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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0373000 |
| Transcript ID | LotjaGi2g1v0373000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT3G61600.2 POZ/BTB containin G-protein 1; Swiss-Prot: sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1; TrEMBL-Plants: tr|V7ANN5|V7ANN5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0373000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:86994683..86997716) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGTCTGAGTGGTCTGAATCCGATTTCGGCTTCGCTTTCAATAAGAGCAATTTCTCCGACAGGATTCTTCGAATTGA GATTATCACCGACCCCATTGTTGATGTCCCACCACCTCATTCAGATAGTGTCACCACCATTGATGACTGGACTCGCTACT GCGAGAGGAGACGCAAAAACGGTATTTTACTCTCCGTCTCTCTCGGTTCAATCTATTGGATTTTTTATGTTATTTTTCCT GTAGAGAAATTGGGCAGAGTTCTTGTGATTTCATTCATTTGCTTAGCTTGTTAATCCACATACACGTCTGCTTTGATCCT TCATTATTAAATAACAACAATAATCTTGTTTTGTTGATCATAAAGTTGTAACCTTTGTCACAAGTACATAAATCACTAGT ATTTGATAAAAGTGTGAAACCCAATTTGTAATAAGGTGCTTGCTGTGGTACCTTAAGCCAGATTAAGGTGTGTGGTACCC AAAATGAGTCGGTTCAACAATAAAGACTCATGTATCGGTTAAAATTTTGATTGTGTTCTATCGTAGTAATACAGCGTTCC ATTCTTAGGGACGTGAGATTTGAAAGTTGTGTTTTATGAGCTTTGTGCATCCATCAACCATGATCATTTTACACGCATCT CCATCACCATTATTCGTTTCCACCTCATACAATTTTTCATAAAAAAATGAATTTCATGAGATAAAGTTAATTGATAAGTA AAGTAAAATTTAAAGATGTTGTTTTTCCCTTGAATGACATGATAAAAATCTATAAAATTACTTAATGGGGTACCATACCC AAAAAAATTTGAGGGTACCACAGAATTTACCTTGTAATAAACCTGTTCTGTGCATGGACGGGTGTGTTTGTGTTTTCCTA AAGTGTGCTGCTTTGTGCATGTCACGATTGGTGAGAATTGCAAATGCTCCCCCTCCCCCCATCTGGAAAATAAATTACTA TTAATCCATGGTATAATTTAAACAAGAGTACAATTTATTTGAGATATCATCAGTGTGATACAAAATTAAGTGTAGCATAC TCTCCCTTCCCTTGTAGTGAGGAAACTGATAAGATCATGAACTTATCTGTTCTTTCTGCTCTATGAATACTATAGGTGAT GAAGCTGCAAACAGCAATGATTCAAACTGGATCATGGATTGCTCTACAGCTACATATTATAGAGTTAAAACACTGCATAT CAGTTCTCCTATTCTGGCTGCTAAAAGCCCTTTCTTCTATAAGCTTTTCTCAAATGGGATGAAGGAGTCAGAGCACAGAC ATGTCACCCTCAGGATTAATGCATCTGGTAACATTTTACATCCTTGCCTACTTATTATATGTTTGCCTCATCATTTTTTA TTTTCATCAAATAGCTAGTCACCATGTCATACTTCTCTTGTCTTTTGCATTGCAGAAGAAGCTGCTTTCATGGAGCTACT GAATTTTATGTACAGGAATACCTTGAATATCACTACACCAGCTGCTTTACTGGACCTGCTTATGGCTGCTGATAAATTTG AAGTCTCTTCATGCATGAGACACTGTAGGCGGTTACCCATGACACTTGACTTTGCATTATTTTGCGCGGAGCTTCCTATG GCTTATGCAGTCCAACCACTGACTGATGCTGCAAAGCAGTATCTTGCTAGCCGATTCAAGGATGTAACTAAGTAAGTGTT TGCATTTTATTTAATTTCTGTTGCATCCTCTTAAATTCAAGCACTACAAATTTGATGGTTTTTCTCCTCTATCAAGTGGT ATTTAATGATTCCTCTCCATCCTTCTAATAAGTTATTTCCATTATATTGCTCTTGTTTGAGACAAGAGAGACTTGAGGAA CGAATCATGGATTCAAAGAAGGGACTGATGTGTGTTTGTGTGTGTGTGTGTGCTGCATCTAATGTTTTAATCTTGGTCAC TTTTATTTTTCGTCAATCAACTTCATGTTACTTATAAACATTTGAGAGGATTTTTCTATTATGGCATTCCATGAAGTGTC ATTTGGAAAACATCACGTTATTGATTCTAATTGACCATTCTTTTGAAAAAGTGCCGTTTCTTTTGCTGCCATTCCTCATT GTTTTCATTTCAATGTTATCTTCCTTCTTTTAAAGTTAATATAATCTTTTATTTGACCAGGTTCGATGAAGAGTTCATGG CCTTGCCTCTTCATGGAATAGAGGCAATCTTGGCTAGTGATGATCTCAAGGTTCAATCAGAAGATGTGCTATGTGGCTTT GTAATAAAGTGGGCTAGAAAACATTACAATAGATTAAAAGAAAGGCGAGAAGTTCTGGGTACACAGCTTGCGCGTTTAAT TCGCTTCCCTTGTATGTCATTCATTGGGCTTAAGCAGGTCTTAACCGTTGATGACGTTGGACATAAGGATGTATCTAAGC TTGTAATTGAAGCCCTATCTTTCAAGTCGGGGTTACCGAAAGCTTCATTGTACTCTCCTTTTGTGGAGAGGGTATATACG TATCACCCTATCAAGGTGATAAAACTTGATATTCCCCGCCGACAACATAGTGTGGTGTACTGGGATCTGAAGCGGGAGGT GTGTGCCACTTTGTTACCATCTGGTCCCTTGGTGTGGTCTGAGAAATTCCGTTTCGGTGGACAACGGTATTTTTTAGTAG CAGAAAGCAACAAGGACACCCATTGCTTTGAGCTGTTTTTAGGAATGAGCAAAGGATCGGTAGGCTCTGCAAAGGTGAAC TGTAAATTTTCTGCAAGGTGTAGGCCAAGAGAGGAGTTTGTTGATATGAAGAAAGCCCGTGATACATTTACTGGGGGAAA GTTTATTGGTCATAGAAACTTGTTTAATATGCCATGGACTTCGTTCATGGCTGAGGATTGTAAATTCTTCATTAACGGTG TTCTCCACCTCAAAGTTAGCCTTTCCATAAGAGATTGATGATCCCCTAAAATTTCATCCAACTAGTGCTTGTTGCTTATG TGATAAAGAAGCTGTGCTCGAATGAAATGACACAAGCTTGTTTAGGAATACAGAAGGAAATAGGCAGGCTGAGC
CDS sequence (LotjaGi2g1v0373000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCTGAGTGGTCTGAATCCGATTTCGGCTTCGCTTTCAATAAGAGCAATTTCTCCGACAGGATTCTTCGAATTGA GATTATCACCGACCCCATTGTTGATGTCCCACCACCTCATTCAGATAGTGTCACCACCATTGATGACTGGACTCGCTACT GCGAGAGGAGACGCAAAAACGGTGATGAAGCTGCAAACAGCAATGATTCAAACTGGATCATGGATTGCTCTACAGCTACA TATTATAGAGTTAAAACACTGCATATCAGTTCTCCTATTCTGGCTGCTAAAAGCCCTTTCTTCTATAAGCTTTTCTCAAA TGGGATGAAGGAGTCAGAGCACAGACATGTCACCCTCAGGATTAATGCATCTGAAGAAGCTGCTTTCATGGAGCTACTGA ATTTTATGTACAGGAATACCTTGAATATCACTACACCAGCTGCTTTACTGGACCTGCTTATGGCTGCTGATAAATTTGAA GTCTCTTCATGCATGAGACACTGTAGGCGGTTACCCATGACACTTGACTTTGCATTATTTTGCGCGGAGCTTCCTATGGC TTATGCAGTCCAACCACTGACTGATGCTGCAAAGCAGTATCTTGCTAGCCGATTCAAGGATGTAACTAAGTTCGATGAAG AGTTCATGGCCTTGCCTCTTCATGGAATAGAGGCAATCTTGGCTAGTGATGATCTCAAGGTTCAATCAGAAGATGTGCTA TGTGGCTTTGTAATAAAGTGGGCTAGAAAACATTACAATAGATTAAAAGAAAGGCGAGAAGTTCTGGGTACACAGCTTGC GCGTTTAATTCGCTTCCCTTGTATGTCATTCATTGGGCTTAAGCAGGTCTTAACCGTTGATGACGTTGGACATAAGGATG TATCTAAGCTTGTAATTGAAGCCCTATCTTTCAAGTCGGGGTTACCGAAAGCTTCATTGTACTCTCCTTTTGTGGAGAGG GTATATACGTATCACCCTATCAAGGTGATAAAACTTGATATTCCCCGCCGACAACATAGTGTGGTGTACTGGGATCTGAA GCGGGAGGTGTGTGCCACTTTGTTACCATCTGGTCCCTTGGTGTGGTCTGAGAAATTCCGTTTCGGTGGACAACGGTATT TTTTAGTAGCAGAAAGCAACAAGGACACCCATTGCTTTGAGCTGTTTTTAGGAATGAGCAAAGGATCGGTAGGCTCTGCA AAGGTGAACTGTAAATTTTCTGCAAGGTGTAGGCCAAGAGAGGAGTTTGTTGATATGAAGAAAGCCCGTGATACATTTAC TGGGGGAAAGTTTATTGGTCATAGAAACTTGTTTAATATGCCATGGACTTCGTTCATGGCTGAGGATTGTAAATTCTTCA TTAACGGTGTTCTCCACCTCAAAGTTAGCCTTTCCATAAGAGATTGA
Protein sequence (LotjaGi2g1v0373000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESEWSESDFGFAFNKSNFSDRILRIEIITDPIVDVPPPHSDSVTTIDDWTRYCERRRKNGDEAANSNDSNWIMDCSTAT YYRVKTLHISSPILAAKSPFFYKLFSNGMKESEHRHVTLRINASEEAAFMELLNFMYRNTLNITTPAALLDLLMAADKFE VSSCMRHCRRLPMTLDFALFCAELPMAYAVQPLTDAAKQYLASRFKDVTKFDEEFMALPLHGIEAILASDDLKVQSEDVL CGFVIKWARKHYNRLKERREVLGTQLARLIRFPCMSFIGLKQVLTVDDVGHKDVSKLVIEALSFKSGLPKASLYSPFVER VYTYHPIKVIKLDIPRRQHSVVYWDLKREVCATLLPSGPLVWSEKFRFGGQRYFLVAESNKDTHCFELFLGMSKGSVGSA KVNCKFSARCRPREEFVDMKKARDTFTGGKFIGHRNLFNMPWTSFMAEDCKFFINGVLHLKVSLSIRD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 467 | 464 | 1.2E-179 | – | |
| SMART | 20 | 176 | 157 | 9.0E-8 | ||
| Gene3D | 63 | 175 | 113 | 1.6E-15 | – | |
| ProSiteProfiles | 76 | 145 | 70 | 13.364 | ||
| Pfam | 85 | 170 | 86 | 4.9E-15 | ||
| CDD | 85 | 144 | 60 | 1.01043E-10 | – | |
| SUPERFAMILY | 86 | 170 | 85 | 9.42E-14 | ||
| Gene3D | 176 | 298 | 123 | 4.0E-15 | – | |
| SMART | 181 | 285 | 105 | 6.5E-12 | ||
| Pfam | 186 | 282 | 97 | 7.1E-13 | ||
| CDD | 191 | 276 | 86 | 6.96276E-12 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0373000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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