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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0379200 |
| Transcript ID | LotjaGi2g1v0379200.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuolar protein sorting-associated protein 35; TAIR: AT1G75850.1 VPS35 homolog B; Swiss-Prot: sp|F4I0P8|VP35B_ARATH Vacuolar protein sorting-associated protein 35B; TrEMBL-Plants: tr|A0A151THW0|A0A151THW0_CAJCA Vacuolar protein sorting-associated protein 35; Found in the gene: LotjaGi2g1v0379200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87611131..87619185) extracted from Lotus japonicus Gifu genome v1.2.
ATGCTAGACGGAACCGAAGACGAAGAGAAGTTCCTCGCCGCCGGAATCGCCGGCCTCCAACAGAATTCCTTCTACATGCA CCGTGCATTGGTAACTCCTCCTCCCTCCCTTAAACCCTAACCTCTCCGCGCACCGCGATCACACACGAATTTCAGATTCG AATTTTCCTAATTCATTTGGATCCAATTGATTTTGTTGATTCGTCTCAGGACTCGAACAATCTCAGAGATGCGTTGAAGT ATTCGGCTCAGATGCTTTCCGAGCTCAGAACTTCCAAGCTCTCTCCTCACAAGTACTACGAACTCTGTCAGTTCCTCTCT CAGATCCATGTCTTGTTCTATTTCCTTTCATTTGTATGGATCCTGGAACTGTTTTTCGTGATTGAAACCCTTGTGATTGT TAATTTGCATGTTTTTGTTTCTCTTATTGCTATTGTTGTAGATATGCGTGCCTTTGATCAATTAAGGAAGCTCGAGATGT TCTTCGAGGAAGAGGCTCGTCGCGGTTGCTCCATTATTGATCTTTATGAACTTGTCCAGCATGCTGGAAACATTTTGCCT CGATTGTAAGTGACGGTTTATCTTGTTCATCTTGTTCGTCGATTATAAAACTGTTCATGATAGGTAACTAGTCCTGAATG TTCTATTATAGATGAATTAATATTATTTGTCACAATGGTGAAAAGAAGTTTCTATGTTAGCATAGCGGAGCGGTTATGTA TCTGTAATGCTTTTTTGATCATAGATTTTGTTTGAATGTGGTGCAATGCGCAATTATCCTGATACTTAATATGATATCAA CTGATGGTGCATCACTGAGATTGATGCTTCATCTCGGTGCATGGTGAAAATCACTTAGCTTGCTTGGAAACCAGTCCAAT CCTGGCCAACTTTCGTTACGGATGCCTTTACACTTGTTGAAGCTCAGAACTGAGAAGGGCATACTTTCAAAGTTGCAGTG ATTATTTTTTGGCATTTAATGTACTACTCACGAGCTGATGATTTTATGATCATGATCAGGTATCTCCTCTGTACAGTAGG ATCTGTATACATAAAATCCAAGGAAGCTCCTGCTAAGGATGTTCTTAAGGATCTTGTAGAGATGTGTCGTGGCATTCAGC ACCCTGTTCGCGGACTCTTTCTCAGAAGTTACCTTTCTCAAGTTAGTAGAGATAAATTGCCAGATATTGGTTCTGAATAT GAAGGGTAAGCAATATTCAAGCAAGACTTTTCACCATTCACTCTTTTCATGGACAGTATTATTTCTCTCTGAGGTCTCTT AAGTCTTAACTGAGCCAGATGTGAAGTTTCAATGAACAAAGTCAATAGTACTGAACATTTGGTGCGTAATTGCTGCGCCC TTTGGCAACGCCGTTTATTTTAACTCTATCAGTAGTAGTACCACCAGCCTAATCTCAAGGCATTTGATGCATGATATAAA CCCAGTGGAGTCATCTGAATATTAGATCATCCCTCTTTGTTAGATTTGTAGGATACTATACACTCGAGTACACAGTACGC TCATACATTAGCATATGCTAATACTCTTTTTTCTTTTCTTTTCTTTTCTTTTTAAATAGTTTATTTTATTGTTTTGTCTT TCAAGTTTAATTTTCTTCAGTCTCTCTAATTCACTCTGCGATTTCTGTATTTGTCCTGATTATGGGGCAGTAGCATTGAT TTTAATGCTGAACCAATGAGATTGAATTTGAACCTGATATGTGAGTGCCAACTCTGACAACTGCAGGGATGCAGATACTG TAGCAGATGCTGTAGAGTTTGTACTCCAAAACTTCACAGAAATGAACAAACTTTGGGTGCGGATGCAACATCAGGTTGGT CGAATTGTTTGCATATTGTTACAGCTCATGTTTGGTTATGCATGTCTGTCACAATAGTTGCAAGTCATGAGGGTAAAATA CATCATGAGGGCATGATTTCTGGTCATGCAGGTCAGGTGTAGTAATGCATGTCAATAATTCATTCTCTTAGCTGACTCTG AGTTGAGGCTTGCTGTCGGGCTTTATGGTCTGCAGGGGCCTGCCCGGGAGAAGGAGAAACGGGAAAAGGAAAGGAGCGAG CTGCGCGATCTTGTAATACCCGAAGCTTGTAACTGGTTATCTTCACTGTAATGGCATTGAATACATGATCAAATGCTTAT AGAAGGCTTCTCTTGCTTTTTTATCCTTGATACATTATTAGGTTGGGAAGAATCTCCATGTTCTCAGTCAGATAGAGGGT GTTGACCTTGAGATGTACAAAGATGTTGTGCTTCCTAGAGTGCTGGAGCAGGTCTAATCTGTTGTTACTGCTATTTATAT TTATGATCATCAAAGACATGTTTTACTTTCTTACCAGAAAAACCATTCCTCTTCTCAATTATTTTGTACAGGTTGTGAAT TGCAAAGATGAGTTGGCCCAGTTCTACTTGATGGATTGCATAATCCAAGTCTTCCCTGATGAGTATCACTTGCAAACTCT TGATGTATTGTTGGGTGCTTATCCTCAGCTTCAGGTTAGTGATCTTGTACTTGTTGGTGTCACTTCTGTAGGACGCCATG GTGTATATATGTTTTTCCTCCTTCCAAAACGCAAAGATTTTATTCAGTAGAGAGGGTTGTGAAAAAACACCAAGGAATAT GACAAGATATCTGCAAAAGTTTTTATCGACTATAATACCTTTAAAGGTAGAACTTGGGGAGGGGCTCCATTTGACATCTC CAAAATTTACCTAAAGAGTCTTATTTTCTGTTGAAATTTGCATTAAATAAATAAAAAGGCTGTGTTCCTCCATATGCAAC AGATGCAACCCAGCTTAACCATATTTGCTGCATTTATTTGCAGATAGTTTTAGAGTCAAGAGTCAACAGATGCGTATTAT TTGAAAATTTTATGCTGCAAATCTTGTAGGTATCACTCATTTGCTTTCTGTCTATTTTTGTCACTGTATTTTCCAGGCAT CTGTTGACATCAAGACAGTGTTATCCCAGTTAATGGAAAGACTTTCTAATTATGCTGCTTCAAGTGCTGAGGTGTTGCCT GAGTTTTTGCAAGTGGAAGCATTTTCCAAATTAAGCAGTGCCATTGGCAAGGTATTTTTTTTTGTTTGATAAATCTTGGA TATCGTAGTCATGTAGTGAGTATGTAGTTCTATGCTGCTTGCTGCCTAAAAAAGCAAGTAGCTGCCAGCCTGCCACTGTT TATGGAGTTTTGCAACCATCCAACTTAAACAAAGACTGACCAGAGGCTATTGATAGACTTTCTAGAAAGTAGTAACTAAG TTTTATCTCCCTATGTCATGGAGAGGCAAATAGCAAAGTGCTAATTGATACCATCTCACTTGTTCATCATATCTTTTAAT GATCTGATACTAACAGCAAAGAACTAACTTAGTACCTTATTAAAGGGAGCAAATCATGATAATTTCAGATAGTATAATGC TAAGGTGAGACCGTGATATATTTTTTAAATGGTCTAACAGTATGTTCTGTCATCTCTCTCGTGCATATTTGGGGTTATGT CCCATTTTAAGGGTGGTCAAATATAGTTAATGTTGATTTCTCCTTTTTCTTTTTTCACCCTGTTTATCTTTAAATATTTC TTTCATAATTCATCACTTCCGCGTTGGATTGCAAAGCATAATTTTTTCGTTTTCATTTTCCATTTGAATATTGAAATTGT GTTCTCCTTCATTCATACTTCTGATTTGGATGCTCTTGAACAGAAAACTGTAATTTTTATAACATTATTGTTTTTCTATG TTATGCTCATGGATTTGAAATATGTGCTCATCAATTGTTATACAGGTGATAGAGGCACATCCTGACATGCTCACTTTTGG TGTTGTAACTTTATATTCATCTCTTCTCACTTTCACTCTTCATGTCCACCCTGATCGACTTGATTATGCAGATCAAGTCT TGGTATGTTTCACTTTGAACGGCTTGTGCACATTCATGTTAACTTATTGATTCCAAGGTTATCAAATCTTGATTCAAATC ATTTTTGGTTAAGCTAATTTTTTTAATCATTTATCAAGCAAGTGCCACTGACATTGTTTTATTTCCTTAACTTTCACATC CTGTGCTTTCAGAGAAGGAAATACGCAATTTGGTAGAATATTATTCGTCACATATAATGGCTATTGCATTTAATGAATGT ATATATGATTGAAATGAGGGATTTTAGCAAGCTGCTCCAACATTTTTTATTATCAGATGAAATTCATGCGGTCCCATTCT CTACTTAGTGGATCCCCAAGAATTTCACCCACAATAATAAAGAGTATTGAAAAGTGTGTTGCAAGCATTTCTCATATGAT TGAATTCCTAGCAACCATGGTTCTTTTTATATGAGGAAGTGAACTTATTCCTAGATTTTCTTATAGGGAGCATGTGTGAA AAATCTCTCTGGCAAAGGGAAAATTGAGGACAACAAGGCAACTAAGCAAATTGTTGCTTTATTAAGTGCTCCACTAGAGA AATATAATGATATTATGACTGCCTTGAAGCTTTCAAACTATCCTCGTGTGATGGAATACCTTGATGTTCCAACTAATAAG GTCATGGCAGCTGTTATCATTCAAAGCATTATGAAAAATGGGACACACATATCTACTTCAGACAAGGTTTGTGTTATACT ACTTTCTGGCTTGCTTTTTGGTGAGAGTTTATTATTAACATAGCTTGGTTTATTGTAGGTTGAAGCATTGTTTGAACTTA TAAAGGGGCTTATTAAGGATTCTGATGGGACTCCTAATGACGAGGTTATTTCAGTACCTCAACTAGTCCTATTAGGCTAT TGTTTACAATGCCTATTATTTTGACATCTCTCATTACATATCACCTTTTATAATGAAATGCTTTTATGTTCTAATAAAAT AAAAATAAGATTATCCTTATTTTGTTTTCCTTTCTCTCCCTGCATTCTTATTTTACTTTTTCTTCCCCCTTTAGCTGGAT GAAGATGATTTCAAAGAAGAGCAGAATTCTGTTTCCCGTCTAATCCAGATGCTTTATAATGACGATCCAGAAGAGATGTT TAAGGTGAATTGCTAATATCCATTAGTTTCGATAGTTATTAAAAAATTACAATATACTTTTTTTGTCCTGCTGGAACTTC TCTCTGTTAAACTCCCGCTAATAGTTTCAGCTGACGCCACTTTTTACTTACTGGCACTTCTGTTGTGGTGGTGCACATGG ATTTAATCCTGTCATATTTAAAAATAAATCTATTTGAAGCTCTAAAATGGATTTAGGGTTATCTTAGGTTTAACCGCCAT AACATTTTATGTAGATTGTATCTGGTCTGGTCAAGGGCTGAGAAGCTAGAGTATGAATGCTTATCTGTGATTTTAATGTT TTTAACTTCAGTGAAATGATGTTTGATATGTTGCTTGTGACTGCAAACTATATTGTTTACCCTCTATTTGGGGAAAGGGG GCTTTGTTGTATATTACAAGTTCGAATTTTATTTTAATTTTGGCCACAATTGCCATCACTACATTGCAGATTATAGATAC TGTGAGGAAGCATGTACTGACTGGAGGATCAAAGCGTCTGCCTTTCACTATTCCACCTCTTGTTTTTTCTTCTTTAAAGG TTTGGTTGGCCATTTTGATAGTTGCCTGCTTATATTGTTCACAATTGTACCTTGTTTGTTGCTTACATCATGATGAATTA ATAATGCTGGCGGCAATAGCATATGTTGGAGACTACATCAATTTATCATTTTGACTTAGTTTTAATATTGAGAGAAGGTT GATTGAAATATTCCATTGACTTTCTTAGATCATAATTTATTAGGATTAATGGTTTAATAACATTAAGGCTTCTGATTCCT TCCTAGAAGCTTGTCTAGATAGTTGCTTTGCTGTCTCCTGGACAACTTCACTAAATGAGGCAACTGGGTTAGGACTTAGG AAGTTGCGAGTTTCCATTATCAAATAAATATTTAGTTTGTCTTTCCATTTCCAGTTGGCAGTAATCCCATTGCCCATTCA GATGAAGTGATGCAATGAGCCAGTATTTCTAAATCAAGCCAACATGCTAATACTATTTCGTTTTTTTTTGTGCTTTTGTT TCTTGTGTCCATGTTTTTATTGATTGAAATGAAAATGACTGTCTGTAACTCCTGCTGTTTGTTTTTACTTATAAAACCAA ATACAATCATTTATGCACTATGTACTTTACCATATACAGTTGGTCAGACAGTTGCAAGGTCAGGATGAAAATCCCTTTGG AGATGATGTAGCAACAACACCGAAGAAAATCTTTCAGCTTTTAAATCAGGTGATGGTTTTTCTATGAAAGGACTTTGGTT TTTTTTTTTGTTTCAATGGTGTTTTATGCCAGCCTAATTTTGTTTAAGTAGTGATTGATTATTAAGAATACTGAGGATTT GAAAAGATTTGGTTGCAGATTATGTGCAATTAATTGGTTAATTTGTTTGGTTATGCTTTTGTCTTTCCTTTCTCAGACCA TTGAGAGACTGTCAGGTGTCCTAGCACCAGAATTAGCATTGCAGTTGTACTTGCAATGTGCTGAGGTACTGGCCTATATT TGGTTGTTAGCACATGAAAATGATATTTCCTAACTATGTTTTCTGATTCCCTTGTTTCTTTTCTTCCATTAAGGCTGCAA ATGACTGTGATTTGGAACCAGTAGCATATGAATTTTTCACCCAAGCTTATATTCTATATGAAGAAGAAATTTCGGTAAGT CTTTTATAAGCCTACTAGTTCTGCTCCCCCCCCCCCCCCCCGGAAGATTTTTTTTTGCTGGGATCGGGGATAAGTTTGGA GCAGGAATCTTAACCTTGATAAAATTTATGGGTCTGATCTGCTCATGCATTTGTATTGTTATACTAGGATTCCAGAGCAC AGATCACAGCTATCCATTTAATAATAGGAACTCTTCAAAGGATGCATGTATTTGGTGTGGAGAACAGGGATACTTTAACT CACAAGGCCACAGGGGTAATTGCTGAATTCCATATTCTGCTTAGTGGCTAATGTATATTTTTCTACTAAATCCTCATTCT TGGTGCCTTTTCGTTGGACAGTATTCAGCAAAGCTTTTAAAGAAGCCAGATCAATGCAGAGCCGTGTATGCATGCTCACA TCTGTTTTGGGTTGATGATCATGATAACATGAAAGATGGAGAGAGGTTTGTTTCTATTTATATGACGCAAGAAGGTCTAA GACTTCTGCGGAATGTTGCATTACTGTGTTTGTATATTTGCTTTGGGCTTTTCCTATGTTACTGTTTAGTTGGACATAAA TAGTTTTAGAAGAATTCTAATTCTTTGCATGTCTAAAATAATCCTGCTGTTGACTATTTCTGTTCCATTTTGACAACAAA ATAGAACTATGCCATACTTGTGTAGTTGAAGGAGGAGAGTAAGCATGATTCTATCCAACCCTGCCATCCCTGAAGGGAGT GAGCATATTTATTCTTGACTGCGGAGTATGATAATAAGTTGGAAAAGAAGGGATGTAGGGTGTCTCATAAAGTTCAAAAA TGAATATAGGAATTTATTTGTTAGTTATTAACTTATTATGACTTATTGTTTTCGTTGTTATATTGATATTTATTTTTGAA CCAGAGTCCTATTGTGTCTCAAGCGGGCTTTAAGAATTGCAAATGCTGCACAACAAATGACAAATGCAGCACGAGGTAGC ACCGGATCAGTGATGCTTTTCATTGAGATATTGAACAAGTAAGATTAAAATCCTTTTGTCAACAAAAATCCATAATCTTA AGTCCATTGTTTTTCTTTGCTTCTCAACTTAGTTAAATGGAATAATGACGTTGTGTGCTTTTTGCAAGGTATCTTTACTT CTTTGAGAAGGGGAACCCACAAATCACACTTGCTGATATCCAGGGCCTAATTGAGTTAATTATGAATGAAATGCAAAGTG ACACCACAACTCCAGATCCAGCTGCGGATGCTTTCTTAGCCAGTACCATGCGATTTATACAGTTCCAGAAACAAAAAGGC GGTACAGTAGGTGAGAAGTATGAACCTATCAAGGTTTGACCTGCTAGATGATTGA
CDS sequence (LotjaGi2g1v0379200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTAGACGGAACCGAAGACGAAGAGAAGTTCCTCGCCGCCGGAATCGCCGGCCTCCAACAGAATTCCTTCTACATGCA CCGTGCATTGGACTCGAACAATCTCAGAGATGCGTTGAAGTATTCGGCTCAGATGCTTTCCGAGCTCAGAACTTCCAAGC TCTCTCCTCACAAGTACTACGAACTCTATATGCGTGCCTTTGATCAATTAAGGAAGCTCGAGATGTTCTTCGAGGAAGAG GCTCGTCGCGGTTGCTCCATTATTGATCTTTATGAACTTGTCCAGCATGCTGGAAACATTTTGCCTCGATTGTATCTCCT CTGTACAGTAGGATCTGTATACATAAAATCCAAGGAAGCTCCTGCTAAGGATGTTCTTAAGGATCTTGTAGAGATGTGTC GTGGCATTCAGCACCCTGTTCGCGGACTCTTTCTCAGAAGTTACCTTTCTCAAGTTAGTAGAGATAAATTGCCAGATATT GGTTCTGAATATGAAGGGGATGCAGATACTGTAGCAGATGCTGTAGAGTTTGTACTCCAAAACTTCACAGAAATGAACAA ACTTTGGGTGCGGATGCAACATCAGGGGCCTGCCCGGGAGAAGGAGAAACGGGAAAAGGAAAGGAGCGAGCTGCGCGATC TTGTTGGGAAGAATCTCCATGTTCTCAGTCAGATAGAGGGTGTTGACCTTGAGATGTACAAAGATGTTGTGCTTCCTAGA GTGCTGGAGCAGGTTGTGAATTGCAAAGATGAGTTGGCCCAGTTCTACTTGATGGATTGCATAATCCAAGTCTTCCCTGA TGAGTATCACTTGCAAACTCTTGATGTATTGTTGGGTGCTTATCCTCAGCTTCAGGCATCTGTTGACATCAAGACAGTGT TATCCCAGTTAATGGAAAGACTTTCTAATTATGCTGCTTCAAGTGCTGAGGTGTTGCCTGAGTTTTTGCAAGTGGAAGCA TTTTCCAAATTAAGCAGTGCCATTGGCAAGGTGATAGAGGCACATCCTGACATGCTCACTTTTGGTGTTGTAACTTTATA TTCATCTCTTCTCACTTTCACTCTTCATGTCCACCCTGATCGACTTGATTATGCAGATCAAGTCTTGGGAGCATGTGTGA AAAATCTCTCTGGCAAAGGGAAAATTGAGGACAACAAGGCAACTAAGCAAATTGTTGCTTTATTAAGTGCTCCACTAGAG AAATATAATGATATTATGACTGCCTTGAAGCTTTCAAACTATCCTCGTGTGATGGAATACCTTGATGTTCCAACTAATAA GGTCATGGCAGCTGTTATCATTCAAAGCATTATGAAAAATGGGACACACATATCTACTTCAGACAAGGTTGAAGCATTGT TTGAACTTATAAAGGGGCTTATTAAGGATTCTGATGGGACTCCTAATGACGAGCTGGATGAAGATGATTTCAAAGAAGAG CAGAATTCTGTTTCCCGTCTAATCCAGATGCTTTATAATGACGATCCAGAAGAGATGTTTAAGATTATAGATACTGTGAG GAAGCATGTACTGACTGGAGGATCAAAGCGTCTGCCTTTCACTATTCCACCTCTTGTTTTTTCTTCTTTAAAGTTGGTCA GACAGTTGCAAGGTCAGGATGAAAATCCCTTTGGAGATGATGTAGCAACAACACCGAAGAAAATCTTTCAGCTTTTAAAT CAGACCATTGAGAGACTGTCAGGTGTCCTAGCACCAGAATTAGCATTGCAGTTGTACTTGCAATGTGCTGAGTATTCAGC AAAGCTTTTAAAGAAGCCAGATCAATGCAGAGCCGTGTATGCATGCTCACATCTGTTTTGGGTTGATGATCATGATAACA TGAAAGATGGAGAGAGAGTCCTATTGTGTCTCAAGCGGGCTTTAAGAATTGCAAATGCTGCACAACAAATGACAAATGCA GCACGAGGTAGCACCGGATCAGTGATGCTTTTCATTGAGATATTGAACAAGTATCTTTACTTCTTTGAGAAGGGGAACCC ACAAATCACACTTGCTGATATCCAGGGCCTAATTGAGTTAATTATGAATGAAATGCAAAGTGACACCACAACTCCAGATC CAGCTGCGGATGCTTTCTTAGCCAGTACCATGCGATTTATACAGTTCCAGAAACAAAAAGGCGGTACAGTAGGTGAGAAG TATGAACCTATCAAGGTTTGA
Protein sequence (LotjaGi2g1v0379200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKYYELYMRAFDQLRKLEMFFEEE ARRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDI GSEYEGDADTVADAVEFVLQNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLEMYKDVVLPR VLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQASVDIKTVLSQLMERLSNYAASSAEVLPEFLQVEA FSKLSSAIGKVIEAHPDMLTFGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVKNLSGKGKIEDNKATKQIVALLSAPLE KYNDIMTALKLSNYPRVMEYLDVPTNKVMAAVIIQSIMKNGTHISTSDKVEALFELIKGLIKDSDGTPNDELDEDDFKEE QNSVSRLIQMLYNDDPEEMFKIIDTVRKHVLTGGSKRLPFTIPPLVFSSLKLVRQLQGQDENPFGDDVATTPKKIFQLLN QTIERLSGVLAPELALQLYLQCAEYSAKLLKKPDQCRAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMTNA ARGSTGSVMLFIEILNKYLYFFEKGNPQITLADIQGLIELIMNEMQSDTTTPDPAADAFLASTMRFIQFQKQKGGTVGEK YEPIKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 584 | 584 | 0.0 | – | |
| PANTHER | 1 | 584 | 584 | 0.0 | ||
| PIRSF | 1 | 586 | 586 | 7.0E-211 | ||
| Pfam | 12 | 584 | 573 | 1.0E-211 | ||
| SUPERFAMILY | 212 | 628 | 417 | 1.77E-6 | ||
| Gene3D | 476 | 584 | 109 | 8.0E-26 | ||
| Pfam | 578 | 683 | 106 | 4.3E-34 | ||
| PIRSF | 581 | 726 | 146 | 1.0E-41 | ||
| PANTHER | 584 | 726 | 143 | 0.0 | ||
| PANTHER | 584 | 726 | 143 | 0.0 | – | |
| Gene3D | 585 | 710 | 126 | 6.5E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein transport | The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Retromer, cargo-selective complex | The trimeric subcomplex of the retromer, believed to be closely associated with the membrane. This trimeric complex is responsible for recognizing and binding to cargo molecules. The complex comprises three Vps proteins in both yeast and mammalian cells: Vps35p, Vps29p, and Vps26p in yeast, and VPS35, VPS29 and VPS26A or VPS26B in mammals. | ||
| Biological process | Retrograde transport, endosome to Golgi | The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport. |
Expression pattern of LotjaGi2g1v0379200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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