaGi2g1v0363000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vicilin-like protein; TAIR: AT2G28490.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9SK09|VCL22_ARATH Vicilin-like seed storage protein At2g28490; TrEMBL-Plants: tr|G7JQI3|G7JQI3_MEDTR Allergen gly M Bd 28 kDa protein; Found in the gene: LotjaGi2g1v0363000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86036322..86041110) extracted from Lotus japonicus Gifu genome v1.2.
TTGGATTGTATATTCTCACTCACTGAATCACAACCTGTCTGTCTACACATTACACCGCCAGCAAACCCACCAGAGTTCTA CATGAAGACACGCGTCTCTCTACATTCTCTTCATCATCCCTTCATAAACCACCCTTCATGACCTCATCATCCCTCAAATC ACAAAAAATATGCAATCAAACACAGTCATGGAAGGAAGCAAAACCACCCTTTTGCTCATGCTCCTTGTTGTTCTGTGCCA TGGAGTGGCCATCACAATAGGAGAAAGGACTTCATCTTCAAAGTCATCAAACAAGTTGTTCTTGATGCAGGATTCCAAGA GTGTGGTTAAGGCTGATGCAGGGGAAATGAGAGTGCTGGAAAGCCATGGTGGTAGGAGATTGGAGAGACTCATGCACATC GGTTTCATCACAATGGAACCAAAGTCCTTGTTCATTCCTCAGTACCTTGACTCCAATTTGGTTATATTTGTCCGTAGAGG TATCACAACATTCTTCAATTTTCTTTCTATATATGCTGAATCACACAAGGAATGTCATGCATGCTTGTCTTTTCTTTTGA AAGCTAAAAAAATGCATAAAACAGGAACATGTGAAACACCAAGAGACAACCCCTCTTAAGTAATCTAACTATATGTAGGG AAGTAACAATTTTGCCATGTAGCACTGAGGATTAAGTAAGTAGTATACCTTTACAATTTACACATTTTTTTTTCAAAAAA AAATTAAAATGGGAAATAACTCATGATTTAATGTTACTACTGTAGCATTGAAAAAAATGTTTGGAGGGAAGTTTGAGAAG GATATTGGTGTGAGAATGTCATCCAATCAGGTTTGCTCACAGTGACATACAGCATGTTTGGGTTCAGATCTTCTAGAATT GATTCTAGTGTTGATTCATGGTCAGATCTTTTAGAATCAATAGTGTTACCATAAAAGCTACTAGGTGTAGCTTCTTCCAC ATCAACTCTCCTTCCAATGTGTTAGAATGTATCCAAAGAATGTATCCATATATGCATGATGCCATGATATTATTAGGATG TCTTGAGGAAGTTTTACCATCATAACTAGTCTAACTATTTCAATGAAGTAAGTGCAATGATAGTATAAACACCATTAGAT TGAAAGGGCATCAAATTTTACATGTCATTTGAGAGTGAAGTTGGAAATTGTTTACAGGGGAAGCAAAGTTGGGGTTCATG TATGGAGATGAACTATCTGAAAGGCGATTGAAGACAGGGGATTTGTATGTAATTCCTGCTGGTTCTGCATTCTATTTGGT GAATTTAGGAGAAGGTCAGAGACTTCACATTATCTGCAGCATTGACACTTCTACTAGCATGGATGACACCTTCCAGGTAC GCGTCCATAATTTCACATCCTTCATCTCGTTATCAGCATTGTCATTTTTGAATATTGTGTTATCTTTTTATCAAAGTCTA ACATTATTCAATTTCATTTCGGCTATGCAGTCCTTCTATATTGGAGGAGGAGACAATTCACAGTCAATACTTGCTGGATT CGAGCCTGTGATCCTTGAAACTGCATTTAATGTAAGCTAATACATCAATATTAAAACATCAACTTCATAGTGAAGGTGAA AAGTTTCATGAACCAACTAAGTTTGAGTTAGGCCCCGTTTGGAAAAACAGCTTAATTAAGCACTTATGGCCATAAGCGCT TATGACATAAGCGCTTATTCATAAGCTATTTTTGAAAATTTATTAAAATAAATTAAAAATAAGCTGGATATAAGCATAAG CTGTTTTTCATAAGCTATCCTGAGTAGCTTATGAAAATAAGCTGAAAATAGCTTATGGCAGGTCATAAGCTGTTTGCACA AGCCCTCCCAAACACTGGCATAAGAGCTTATGCTGTCAGATAAGCTCAAATAAGCTCTTCCAAACTGGGCCTTATTCAAA GTTTAAGCCTTAAGCGCATCAACGGTTTTATATTATACATATTATAAGAAACAAGAAGAAATAGTTATCCCATGATTTCT CTCAAGCAATTGAGTTAACTCTAGCACAATAATTCTTGCATTTCTTGCAATTTTTCTTTTTAACACATAGCATTGCTATT TAGAAAATACTAAATCTTACTATACGAAATGCAGGAAGAGATAGTTACCCCTGATTTCTCTCAAACACAAGAGTTAACTC TAGCACATTAGTATTTCTTACATGTCTTGCAATTTGCCTTTTGCATTGTTGTTTATTAACTGTCACATCAGTATTTCTTT CATCTTCTGAAATTTTCCTTTGTAACATATAGCATTGCTATTGATTTACTCTATCACCTCAGGGTTTCTAGCAATTTTCA TTTGCAACATTTGCTGTATTTAATATGCTACTAGTACTAGCTCAAGAACCACTAGAGGTGAAGTGTGGCTTGAACTCTAA AATATTTGGTGCTTTCATATATGTCATCTAACAACTATTTCAAAAAAGTTTAAGTATCTTTAATAAAAAGAAAATCAACA CTCTAACACTAGACAGAAACTCTTAACAGATCTTTTTTCATTGATTATTATCACTCACAGGAATCAAGGGAGGAGCTAAG CAAAATCTTCAACAAGAGACTAGAGGGACCAATCGTGTTCGTGGATGATTCTCATGCCCCTAGCCTATGGACCAAATTCC TTAAACTGAAAAAGGAAGACAAAGTGCAATCCATGAAGGAAATGATGCAAGTCCAAGAAGAACACAATCAAGAAGAAGAA GAAGAAGAAAAGCAAACAAGTTGGTCATGGAGGAAGCTCTTAGAAACTGTATTTGGAAAGGAGAACAAGAAGGCAGATTT CAAAGGCACTGCAGATTCCCCTGACTCTTATAACCTCTATGATAAAAATCCTGATTTCAGAAACGATTATGGTTGGAGCA GTGCAATTGATGGAGCAGATTACCCTCCACTCAAAACAGTTGACACTGGTGTTTTCCATGTCAATCTCACAGCTGTAAGC AATGCAAAAAAAGCCTTTTCTACGTTTGGATAAGTTTTTTTTCCTCATAATCAATTCTGGAAATTTAGAAGCTACTTTAC GTGTTTGGATCAGCACTTGTCATAATTAATTTTGGTAAAATTGATTTTAGTAAAATTTAGTCAAAAGTGTAGTTTGGACA CATTTATGAAAAAGTGAGTTTTGTTGGGTAGTGTTGTGAAACTCAGTTGAGAAATCTCACAACTGATTATCTTCCACAAG CTACATTCTCTAGCTTCTACCAGAATTGATTTTATATCTGAAATAAAGTCTCGAAAATGATTTTTACTCTATCAGAATTG ATTATGCGTTTACTAATTTCTCCCATGAATTGATGATGACTTTAGAATCAACTGTAGAATAACTTTGGACTAAATATTTT ACTTGTAAAAATTCATGCAAACTAGTTACCATTTCTCACATTGGTTGTTTTCATGGTTGATTGCTTGTGTTATTTTGTGT GGCAGGGATCCATGATGGTACCCCACTTGAATCCAAGGGCAATGGAGTATGGCATAGTGCTGAGAGGCTATGGCAGAATT CAGATAGTGTTTCCAAACGGAAGCAATGCAATGGACACTGAAATCAAAGAAGGGGACGTGTTCTTTGTTCCAAGGTACTT CCCTTTCTGTCAAATAGCATCAAGGAGTGGCCCTTTAGAGTTCTTTGGGTTCAGCACCTCTGCCAGGAAGAACAAGCCAC AATTTCTGGTTGGTTCTGTGTCCCTTCTGAGGACCATGATGGGGCCTGAGCTCGCCGCCACTTTTGGGGTCCGCGAAGAC ACTCTGCGGCGTGTGGTGGATGCTCAGCGCGAGTATGTGATTGTGCCTTCAACATGGGCTGCACCAGGAGATGAAGGGGA GAAGGAGGAGGAAGAGGACAGTGTTAAGGTGAAGTTGCAGCAAAAGGGTATCCAAGGGTTTGATAATGGTGAGGTTTTGG GTGTTTTTGAATAGGGTCATGTCATTTGGAACAGAGATGTGTGGCACTAGTAGTGCTTGTTCCTGGTTTTTCCTTTTGTT CATATGTGCTTTATGTTATCTAGTTGTGAACAGATTGTACCTTCATGGTACATTTAACTTGTTCCATAAGTCTCAAAGGA ACGTCTCACCGGAATAATTCTGCTTTTAGAATCAATTATACCGGAATTAATAATGTTTTAGAATAAATTATAGAAGCATT TTGAAACATGCACCCTTTCATGTCATGTTTTCTTCTTTGAATTAGAGGTACTTTTCCCTTCTTGCTACTGCAGCTGAATT ATAAGAAGACTTGGGATTTGGCTGAGAAAAATTAACTTGACACATGAAAGTCACAATCTCAATCTTTCTTGCATAGTGCA TTTATATATCTGCGAATGAGACCTTTTGTATTATATGCAGATTAAGTGATAAGATGAATCTGAGAGAGTGAATTAGGAGG TTTCCTCTTGTGAATAATAGGTAGTGGTTTCCTTGTATCGTATTATTCTTTTGTTTTTTGGATAATCGGGGATGAGGCCA TAAGCCATTTGAGCTTACACTCATTAAGAGTTATAACCTCAACTGGTATACCAGACAAATATATATATATATGACTATAG ATAGATTTATAGTTTCCAACTTGAGTCACATGTCAATTGAAATTTTCAGCTCTCACTTTCCTGGCTATAATTTTCTCTAC GCCTCTTGTTTCTATTTCTGGTTTTGTGTAGTTTGGATCCATTCTACTCCTAATTCCTACTACTTTCTACCTAAAGTGGA GTTGTTTTTACTTCATAGTGCAACCTTTAATTCATAGGCTAGGTTTCTAAAGTACAGCTGTATAAGGCC
CDS sequence (LotjaGi2g1v0363000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAATCAAACACAGTCATGGAAGGAAGCAAAACCACCCTTTTGCTCATGCTCCTTGTTGTTCTGTGCCATGGAGTGGC CATCACAATAGGAGAAAGGACTTCATCTTCAAAGTCATCAAACAAGTTGTTCTTGATGCAGGATTCCAAGAGTGTGGTTA AGGCTGATGCAGGGGAAATGAGAGTGCTGGAAAGCCATGGTGGTAGGAGATTGGAGAGACTCATGCACATCGGTTTCATC ACAATGGAACCAAAGTCCTTGTTCATTCCTCAGTACCTTGACTCCAATTTGGTTATATTTGTCCGTAGAGGGGAAGCAAA GTTGGGGTTCATGTATGGAGATGAACTATCTGAAAGGCGATTGAAGACAGGGGATTTGTATGTAATTCCTGCTGGTTCTG CATTCTATTTGGTGAATTTAGGAGAAGGTCAGAGACTTCACATTATCTGCAGCATTGACACTTCTACTAGCATGGATGAC ACCTTCCAGTCCTTCTATATTGGAGGAGGAGACAATTCACAGTCAATACTTGCTGGATTCGAGCCTGTGATCCTTGAAAC TGCATTTAATGAATCAAGGGAGGAGCTAAGCAAAATCTTCAACAAGAGACTAGAGGGACCAATCGTGTTCGTGGATGATT CTCATGCCCCTAGCCTATGGACCAAATTCCTTAAACTGAAAAAGGAAGACAAAGTGCAATCCATGAAGGAAATGATGCAA GTCCAAGAAGAACACAATCAAGAAGAAGAAGAAGAAGAAAAGCAAACAAGTTGGTCATGGAGGAAGCTCTTAGAAACTGT ATTTGGAAAGGAGAACAAGAAGGCAGATTTCAAAGGCACTGCAGATTCCCCTGACTCTTATAACCTCTATGATAAAAATC CTGATTTCAGAAACGATTATGGTTGGAGCAGTGCAATTGATGGAGCAGATTACCCTCCACTCAAAACAGTTGACACTGGT GTTTTCCATGTCAATCTCACAGCTGGATCCATGATGGTACCCCACTTGAATCCAAGGGCAATGGAGTATGGCATAGTGCT GAGAGGCTATGGCAGAATTCAGATAGTGTTTCCAAACGGAAGCAATGCAATGGACACTGAAATCAAAGAAGGGGACGTGT TCTTTGTTCCAAGGTACTTCCCTTTCTGTCAAATAGCATCAAGGAGTGGCCCTTTAGAGTTCTTTGGGTTCAGCACCTCT GCCAGGAAGAACAAGCCACAATTTCTGGTTGGTTCTGTGTCCCTTCTGAGGACCATGATGGGGCCTGAGCTCGCCGCCAC TTTTGGGGTCCGCGAAGACACTCTGCGGCGTGTGGTGGATGCTCAGCGCGAGTATGTGATTGTGCCTTCAACATGGGCTG CACCAGGAGATGAAGGGGAGAAGGAGGAGGAAGAGGACAGTGTTAAGGTGAAGTTGCAGCAAAAGGGTATCCAAGGGTTT GATAATGGTGAGGTTTTGGGTGTTTTTGAATAG
Protein sequence (LotjaGi2g1v0363000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQSNTVMEGSKTTLLLMLLVVLCHGVAITIGERTSSSKSSNKLFLMQDSKSVVKADAGEMRVLESHGGRRLERLMHIGFI TMEPKSLFIPQYLDSNLVIFVRRGEAKLGFMYGDELSERRLKTGDLYVIPAGSAFYLVNLGEGQRLHIICSIDTSTSMDD TFQSFYIGGGDNSQSILAGFEPVILETAFNESREELSKIFNKRLEGPIVFVDDSHAPSLWTKFLKLKKEDKVQSMKEMMQ VQEEHNQEEEEEEKQTSWSWRKLLETVFGKENKKADFKGTADSPDSYNLYDKNPDFRNDYGWSSAIDGADYPPLKTVDTG VFHVNLTAGSMMVPHLNPRAMEYGIVLRGYGRIQIVFPNGSNAMDTEIKEGDVFFVPRYFPFCQIASRSGPLEFFGFSTS ARKNKPQFLVGSVSLLRTMMGPELAATFGVREDTLRRVVDAQREYVIVPSTWAAPGDEGEKEEEEDSVKVKLQQKGIQGF DNGEVLGVFE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 31 | 31 | - | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| SignalP_EUK | 1 | 31 | 31 | - | – | |
| TMHMM | 12 | 31 | 20 | - | – | |
| Phobius | 12 | 23 | 12 | - | – | |
| SUPERFAMILY | 14 | 445 | 432 | 3.33E-55 | ||
| PANTHER | 17 | 466 | 450 | 2.1E-203 | – | |
| PANTHER | 17 | 466 | 450 | 2.1E-203 | – | |
| Phobius | 24 | 31 | 8 | - | – | |
| Phobius | 32 | 490 | 459 | - | – | |
| Gene3D | 34 | 225 | 192 | 2.3E-52 | ||
| SMART | 44 | 197 | 154 | 2.5E-19 | ||
| Pfam | 52 | 192 | 141 | 7.4E-8 | ||
| Coils | 231 | 255 | 25 | - | – | |
| Gene3D | 275 | 451 | 177 | 2.1E-44 | ||
| Pfam | 287 | 432 | 146 | 3.9E-31 | ||
| SMART | 287 | 436 | 150 | 6.7E-54 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of LotjaGi2g1v0363000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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