Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PF03635

Source: Pfam

Description

Vacuolar protein sorting-associated protein 35

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0015031
Biological process Protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Subterm of
GO:0030906
Cellular component Retromer, cargo-selective complex The trimeric subcomplex of the retromer, believed to be closely associated with the membrane. This trimeric complex is responsible for recognizing and binding to cargo molecules. The complex comprises three Vps proteins in both yeast and mammalian cells: Vps35p, Vps29p, and Vps26p in yeast, and VPS35, VPS29 and VPS26A or VPS26B in mammals.
Subterm of
Part of
GO:0042147
Biological process Retrograde transport, endosome to Golgi The directed movement of membrane-bounded vesicles from endosomes back to the trans-Golgi network where they are recycled for further rounds of transport.
Subterm of

Associated Lotus transcripts 16

Transcript Name Description Predicted domains Domain count
Lj2g3v1670980.1
– PREDICTED: vacuolar protein sorting-associated protein 35-like [Glycine max] gi|356496620|ref|XP_003517164.1|
Domains
7
Lj2g3v3188430.1
– PREDICTED: UPF0505 protein C16orf62-like [Glycine max] gi|356553555|ref|XP_003545120.1|
Domains
5
Lj2g3v3188430.2
– PREDICTED: UPF0505 protein C16orf62-like [Glycine max] gi|356553555|ref|XP_003545120.1|
Domains
6
Lj5g3v0240210.1
– PREDICTED: vacuolar protein sorting-associated protein 35-like [Glycine max] gi|356564375|ref|XP_003550430.1|
Domains
10
Lj5g3v0240210.2
– PREDICTED: vacuolar protein sorting-associated protein 35-like [Glycine max] gi|356564375|ref|XP_003550430.1|
Domains
10
Lj5g3v0240220.1
– PREDICTED: vacuolar protein sorting-associated protein 35-like [Glycine max] gi|356553365|ref|XP_003545027.1|
Domains
4
LotjaGi1g1v0026000.1
– UPF0505 protein C16orf62; TAIR: AT1G50730.3 hypothetical protein; Swiss-Prot: sp|Q7Z3J2|CP062_HUMAN UPF0505 protein C16orf62; TrEMBL-Plants: tr|A0A0B2PS74|A0A0B2PS74_GLYSO UPF0505 protein C16orf62; Found in the gene: LotjaGi1g1v0026000
Domains
5
LotjaGi2g1v0379200.1
– Vacuolar protein sorting-associated protein 35; TAIR: AT2G17790.1 vacuolar protein sorting-associated 35A-like protein; Swiss-Prot: sp|Q7X659|VP35A_ARATH Vacuolar protein sorting-associated protein 35A; TrEMBL-Plants: tr|A0A0L9TD44|A0A0L9TD44_PHAAN Vacuolar protein sorting-associated protein 35; Found in the gene: LotjaGi2g1v0379200
Domains
9
LotjaGi2g1v0379200.2
– Vacuolar protein sorting-associated protein 35; TAIR: AT1G75850.1 VPS35 homolog B; Swiss-Prot: sp|F4I0P8|VP35B_ARATH Vacuolar protein sorting-associated protein 35B; TrEMBL-Plants: tr|A0A151THW0|A0A151THW0_CAJCA Vacuolar protein sorting-associated protein 35; Found in the gene: LotjaGi2g1v0379200
Domains
9
LotjaGi2g1v0379200.3
– Vacuolar protein sorting-associated protein 35; TAIR: AT1G75850.1 VPS35 homolog B; Swiss-Prot: sp|F4I0P8|VP35B_ARATH Vacuolar protein sorting-associated protein 35B; TrEMBL-Plants: tr|A0A0L9TD44|A0A0L9TD44_PHAAN Vacuolar protein sorting-associated protein 35; Found in the gene: LotjaGi2g1v0379200
Domains
9
LotjaGi2g1v0379200.4
– Vacuolar protein sorting-associated protein 35; TAIR: AT2G17790.1 vacuolar protein sorting-associated 35A-like protein; Swiss-Prot: sp|Q7X659|VP35A_ARATH Vacuolar protein sorting-associated protein 35A; TrEMBL-Plants: tr|A0A0L9TD44|A0A0L9TD44_PHAAN Vacuolar protein sorting-associated protein 35; Found in the gene: LotjaGi2g1v0379200
Domains
9
LotjaGi5g1v0004500.1
– Vacuolar protein sorting-associated protein 35; TAIR: AT1G75850.1 VPS35 homolog B; Swiss-Prot: sp|F4I0P8|VP35B_ARATH Vacuolar protein sorting-associated protein 35B; TrEMBL-Plants: tr|V7CTH6|V7CTH6_PHAVU Vacuolar protein sorting-associated protein 35; Found in the gene: LotjaGi5g1v0004500
Domains
9
LotjaGi5g1v0004500.2
– Vacuolar protein sorting-associated protein 35; TAIR: AT1G75850.1 VPS35 homolog B; Swiss-Prot: sp|F4I0P8|VP35B_ARATH Vacuolar protein sorting-associated protein 35B; TrEMBL-Plants: tr|V7CTH6|V7CTH6_PHAVU Vacuolar protein sorting-associated protein 35; Found in the gene: LotjaGi5g1v0004500
Domains
10
LotjaGi5g1v0004500.3
– Vacuolar protein sorting-associated protein 35; TAIR: AT1G75850.1 VPS35 homolog B; Swiss-Prot: sp|F4I0P8|VP35B_ARATH Vacuolar protein sorting-associated protein 35B; TrEMBL-Plants: tr|K7MP25|K7MP25_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0004500
Domains
9
LotjaGi5g1v0004500.4
– Vacuolar protein sorting-associated protein 35; TAIR: AT1G75850.1 VPS35 homolog B; Swiss-Prot: sp|F4I0P8|VP35B_ARATH Vacuolar protein sorting-associated protein 35B; TrEMBL-Plants: tr|A0A0B2PY20|A0A0B2PY20_GLYSO Vacuolar protein sorting-associated protein 35; Found in the gene: LotjaGi5g1v0004500
Domains
9
LotjaGi5g1v0004500.5
– Vacuolar protein sorting-associated protein 35; TAIR: AT1G75850.2 VPS35 homolog B; Swiss-Prot: sp|F4I0P8|VP35B_ARATH Vacuolar protein sorting-associated protein 35B; TrEMBL-Plants: tr|A0A0L9V2B0|A0A0L9V2B0_PHAAN Vacuolar protein sorting-associated protein 35; Found in the gene: LotjaGi5g1v0004500
Domains
6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
PTHR11099:SF3 PANTHER 1 6.25