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IPR006044

Description

IPR006044 is a 11-S seed storage protein, plant.

<p>Plant seed storage proteins, whose principal function appears to be the major nitrogen source for the developing plant, can be classified, on the basis of their structure, into different families. 11S-type globulins are non-glycosylated proteins which form hexameric structures [[cite:PUB00001358], [cite:PUB00004572]]. Each of the subunits in the hexamer is itself composed of an acidic and a basic chain derived from a single precursor and linked by a disulphide bond. This structure is shown in the following representation.</p> <pre> +-------------------------+ | | xxxxxxxxxxxCxxxxxxxxxxxxxxxxxxxxxxNGxCxxxxxxxxxxxxxxxxxxxxxxx |------Acidic-subunit-------------||-----Basic-subunit------| |-----------------About-480-to-500-residues-----------------| 'C': conserved cysteine involved in a disulphide bond. </pre> <p>Members of the 11-S family include pea and broad bean legumins, oil seed rape cruciferin, rice glutelins, cotton beta-globulins, soybean glycinins, pumpkin 11-S globulin, oat globulin, sunflower helianthinin G3, etc. This family represents the precursor protein which is cleaved into the two chains. These proteins contain two β-barrel domains. This family is a member of the 'cupin' superfamily on the basis of their conserved barrel domain ('cupa' is the Latin term for a small barrel).</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Nutrient reservoir activity Functions in the storage of nutritious substrates.

Associated Lotus transcripts 24

Transcript Name Description Predicted domains Domain count
PREDICTED: glutelin type-A 1 [Vitis vinifera] gi|225435090|ref|XP_002284459.1| 10
PREDICTED: glutelin type-A 1-like [Glycine max] gi|356539076|ref|XP_003538026.1| 11
Glycinin subunit G7 [Glycine max] gi|76096944|gb|ABA39287.1| 20
Legumin storage protein 5 [Lotus japonicus] gi|206712292|emb|CAR78996.1| 23
Legumin storage protein 5 [Lotus japonicus] gi|206712292|emb|CAR78996.1| 14
Legumin storage protein 5 [Lotus japonicus] gi|206712292|emb|CAR78996.1| 26
11S seed storage globulin B [Chenopodium quinoa] gi|115343513|gb|ABI94736.1| 19
PREDICTED: glutelin type-A 2-like [Glycine max] gi|356512608|ref|XP_003525010.1| 11
PREDICTED: glutelin type-A 2-like [Glycine max] gi|356512608|ref|XP_003525010.1| 11
Glutelin type-A [Medicago truncatula] gi|357519369|ref|XP_003629973.1| 11
11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P11828|GLYG3_SOYBN Glycinin G3; TrEMBL-Plants: tr|B5U8K6|B5U8K6_LOTJA Legumin storage protein 5; Found in the gene: LotjaGi1g1v0709000 22
11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P11828|GLYG3_SOYBN Glycinin G3; TrEMBL-Plants: tr|B5U8K6|B5U8K6_LOTJA Legumin storage protein 5; Found in the gene: LotjaGi1g1v0709200 22
11S globulin seed storage protein; TAIR: AT1G03890.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P02858|GLYG4_SOYBN Glycinin G4; TrEMBL-Plants: tr|A0A072U489|A0A072U489_MEDTR Glycinin G4; Found in the gene: LotjaGi1g1v0709300 19
11S globulin seed storage protein 2; TAIR: AT1G07750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07730|GLUA2_ORYSJ Glutelin type-A 2; TrEMBL-Plants: tr|A0A151TM61|A0A151TM61_CAJCA Glutelin type-A 1; Found in the gene: LotjaGi2g1v0368400 11
11S seed storage protein; TAIR: AT2G28680.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07728|GLUA1_ORYSJ Glutelin type-A 1; TrEMBL-Plants: tr|I3SN90|I3SN90_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0279200 11
11S seed storage protein; TAIR: AT2G28680.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07728|GLUA1_ORYSJ Glutelin type-A 1; TrEMBL-Plants: tr|I3SN90|I3SN90_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0279300 11
11S seed storage globulin; TAIR: AT1G03890.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P05190|LEGB4_VICFA Legumin type B; TrEMBL-Plants: tr|B9SF37|B9SF37_RICCO Legumin A, putative; Found in the gene: LotjaGi3g1v0333500 18
11S globulin seed storage protein; TAIR: AT1G03890.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07728|GLUA1_ORYSJ Glutelin type-A 1; TrEMBL-Plants: tr|B9H8M5|B9H8M5_POPTR Legumin family protein; Found in the gene: LotjaGi3g1v0333700 11
11S globulin seed storage protein 2; TAIR: AT1G07750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07730|GLUA2_ORYSJ Glutelin type-A 2; TrEMBL-Plants: tr|I1K4A8|I1K4A8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0388500 11
11S globulin seed storage protein 2; TAIR: AT1G07750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07730|GLUA2_ORYSJ Glutelin type-A 2; TrEMBL-Plants: tr|A0A0B2PFU4|A0A0B2PFU4_GLYSO Glutelin type-A 2; Found in the gene: LotjaGi4g1v0388500 11
11S globulin seed storage protein 2; TAIR: AT1G07750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07730|GLUA2_ORYSJ Glutelin type-A 2; TrEMBL-Plants: tr|A0A0B2PFU4|A0A0B2PFU4_GLYSO Glutelin type-A 2; Found in the gene: LotjaGi4g1v0388500 11
11S globulin seed storage protein 2; TAIR: AT1G07750.1 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P07730|GLUA2_ORYSJ Glutelin type-A 2; TrEMBL-Plants: tr|A0A0B2PFU4|A0A0B2PFU4_GLYSO Glutelin type-A 2; Found in the gene: LotjaGi4g1v0388500 11
11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P02858|GLYG4_SOYBN Glycinin G4; TrEMBL-Plants: tr|B5U8K1|B5U8K1_LOTJA Legumin storage protein 2; Found in the gene: LotjaGi5g1v0181400 21
11S seed storage globulin; TAIR: AT5G44120.3 RmlC-like cupins superfamily protein; Swiss-Prot: sp|P02858|GLYG4_SOYBN Glycinin G4; TrEMBL-Plants: tr|B5U8K2|B5U8K2_LOTJA Legumin storage protein 3; Found in the gene: LotjaGi5g1v0181600 21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 4.17