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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0368400 |
| Transcript ID | LotjaGi2g1v0368400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 11S globulin seed storage protein 2; TAIR: AT1G07750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07730|GLUA2_ORYSJ Glutelin type-A 2; TrEMBL-Plants: tr|A0A151TM61|A0A151TM61_CAJCA Glutelin type-A 1; Found in the gene: LotjaGi2g1v0368400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86587507..86589838) extracted from Lotus japonicus Gifu genome v1.2.
GAGAATTAGTAGCGGATCAGGACTCTATCACCGTGTTATGAAGTTAGAGTTAGAGACTTAGAGTGGGATTCATTCAAACT GTTTCCTATATATACACACCACACACATGCTCTGAAAAACTAAAAGAGTGTGAGAGAGATATTTGCTTTGGTCTTTGGTG TGATCTTTGCCTTTTAATTTGTTCCTTTAATTTGTTGTGATTGTTCCTTTGTTGTGATGGATATTGATCTTTCTCCCCAA TTGGCCAAGAAGGTGTATGGAGGCAATGGTGGATCTTATTATGCTTGGTCTCCTTCTGAACTTCCAATGTTGCGTGAAGG GAACATTGGTGCTGGAAAATTAGCTCTAGAGAAGAATGGTTTTGCCCTTCCTCGTTACTCTGATTCTTCCAAGGTTGCAT ATGTTCTGCAAGGTATACTTATATAACCTTTTACTCCTCTTGGCTCTTTTTGATATCTCAATTGCTTTCTTCGCTCCTTG TATGATGTAATAGACATTAAATTGATGTTCAACCGTTGGTTTGAAGGGCGTTTGAAAACTGTTGTGTGTGGATTTCATAT GAGAATTAGAATTAGTTTGTCTATCAATAGACCAACACTTTGTTTTCTTTCTTACCCATCATTGATCTTTAATGTTTTCT TTTCATATTATTAATGTGATTCCCTTTGATTCTTTGTCAAAATATTTTAATTCTAATAAAATTTCTTATTTATTTTGAGG GATCAACGAATCCAACTGCAATTTATGTTTCCAGTTATTAATATTATTGTAGTGATTGTGTATTGGTTATTCTGAATTAT GAATTTGTTAAAACAGGAAGTGGAGTTGCTGGGATTTTACTGCCTGAATCAGAAGAGAAGGTTATTGCAATTAAGAAGGG TGATGCTTTGGCACTCCCCTTCGGAGTTGTGACATGGTGGTTTAACAAGGAGGAACCAGAGTTGGTTGTTCTTTTCCTAG GAGACACTTCAAAAGGTCACAAGGCCGGTGAATTTACCGATTTTTTCCTAACCGGCTCTAACGGAATCTTCACCGGATTT TCAACCGAATTTGTGGGAAGAGCTTGGGACTTGGAAGAAAAAGATGTCAAAACCCTTGTTGGAAAACAAACAGGTAAGCA CGAACGAATGTAGGCGTATAAAAATCGTGAATGCTTTTAATAAATAAATTAGCATTTTAAAGCTTGTATTATTATCTTTT TCAATTAGTGATTCTTGAATTTTCTTAGTGTGTTGATTAATTTTTTTGCCAAATTTTACTTATCCTTTCAGGAAAGGGCA TTGTGAAGCTTGATGAAAACATCAACCTCCCTCAGCCAAAACAAGAACATAGGAAGGACATGGCATTGAACTGTTTAGAG GCTCCATTGGATGTTGACATTAAGAATGGTGGAAGGGTTGTGGTCTTGAACACTAAGAACCTTCCTTTGGTTGGCGAGGT TGGTCTTGGTGCAGATCTTGTGAGGCTTGATGGAAAAGCCATGTGTTCTCCAGGTTTCTCTTGTGACTCTGCTTTGCAGG TTACTTACATTGTCAGAGGAAGTGGTCGTGTTCAAGTTGTTGGTGTGGATGGTCGTAAGGTTTTGGAGACAACTTTGAAA GCTGGGAATTTGTTCATTGTGCCAAGGTTTTTTGTTGTTTCTAAGATTGGTGACCCTGAAGGAATGGAGTGGTTCTCCAT CATCACTACCCCTAAGTAAGTTTTTCTTCTTAACCTTTGTATATTTTTGTTGGGCCGAATTTTGTCATTCACTGTTGCTA TAAATTATTTTGCTTTAGCTAGTGAGTTATCAACACAATAAGAACTCGAGCTTATTTAGTGTATTTTCTAGTATATAGGC TCTAATAAGTTTCCATAAGTCTATATTTGATATGATTCTAACCAATGCTTACAATTGTTGTTATTTTCAGTCCTATATTT ACACACATGGCTGGGAGTTCTTCGGTGTGGAAGGCTTTATCACCCTCGGTTCTGCAAGCATCTTTCAATGTAGATGCAGG AGTTGAGCAACTATTTCGTTCAAAGAGGACTTCTGATGCTATCTTTTTCCCTCCTCCAAATTAAAGTTGAATAAAAGTTG CAGTACTTAGGCATAGAATTTTACATTTATCTAGCTAGTAGCAAATTTTGAATTAATTTTAGTTTTTTAGTTTAGTTTTC TTAAGATTTCTGCATTTGTTTTTCTTTTGGATTTACGAGGAGTTGATTATCTCAAATTTACTTAGATTGCCGGTCTTTTT TATATTCTTTCTGTTGTTGCTTCCAAATAGTTAGTTTTCTTGCTAACTGTTAAGTTACAATATGCACGATTAATCATTAA AATGAAACCTGA
CDS sequence (LotjaGi2g1v0368400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATATTGATCTTTCTCCCCAATTGGCCAAGAAGGTGTATGGAGGCAATGGTGGATCTTATTATGCTTGGTCTCCTTC TGAACTTCCAATGTTGCGTGAAGGGAACATTGGTGCTGGAAAATTAGCTCTAGAGAAGAATGGTTTTGCCCTTCCTCGTT ACTCTGATTCTTCCAAGGTTGCATATGTTCTGCAAGGAAGTGGAGTTGCTGGGATTTTACTGCCTGAATCAGAAGAGAAG GTTATTGCAATTAAGAAGGGTGATGCTTTGGCACTCCCCTTCGGAGTTGTGACATGGTGGTTTAACAAGGAGGAACCAGA GTTGGTTGTTCTTTTCCTAGGAGACACTTCAAAAGGTCACAAGGCCGGTGAATTTACCGATTTTTTCCTAACCGGCTCTA ACGGAATCTTCACCGGATTTTCAACCGAATTTGTGGGAAGAGCTTGGGACTTGGAAGAAAAAGATGTCAAAACCCTTGTT GGAAAACAAACAGGAAAGGGCATTGTGAAGCTTGATGAAAACATCAACCTCCCTCAGCCAAAACAAGAACATAGGAAGGA CATGGCATTGAACTGTTTAGAGGCTCCATTGGATGTTGACATTAAGAATGGTGGAAGGGTTGTGGTCTTGAACACTAAGA ACCTTCCTTTGGTTGGCGAGGTTGGTCTTGGTGCAGATCTTGTGAGGCTTGATGGAAAAGCCATGTGTTCTCCAGGTTTC TCTTGTGACTCTGCTTTGCAGGTTACTTACATTGTCAGAGGAAGTGGTCGTGTTCAAGTTGTTGGTGTGGATGGTCGTAA GGTTTTGGAGACAACTTTGAAAGCTGGGAATTTGTTCATTGTGCCAAGGTTTTTTGTTGTTTCTAAGATTGGTGACCCTG AAGGAATGGAGTGGTTCTCCATCATCACTACCCCTAATCCTATATTTACACACATGGCTGGGAGTTCTTCGGTGTGGAAG GCTTTATCACCCTCGGTTCTGCAAGCATCTTTCAATGTAGATGCAGGAGTTGAGCAACTATTTCGTTCAAAGAGGACTTC TGATGCTATCTTTTTCCCTCCTCCAAATTAA
Protein sequence (LotjaGi2g1v0368400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDIDLSPQLAKKVYGGNGGSYYAWSPSELPMLREGNIGAGKLALEKNGFALPRYSDSSKVAYVLQGSGVAGILLPESEEK VIAIKKGDALALPFGVVTWWFNKEEPELVVLFLGDTSKGHKAGEFTDFFLTGSNGIFTGFSTEFVGRAWDLEEKDVKTLV GKQTGKGIVKLDENINLPQPKQEHRKDMALNCLEAPLDVDIKNGGRVVVLNTKNLPLVGEVGLGADLVRLDGKAMCSPGF SCDSALQVTYIVRGSGRVQVVGVDGRKVLETTLKAGNLFIVPRFFVVSKIGDPEGMEWFSIITTPNPIFTHMAGSSSVWK ALSPSVLQASFNVDAGVEQLFRSKRTSDAIFFPPPN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 355 | 355 | 2.7E-221 | – | |
| PANTHER | 1 | 355 | 355 | 2.7E-221 | – | |
| Gene3D | 3 | 196 | 194 | 2.4E-32 | ||
| SMART | 3 | 157 | 155 | 3.6E-33 | ||
| Pfam | 11 | 156 | 146 | 2.9E-26 | ||
| SUPERFAMILY | 16 | 345 | 330 | 1.75E-48 | ||
| SMART | 195 | 339 | 145 | 7.1E-17 | ||
| Pfam | 196 | 335 | 140 | 5.0E-21 | ||
| Gene3D | 197 | 356 | 160 | 2.9E-32 | ||
| PRINTS | 211 | 231 | 21 | 9.8E-15 | ||
| PRINTS | 258 | 274 | 17 | 9.8E-15 | ||
| PRINTS | 276 | 291 | 16 | 9.8E-15 | ||
| PRINTS | 294 | 312 | 19 | 9.8E-15 | ||
| PRINTS | 316 | 333 | 18 | 9.8E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nutrient reservoir activity | Functions in the storage of nutritious substrates. |
Expression pattern of LotjaGi2g1v0368400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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