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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0381200 |
| Transcript ID | LotjaGi2g1v0381200.2 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | protein kinase family protein; TAIR: AT2G17890.1 calcium-dependent protein kinase 16; Swiss-Prot: sp|Q7XJR9|CDPKG_ARATH Calcium-dependent protein kinase 16; TrEMBL-Plants: tr|Q5D875|Q5D875_MEDTR Calcium-dependent kinase; Found in the gene: LotjaGi2g1v0381200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87762743..87766232) extracted from Lotus japonicus Gifu genome v1.2.
GTTACTGACTGTTGTCTGCCTGAACTTTGTGTTTGGCAAGGTGTTTTTTTTCATGTAACAAATCTTACTTTGTCTACCTT CGCATTTATCAGGAAGGACAGCCGGTATACTGAAAAAGATGCAGCAGTAGTTGTAAGGCAGATGCTTAAGGTTGCAGCAG AGTGTCATTTACACGGTTTGGTACATCGCGATATGAAACCAGAGGTCTGTTTCATTCCACTGGCTTATATAAGGAATATG GAGTTATTCTACTAGACATTAAAATATTTTTGTTTCCTCTTTGAATGCAGAATTTCCTTTTCAAATCAAACCGAGAAGAT TCAGCTTTAAAGGCTACCGATTTTGGTTTGTCTGATTTCATAAAACCTGGTAAGGAAAAACATTCATGTCAATTATTAAT TTGTTAATCATTATTTTGTTTTCTTTTGATTCACCTTTGTATTATACATTTCCTTGCTGTCTTTATTTGAGAGCTCTAGG TCTCTATCTTTGAAAACAATTTCAGGAAAGAAGTTTCAAGATATTGTTGGAAGTGCTTATTATGTTGCACCTGAAGTGTT AAAAAGGAAGTCAGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATTACGTACATATTGCTTTGTGGGAGACGGCCGT TTTGGGACAAGACTGAGGATGGAATCTTCAAGGAGGTACAGTTCATTCTTACGACATTTGAGTTTCTTGTAATTTATGCT GGATTTGTTATCTATTCTTGTTTCTTCAAGAAGAGCATGAATAAATCTTTTGCTTACATTTAATTTATGATCATATGCAG GTCTTAAGGAACAAGCCTGATTTCCGGCGAAAACCATGGCCAACCATAAGTAATGCTGCAAAAGATTTTGTGAAGAAATT GTTGGTGAAAGATCCCCGGGCAAGATTAACTGCTGCTCAGGCTCTGTGTATGTATCTAATGATATCTTATTATGAGAAGT CTGTTTATTGTGTGATTTAATTTCTGAGAAATATTACATTTTGGTCACTGCCTTATATTTAGGGTGTTCAATAACTAAAA GCTTAAGCACTGGACTTATATCATTTGAAAAGTTATTGATTTCAAAGACAGGTTTTAAGATTTAACAAAAAAATTCCCCT TAAAAATAGAAGTATTTTGTTTGTTATAGAAAATATTGAAATTATGCATATTGCAAAGTTGCCCTTATTTTAGGCTTTCT AGTATGCAACCAAATTTTAAAATTTTGGGTTAACTTTTTTTCTCTGCTTGAGACCAATTTGTTTTTACTGACAAATGACT ACAATTTTTTGTTTTCAATGGATGTTTGCTTGAATTATAAGTATGTTAAATTATTAAAATGAAAAAGAACGGAAGGAGGA AAAATTGGAAAATTAAAATAGAGCAAAGGACTAAAGGAAAAACAACAGATTGCATAATTGATTGCACATACCTATTGGTG CAAGTATGCAACAGTCAAGAAGTATATAGTCATTAAACTGATTATATAAAAGGAGCCAAGAGTACTTAAGTAGACATTTT CAAAATGAGTGCAGGGCCTATACGTCCTTACGTATATTAAATAGTCCTTACGTATATTAAATAGCTAGAGCAGCTCCACT CTTTCTGTTAAATGTTCAGCCATGCTTGGTTTGTTTAATTAATGCTGCAGTTTTTTATTAAAAAAATGTTTCAGTTTAAA CTCAGCAGTCTTGCTAATAGTGTTTTTAAGAATGAGCTGAGACCCAAACATAACATAGCTGTGTTCAAACTGTACATAAT CTCCCTTTTTTATTTTTTTCTTAAAAATGAAGCTATACCATAATATTAAGTTGTACTGATGAATTGTGTTATTTCCAGCA CATTCATGGGTTAGAGAAGGAGGAGATGCTTTGGAGATTCCTATTGATATATCTGTCCTGGGCAACATGCGACAGTTTGT AAAGTATAGTCGTTTGAAACAATTTGCACTAAGGGTAAGAAGACAAATTAATTGAAATTTTTGCATTATAGAAGGCATGG AATTTGTTTGATAATTTTATGTTGATTACCTTGTTACTTGATTATCTTGCAGGCATTGGCTAGCACTCTTAATGAAGATG AGTTGTCTGATCTAAAGGATCAGTTTGATGCGATAGATGTGGACAAAAATGGTGCTATTAGTCTTGAAGAGATGAGACAG GTAACCCATTAATCAACTGCTCTCTGACTATATTAAATTTAAAACACATCACATATCTGTTATCTAGTAATTAAACCCTT GAATATAGTTTTCCCTGCTTTGTTCTAAAGTGATGGTTCTGTGTAGGCTCTTGCTAAAGATCTCCCTTGGAAGTTGAAAG AATCACGTGTGCTAGAGATATTGCAAGCGGTGAGCATCTATGATCCTTTGCAGGCACTACATAGTTTTTTCACCACTTAT CAGTCCTTATTTCACTTATTAAATTTGAAATATGTGGAGTTTCTTTGGTGGTTAATGATATTGTTTTCCATGCATCTGCA TATTTCATGCCTTGTTAAAATCAATGTGTTGTGCGTTGGCAGATAGACAGCAACACAGATGGGTTAGTGGATTTCGCCGA GTTTGTGGCAGCTACATTACATGTGCATCAATTGGAGGAACATGACTCTGATAAGTGGCAGCAACGGTCTCAGGCAGCTT TTCTGAAATTTGACTTGGATAAGGATGGCTTTATTACTAAGGATGAACTCAGAATGGTTAGTCTCATGCCTTTGTCAAAC TACCTGAACATGATAAACAATTCCCTAGAAATTAAACGTTGTTCTCCTGCTATATATTTAATTGATTTTTGCATCCTTTA TCATGGTTTATGTTTTTTTTCCTAGGGGAGGGAAGTGTGGTGTTTATTCAGAGCTAGAAACTCTAGACCACTTGAGCTCT GTATACACTTGTAAAATAATGTTGAGAAGTTTCAGTTGACTAGAGATATGGCCAAATAAGTGCTTATAAAGGATAGATCA ATCCACAACCGTGAGTTAGCTTTGGGGTAGAGTTATGCTTAGCCCGAATTTTGGGGTAGAGCAATCCTCAACCCTGCAAA TTTGCGCTCTAGATACTCAGCCCTGGGCGTGAAGGGGGTGTTGATAGGTCCTACGTTGGCTAGAGATATGGTCAAATAAA TCCTTAAAAATGGTAGAAATAGAATAATCATCACTCTTGAGCTTGCTTTTGGGGTAGAGTTAGGCTTAGCCCATTTCTAA GATGTTATGAACTAGCTATCTCAAGCTTAAGTAATATACACTCAAATTGGTTTTATATTATATTTCTAAGGATTTGTAAT ATCAGGTACATATTTGCTGCAACTAATGTCACTCTCATTTTGGTTTTTTAGCATACTGGTCTGAGAGGCTCCATTGATCC ATTGCTTGAGGAAGCCGATATTGACAAAGATGGAAAAATCAGCTTACAAGAATTCCGTAGACTTCTAAGAACTGCAAGCA TTGGTTCTCGAAATGTTTCAAGCCCAAGTCACCGTCAGCGGAAGATCTAA
CDS sequence (LotjaGi2g1v0381200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTAAGGTTGCAGCAGAGTGTCATTTACACGGTTTGGTACATCGCGATATGAAACCAGAGAATTTCCTTTTCAAATC AAACCGAGAAGATTCAGCTTTAAAGGCTACCGATTTTGGTTTGTCTGATTTCATAAAACCTGGAAAGAAGTTTCAAGATA TTGTTGGAAGTGCTTATTATGTTGCACCTGAAGTGTTAAAAAGGAAGTCAGGCCCTGAATCAGATGTATGGAGTATTGGT GTGATTACGTACATATTGCTTTGTGGGAGACGGCCGTTTTGGGACAAGACTGAGGATGGAATCTTCAAGGAGGTCTTAAG GAACAAGCCTGATTTCCGGCGAAAACCATGGCCAACCATAAGTAATGCTGCAAAAGATTTTGTGAAGAAATTGTTGGTGA AAGATCCCCGGGCAAGATTAACTGCTGCTCAGGCTCTGTCACATTCATGGGTTAGAGAAGGAGGAGATGCTTTGGAGATT CCTATTGATATATCTGTCCTGGGCAACATGCGACAGTTTGTAAAGTATAGTCGTTTGAAACAATTTGCACTAAGGGCATT GGCTAGCACTCTTAATGAAGATGAGTTGTCTGATCTAAAGGATCAGTTTGATGCGATAGATGTGGACAAAAATGGTGCTA TTAGTCTTGAAGAGATGAGACAGGCTCTTGCTAAAGATCTCCCTTGGAAGTTGAAAGAATCACGTGTGCTAGAGATATTG CAAGCGATAGACAGCAACACAGATGGGTTAGTGGATTTCGCCGAGTTTGTGGCAGCTACATTACATGTGCATCAATTGGA GGAACATGACTCTGATAAGTGGCAGCAACGGTCTCAGGCAGCTTTTCTGAAATTTGACTTGGATAAGGATGGCTTTATTA CTAAGGATGAACTCAGAATGCATACTGGTCTGAGAGGCTCCATTGATCCATTGCTTGAGGAAGCCGATATTGACAAAGAT GGAAAAATCAGCTTACAAGAATTCCGTAGACTTCTAAGAACTGCAAGCATTGGTTCTCGAAATGTTTCAAGCCCAAGTCA CCGTCAGCGGAAGATCTAA
Protein sequence (LotjaGi2g1v0381200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLKVAAECHLHGLVHRDMKPENFLFKSNREDSALKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIG VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARLTAAQALSHSWVREGGDALEI PIDISVLGNMRQFVKYSRLKQFALRALASTLNEDELSDLKDQFDAIDVDKNGAISLEEMRQALAKDLPWKLKESRVLEIL QAIDSNTDGLVDFAEFVAATLHVHQLEEHDSDKWQQRSQAAFLKFDLDKDGFITKDELRMHTGLRGSIDPLLEEADIDKD GKISLQEFRRLLRTASIGSRNVSSPSHRQRKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 156 | 156 | 1.3E-102 | – | |
| ProSiteProfiles | 1 | 151 | 151 | 30.662 | ||
| SMART | 1 | 151 | 151 | 2.9E-11 | ||
| PANTHER | 1 | 346 | 346 | 3.3E-220 | – | |
| PANTHER | 1 | 346 | 346 | 3.3E-220 | – | |
| Pfam | 6 | 151 | 146 | 1.5E-40 | ||
| SUPERFAMILY | 7 | 169 | 163 | 1.78E-44 | ||
| ProSitePatterns | 13 | 25 | 13 | - | ||
| Gene3D | 157 | 330 | 174 | 1.3E-102 | – | |
| SUPERFAMILY | 183 | 334 | 152 | 1.08E-33 | ||
| ProSiteProfiles | 194 | 229 | 36 | 12.812 | ||
| Pfam | 197 | 260 | 64 | 2.8E-9 | ||
| SMART | 198 | 226 | 29 | 0.0026 | ||
| ProSitePatterns | 207 | 219 | 13 | - | ||
| ProSiteProfiles | 231 | 266 | 36 | 9.994 | ||
| SMART | 235 | 263 | 29 | 2.7 | ||
| ProSitePatterns | 244 | 256 | 13 | - | ||
| ProSiteProfiles | 273 | 308 | 36 | 11.138 | ||
| SMART | 277 | 305 | 29 | 1.6 | ||
| Pfam | 279 | 332 | 54 | 1.2E-9 | ||
| ProSitePatterns | 286 | 298 | 13 | - | ||
| SMART | 307 | 335 | 29 | 0.0032 | ||
| ProSiteProfiles | 311 | 338 | 28 | 10.245 | ||
| ProSitePatterns | 316 | 328 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0381200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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