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IPR006045 is a Cupin 1.
<p>This entry represents the conserved β-barrel fold of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins, and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant [[cite:PUB00005817], [cite:PUB00095171], [cite:PUB00095173]].</p> <p>This domain can also be found as a central component of many microbial proteins including certain types of phosphomannose isomerase, polyketide synthase, epimerase, and dioxygenase [[cite:PUB00007277]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: germin-like protein 5-1-like [Glycine max] gi|356572882|ref|XP_003554594.1| | 21 | ||
– | PREDICTED: germin-like protein subfamily 1 member 13-like [Cicer arietinum] gi|502090474|ref|XP_004489240.1| | 19 | ||
– | PREDICTED: germin-like protein subfamily 1 member 13-like [Cicer arietinum] gi|502090474|ref|XP_004489240.1| | 21 | ||
– | PREDICTED: glutelin type-A 2-like [Cicer arietinum] gi|502145140|ref|XP_004505897.1| | 8 | ||
– | PREDICTED: glutelin type-A 1 [Vitis vinifera] gi|225435090|ref|XP_002284459.1| | 10 | ||
– | Germin-like protein subfamily 2 member 4-like precursor [Glycine max] gi|359806913|ref|NP_001241578.1| | 16 | ||
– | PREDICTED: glutelin type-A 1-like [Glycine max] gi|356539076|ref|XP_003538026.1| | 11 | ||
– | PREDICTED: germin-like protein 9-3-like [Glycine max] gi|356544738|ref|XP_003540804.1| | 11 | ||
– | PREDICTED: vicilin-like antimicrobial peptides 2-2-like [Cicer arietinum] gi|502082350|ref|XP_004487139.1| | 9 | ||
– | PREDICTED: vicilin-like antimicrobial peptides 2-2-like [Glycine max] gi|356547194|ref|XP_003542001.1| | 16 | ||
– | Germin-like protein [Medicago truncatula] gi|357464681|ref|XP_003602622.1| | 22 | ||
– | Germin-like protein subfamily 1 member [Medicago truncatula] gi|357468889|ref|XP_003604729.1| | 18 | ||
– | Germin-like protein subfamily 1 member [Medicago truncatula] gi|357468889|ref|XP_003604729.1| | 13 | ||
– | PREDICTED: germin-like protein subfamily 1 member 18-like [Cicer arietinum] gi|502165338|ref|XP_004513533.1| | 13 | ||
– | Germin-like protein subfamily 1 member [Medicago truncatula] gi|357468889|ref|XP_003604729.1| | 21 | ||
– | Glycinin subunit G7 [Glycine max] gi|76096944|gb|ABA39287.1| | 20 | ||
– | Legumin storage protein 5 [Lotus japonicus] gi|206712292|emb|CAR78996.1| | 23 | ||
– | Legumin storage protein 5 [Lotus japonicus] gi|206712292|emb|CAR78996.1| | 14 | ||
– | Legumin storage protein 5 [Lotus japonicus] gi|206712292|emb|CAR78996.1| | 26 | ||
– | PREDICTED: germin-like protein 5-1-like [Glycine max] gi|356572882|ref|XP_003554594.1| | 21 | ||
– | Germin-like protein [Medicago truncatula] gi|357495757|ref|XP_003618167.1| | 21 | ||
– | Germin-like protein subfamily 1 member 1-like precursor [Glycine max] gi|359806194|ref|NP_001241459.1| | 19 | ||
– | PREDICTED: globulin-1 S allele-like [Cicer arietinum] gi|502161603|ref|XP_004512222.1| | 11 | ||
– | PREDICTED: globulin-1 S allele-like [Cicer arietinum] gi|502161603|ref|XP_004512222.1| | 12 | ||
– | PREDICTED: germin-like protein 9-3-like [Glycine max] gi|356542025|ref|XP_003539472.1| | 18 | ||
– | 11S seed storage globulin B [Chenopodium quinoa] gi|115343513|gb|ABI94736.1| | 19 | ||
– | Germin-like protein subfamily 3 member 4-like precursor [Glycine max] gi|359807630|ref|NP_001241421.1| | 19 | ||
– | PREDICTED: germin-like protein subfamily 3 member 4-like [Cicer arietinum] gi|502173445|ref|XP_004515331.1| | 13 | ||
– | Germin-like protein [Medicago truncatula] gi|357513973|ref|XP_003627275.1| | 21 | ||
– | PREDICTED: germin-like protein 8-14-like [Cicer arietinum] gi|502156426|ref|XP_004510468.1| | 21 | ||
– | Germin-like protein [Medicago truncatula] gi|357513969|ref|XP_003627273.1| | 21 | ||
– | Auxin-binding protein ABP19a-like precursor [Glycine max] gi|358248706|ref|NP_001240182.1| | 11 | ||
– | PREDICTED: glutelin type-A 2-like [Glycine max] gi|356512608|ref|XP_003525010.1| | 11 | ||
– | PREDICTED: glutelin type-A 2-like [Glycine max] gi|356512608|ref|XP_003525010.1| | 11 | ||
– | Glutelin type-A [Medicago truncatula] gi|357519369|ref|XP_003629973.1| | 11 | ||
– | PREDICTED: germin-like protein subfamily 3 member 2-like [Glycine max] gi|356546081|ref|XP_003541460.1| | 21 | ||
– | PREDICTED: sucrose-binding protein-like [Cicer arietinum] gi|502115357|ref|XP_004495184.1| | 9 | ||
– | PREDICTED: rhicadhesin receptor-like [Cicer arietinum] gi|502117451|ref|XP_004495826.1| | 21 | ||
– | Germin-like protein 16 [Glycine max] gi|196122036|gb|ACG69492.1| | 21 | ||
– | Convicilin storage protein 2 [Lotus japonicus] gi|206712296|emb|CAR78998.1| | 18 | ||
– | Convicilin storage protein 2 [Lotus japonicus] gi|206712296|emb|CAR78998.1| | 18 | ||
– | PREDICTED: germin-like protein subfamily 3 member 2-like [Cicer arietinum] gi|502121018|ref|XP_004497160.1| | 21 | ||
– | PREDICTED: auxin-binding protein ABP19a-like [Cicer arietinum] gi|502165228|ref|XP_004513480.1| | 19 | ||
– | Germin-like protein subfamily 1 member [Medicago truncatula] gi|357448633|ref|XP_003594592.1| | 13 | ||
– | Germin-like protein subfamily 1 member 1; TAIR: AT3G05950.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9SFF9|GL17_ARATH Germin-like protein subfamily 1 member 7; TrEMBL-Plants: tr|I3T902|I3T902_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0620000 | 20 | ||
– | Germin-like protein subfamily 1 member 1; TAIR: AT5G39100.1 germin-like protein 6; Swiss-Prot: sp|P92997|GL113_ARATH Germin-like protein subfamily 1 member 13; TrEMBL-Plants: tr|I3T902|I3T902_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0620100 | 20 | ||
– | 11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P11828|GLYG3_SOYBN Glycinin G3; TrEMBL-Plants: tr|B5U8K6|B5U8K6_LOTJA Legumin storage protein 5; Found in the gene: LotjaGi1g1v0709000 | 22 | ||
– | 11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P11828|GLYG3_SOYBN Glycinin G3; TrEMBL-Plants: tr|B5U8K6|B5U8K6_LOTJA Legumin storage protein 5; Found in the gene: LotjaGi1g1v0709200 | 22 | ||
– | 11S globulin seed storage protein; TAIR: AT1G03890.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P02858|GLYG4_SOYBN Glycinin G4; TrEMBL-Plants: tr|A0A072U489|A0A072U489_MEDTR Glycinin G4; Found in the gene: LotjaGi1g1v0709300 | 19 | ||
– | Germin-like protein; TAIR: AT1G09560.1 germin-like protein 5; Swiss-Prot: sp|Q6I544|GL52_ORYSJ Germin-like protein 5-1; TrEMBL-Plants: tr|I1NBL9|I1NBL9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0752400 | 20 | ||
– | Germin-like protein subfamily 1 member 1; TAIR: AT3G05950.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q6K5Q0|GL21_ORYSJ Putative germin-like protein 2-1; TrEMBL-Plants: tr|I3TAN5|I3TAN5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0242900 | 20 | ||
– | Germin-like protein subfamily 1 member 1; TAIR: AT3G05950.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q6K5Q0|GL21_ORYSJ Putative germin-like protein 2-1; TrEMBL-Plants: tr|I3TAN5|I3TAN5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0243100 | 20 | ||
– | Germin-like protein subfamily 1 member 1; TAIR: AT5G39150.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q6K5Q0|GL21_ORYSJ Putative germin-like protein 2-1; TrEMBL-Plants: tr|I3TAN5|I3TAN5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0243300 | 20 | ||
– | Germin-like protein subfamily 1 member 1; TAIR: AT1G10460.1 germin-like protein 7; Swiss-Prot: sp|P92998|GL11_ARATH Germin-like protein subfamily 1 member 1; TrEMBL-Plants: tr|I3SED7|I3SED7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0312900 | 19 | ||
– | Vicilin-like protein; TAIR: AT2G28490.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9SK09|VCL22_ARATH Vicilin-like seed storage protein At2g28490; TrEMBL-Plants: tr|G7JQI3|G7JQI3_MEDTR Allergen gly M Bd 28 kDa protein; Found in the gene: LotjaGi2g1v0363000 | 17 | ||
– | 11S globulin seed storage protein 2; TAIR: AT1G07750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07730|GLUA2_ORYSJ Glutelin type-A 2; TrEMBL-Plants: tr|A0A151TM61|A0A151TM61_CAJCA Glutelin type-A 1; Found in the gene: LotjaGi2g1v0368400 | 11 | ||
– | Vicilin-like antimicrobial peptides 2-2; TAIR: AT2G18540.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|F4IQK5|VCL21_ARATH Vicilin-like seed storage protein At2g18540; TrEMBL-Plants: tr|K7K4G2|K7K4G2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0392600_LC | 18 | ||
– | Vicilin-like protein; TAIR: AT2G28490.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9SK09|VCL22_ARATH Vicilin-like seed storage protein At2g28490; TrEMBL-Plants: tr|I1M4N3|I1M4N3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0160700 | 17 | ||
– | Germin-like protein; TAIR: AT1G09560.1 germin-like protein 5; Swiss-Prot: sp|Q652P9|GL93_ORYSJ Germin-like protein 9-3; TrEMBL-Plants: tr|I1LTW9|I1LTW9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0177800 | 17 | ||
– | 11S seed storage protein; TAIR: AT2G28680.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07728|GLUA1_ORYSJ Glutelin type-A 1; TrEMBL-Plants: tr|I3SN90|I3SN90_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0279200 | 11 | ||
– | 11S seed storage protein; TAIR: AT2G28680.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07728|GLUA1_ORYSJ Glutelin type-A 1; TrEMBL-Plants: tr|I3SN90|I3SN90_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0279300 | 11 | ||
– | Germin-like protein; TAIR: AT5G61750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9FLT3|GL34_ARATH Germin-like protein subfamily 3 member 4; TrEMBL-Plants: tr|I3SLD9|I3SLD9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0308000 | 19 | ||
– | 11S seed storage globulin; TAIR: AT1G03890.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P05190|LEGB4_VICFA Legumin type B; TrEMBL-Plants: tr|B9SF37|B9SF37_RICCO Legumin A, putative; Found in the gene: LotjaGi3g1v0333500 | 18 | ||
– | 11S globulin seed storage protein; TAIR: AT1G03890.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07728|GLUA1_ORYSJ Glutelin type-A 1; TrEMBL-Plants: tr|B9H8M5|B9H8M5_POPTR Legumin family protein; Found in the gene: LotjaGi3g1v0333700 | 11 | ||
– | Globulin-1; TAIR: AT2G28490.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9SK09|VCL22_ARATH Vicilin-like seed storage protein At2g28490; TrEMBL-Plants: tr|I1LKD3|I1LKD3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0365400_LC | 19 | ||
– | Germin-like protein; TAIR: AT5G20630.1 germin 3; Swiss-Prot: sp|Q9ZRA4|AB19A_PRUPE Auxin-binding protein ABP19a; TrEMBL-Plants: tr|I3S064|I3S064_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0414800 | 20 | ||
– | Germin-like family protein; TAIR: AT1G72610.1 germin-like protein 1; Swiss-Prot: sp|Q9ZRA4|AB19A_PRUPE Auxin-binding protein ABP19a; TrEMBL-Plants: tr|I3SM12|I3SM12_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0414900 | 20 | ||
– | Germin-like protein; TAIR: AT1G72610.1 germin-like protein 1; Swiss-Prot: sp|Q9ZRA4|AB19A_PRUPE Auxin-binding protein ABP19a; TrEMBL-Plants: tr|I3SQD4|I3SQD4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0415000 | 20 | ||
– | Germin-like protein; TAIR: AT3G62020.1 germin-like protein 10; Swiss-Prot: sp|Q652P9|GL93_ORYSJ Germin-like protein 9-3; TrEMBL-Plants: tr|K7LTV3|K7LTV3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0475900 | 18 | ||
– | 11S globulin seed storage protein 2; TAIR: AT1G07750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07730|GLUA2_ORYSJ Glutelin type-A 2; TrEMBL-Plants: tr|I1K4A8|I1K4A8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0388500 | 11 | ||
– | 11S globulin seed storage protein 2; TAIR: AT1G07750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07730|GLUA2_ORYSJ Glutelin type-A 2; TrEMBL-Plants: tr|A0A0B2PFU4|A0A0B2PFU4_GLYSO Glutelin type-A 2; Found in the gene: LotjaGi4g1v0388500 | 11 | ||
– | 11S globulin seed storage protein 2; TAIR: AT1G07750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07730|GLUA2_ORYSJ Glutelin type-A 2; TrEMBL-Plants: tr|A0A0B2PFU4|A0A0B2PFU4_GLYSO Glutelin type-A 2; Found in the gene: LotjaGi4g1v0388500 | 11 | ||
– | 11S globulin seed storage protein 2; TAIR: AT1G07750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07730|GLUA2_ORYSJ Glutelin type-A 2; TrEMBL-Plants: tr|A0A0B2PFU4|A0A0B2PFU4_GLYSO Glutelin type-A 2; Found in the gene: LotjaGi4g1v0388500 | 11 | ||
– | 11S globulin seed storage protein 2; TAIR: AT1G07750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|O23878|13S1_FAGES 13S globulin seed storage protein 1; TrEMBL-Plants: tr|A0A1J7HY90|A0A1J7HY90_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0388600_LC | 8 | ||
– | Germin-like protein; TAIR: AT3G10080.2 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9SR72|GL32_ARATH Germin-like protein subfamily 3 member 2; TrEMBL-Plants: tr|I3SA29|I3SA29_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0094900 | 20 | ||
– | Globulin-1; TAIR: AT3G22640.1 cupin family protein; Swiss-Prot: sp|Q04672|SBP_SOYBN Sucrose-binding protein; TrEMBL-Plants: tr|I1JF86|I1JF86_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0169800 | 14 | ||
– | Globulin-1; TAIR: AT3G22640.1 cupin family protein; Swiss-Prot: sp|Q04672|SBP_SOYBN Sucrose-binding protein; TrEMBL-Plants: tr|I1JF86|I1JF86_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0169800 | 15 | ||
– | Globulin-1; TAIR: AT3G22640.1 cupin family protein; Swiss-Prot: sp|Q04672|SBP_SOYBN Sucrose-binding protein; TrEMBL-Plants: tr|I1JF86|I1JF86_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0169800 | 14 | ||
– | 11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P02858|GLYG4_SOYBN Glycinin G4; TrEMBL-Plants: tr|B5U8K1|B5U8K1_LOTJA Legumin storage protein 2; Found in the gene: LotjaGi5g1v0181400 | 21 | ||
– | 11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P02858|GLYG4_SOYBN Glycinin G4; TrEMBL-Plants: tr|B5U8K2|B5U8K2_LOTJA Legumin storage protein 3; Found in the gene: LotjaGi5g1v0181600 | 21 | ||
– | Germin-like protein 1; TAIR: AT3G62020.1 germin-like protein 10; Swiss-Prot: sp|Q9M263|GL24_ARATH Germin-like protein subfamily 2 member 4; TrEMBL-Plants: tr|I3T820|I3T820_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0234900 | 20 | ||
– | Germin-like protein 1; TAIR: AT3G62020.1 germin-like protein 10; Swiss-Prot: sp|Q9M263|GL24_ARATH Germin-like protein subfamily 2 member 4; TrEMBL-Plants: tr|I3T5U1|I3T5U1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0236200 | 20 | ||
– | 7S globulin-1; TAIR: AT3G22640.1 cupin family protein; Swiss-Prot: sp|P13918|VCLC_PEA Vicilin; TrEMBL-Plants: tr|B5U8K8|B5U8K8_LOTJA Convicilin storage protein 2; Found in the gene: LotjaGi5g1v0312000 | 18 | ||
– | 7S globulin-1; TAIR: AT3G22640.1 cupin family protein; Swiss-Prot: sp|P11827|GLCAP_SOYBN Beta-conglycinin, alpha' chain; TrEMBL-Plants: tr|B5U8K3|B5U8K3_LOTJA Convicilin storage protein 1; Found in the gene: LotjaGi5g1v0312100 | 19 | ||
– | Germin-like protein; TAIR: AT3G10080.2 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9SR72|GL32_ARATH Germin-like protein subfamily 3 member 2; TrEMBL-Plants: tr|A0A151TQ40|A0A151TQ40_CAJCA Germin-like protein subfamily 3 member 2; Found in the gene: LotjaGi5g1v0345300 | 20 | ||
– | Germin-like protein; TAIR: AT3G10080.2 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q9SR72|GL32_ARATH Germin-like protein subfamily 3 member 2; TrEMBL-Plants: tr|A0A151TQ40|A0A151TQ40_CAJCA Germin-like protein subfamily 3 member 2; Found in the gene: LotjaGi5g1v0345300 | 20 | ||
– | Germin-like protein; TAIR: AT5G20630.1 germin 3; Swiss-Prot: sp|Q9ZRA4|AB19A_PRUPE Auxin-binding protein ABP19a; TrEMBL-Plants: tr|I3SX20|I3SX20_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0225500 | 18 | ||
– | Germin-like protein 1; TAIR: AT3G05950.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q6K5Q0|GL21_ORYSJ Putative germin-like protein 2-1; TrEMBL-Plants: tr|A0A151SB73|A0A151SB73_CAJCA Putative germin-like protein 2-1; Found in the gene: LotjaGi6g1v0268400 | 20 | ||
– | Germin-like protein 1; TAIR: AT3G05950.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q6K5Q0|GL21_ORYSJ Putative germin-like protein 2-1; TrEMBL-Plants: tr|A0A0L9VDZ2|A0A0L9VDZ2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0268600 | 20 | ||
– | Germin-like protein 1; TAIR: AT3G05950.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|Q6K5Q0|GL21_ORYSJ Putative germin-like protein 2-1; TrEMBL-Plants: tr|A0A0L9VDZ2|A0A0L9VDZ2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0268700 | 20 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
SignalP-noTM | SignalP_GRAM_NEGATIVE | 1 | 1.11 |