Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0381200 |
| Transcript ID | LotjaGi2g1v0381200.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | protein kinase family protein; TAIR: AT5G66210.1 calcium-dependent protein kinase 28; Swiss-Prot: sp|Q9FKW4|CDPKS_ARATH Calcium-dependent protein kinase 28; TrEMBL-Plants: tr|A0A0B2RNC7|A0A0B2RNC7_GLYSO Calcium-dependent protein kinase 28; Found in the gene: LotjaGi2g1v0381200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87762743..87767437) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGCATATGTTTTTCCTCCACCAAGGTCAGCGGCTCTAACAGCACCAACAACAACACCACCACCACCACCGATGCCGC CGCCAACCGCAAACAACGGAGTTCGGAGACGACAACCACGGTGGTGCAGAAGCAGCAAGCGACGACCGGTCAACGCCGGA GGTCGACGGAAGACGCACAGAAGAAGCAGAAACCCAAAGAGAAAACCGGTTCGAGGAGGCAAGGGGGGCATGTCCCGTGC GGGAAGCGCACAGATTTCGGTTACGATAAAGACTTCGATAAGAAATTCTCGCTCGGGAAATTGTTGGGACATGGCCAATT CGGTTACACCTATGTTGGAATCGATAAATTCAATGGGGATCGTGTCGCTGTTAAGAGACTCGAGAAGAACAAGGTATGTT TCTATTTATGATTCACTTTTAAGATTCAGGTTTTTTAATTTGATTCTATTCTATCTATGTGTTCTGTTTCATGGATATGC TTCCATTTAGATCTTCATGCTTGGTGAAATGAATCTCATTTTACATTTTTTAAATATTTTTCTCCCCAATTGAGGTTTTG TTTAGTTAATGGGTCAGGAAGATTTATGGGGTTTTTCCTTAATTGTGAAGGGCTTTTCTTTTTGCAATGCCTAATGAATC AAGTGAATTACTTGCTGTTATTGCTCTGCTTTGTTTTCGTGCGAGGTTTCACGTGTTTCTGAATCGATTATTGTATGTGA TGGCAGATGGTTCTCCCCATAGCGGTTGAGGATGTTAAGAGAGAGGTCAAGATATTGAAAGCACTTACTGGCCATGAAAA TGTGGTTCAGTTCCATAATGCTTTTGAGGATGATTCATATGTATATATAGTTATGGAGTAAGTTACTTGTGCTTTTAGTC TCTTTCTTATATGATGTTTCACTGTTTTAATGTGATCATGTGCAGCACTTGACTATAAGATATTCTGGAATCAATCTAGT TATACCTTTTGGGAGCTGATTTATCACACATTTTCTGTTGCTTTTACTTTCTATTGTTCCTTCACATGTCCTTACTAAAG TGATCTTCTTGACTATTTATCTTAGGTTATGCGAGGGTGGAGAATTGCTAGATCGGATATTGGCCAAGTAAGTTCTGTTT GGTGTTAAATGTGATTGATTCTTTTTTCCTTGGCCAAGTGGCTCTTCGTAATGGATATGGCCTTTTAAATTTCAGAACCA GGGTCGTTACTGACTGTTGTCTGCCTGAACTTTGTGTTTGGCAAGGTGTTTTTTTTCATGTAACAAATCTTACTTTGTCT ACCTTCGCATTTATCAGGAAGGACAGCCGGTATACTGAAAAAGATGCAGCAGTAGTTGTAAGGCAGATGCTTAAGGTTGC AGCAGAGTGTCATTTACACGGTTTGGTACATCGCGATATGAAACCAGAGGTCTGTTTCATTCCACTGGCTTATATAAGGA ATATGGAGTTATTCTACTAGACATTAAAATATTTTTGTTTCCTCTTTGAATGCAGAATTTCCTTTTCAAATCAAACCGAG AAGATTCAGCTTTAAAGGCTACCGATTTTGGTTTGTCTGATTTCATAAAACCTGGTAAGGAAAAACATTCATGTCAATTA TTAATTTGTTAATCATTATTTTGTTTTCTTTTGATTCACCTTTGTATTATACATTTCCTTGCTGTCTTTATTTGAGAGCT CTAGGTCTCTATCTTTGAAAACAATTTCAGGAAAGAAGTTTCAAGATATTGTTGGAAGTGCTTATTATGTTGCACCTGAA GTGTTAAAAAGGAAGTCAGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATTACGTACATATTGCTTTGTGGGAGACG GCCGTTTTGGGACAAGACTGAGGATGGAATCTTCAAGGAGGTACAGTTCATTCTTACGACATTTGAGTTTCTTGTAATTT ATGCTGGATTTGTTATCTATTCTTGTTTCTTCAAGAAGAGCATGAATAAATCTTTTGCTTACATTTAATTTATGATCATA TGCAGGTCTTAAGGAACAAGCCTGATTTCCGGCGAAAACCATGGCCAACCATAAGTAATGCTGCAAAAGATTTTGTGAAG AAATTGTTGGTGAAAGATCCCCGGGCAAGATTAACTGCTGCTCAGGCTCTGTGTATGTATCTAATGATATCTTATTATGA GAAGTCTGTTTATTGTGTGATTTAATTTCTGAGAAATATTACATTTTGGTCACTGCCTTATATTTAGGGTGTTCAATAAC TAAAAGCTTAAGCACTGGACTTATATCATTTGAAAAGTTATTGATTTCAAAGACAGGTTTTAAGATTTAACAAAAAAATT CCCCTTAAAAATAGAAGTATTTTGTTTGTTATAGAAAATATTGAAATTATGCATATTGCAAAGTTGCCCTTATTTTAGGC TTTCTAGTATGCAACCAAATTTTAAAATTTTGGGTTAACTTTTTTTCTCTGCTTGAGACCAATTTGTTTTTACTGACAAA TGACTACAATTTTTTGTTTTCAATGGATGTTTGCTTGAATTATAAGTATGTTAAATTATTAAAATGAAAAAGAACGGAAG GAGGAAAAATTGGAAAATTAAAATAGAGCAAAGGACTAAAGGAAAAACAACAGATTGCATAATTGATTGCACATACCTAT TGGTGCAAGTATGCAACAGTCAAGAAGTATATAGTCATTAAACTGATTATATAAAAGGAGCCAAGAGTACTTAAGTAGAC ATTTTCAAAATGAGTGCAGGGCCTATACGTCCTTACGTATATTAAATAGTCCTTACGTATATTAAATAGCTAGAGCAGCT CCACTCTTTCTGTTAAATGTTCAGCCATGCTTGGTTTGTTTAATTAATGCTGCAGTTTTTTATTAAAAAAATGTTTCAGT TTAAACTCAGCAGTCTTGCTAATAGTGTTTTTAAGAATGAGCTGAGACCCAAACATAACATAGCTGTGTTCAAACTGTAC ATAATCTCCCTTTTTTATTTTTTTCTTAAAAATGAAGCTATACCATAATATTAAGTTGTACTGATGAATTGTGTTATTTC CAGCACATTCATGGGTTAGAGAAGGAGGAGATGCTTTGGAGATTCCTATTGATATATCTGTCCTGGGCAACATGCGACAG TTTGTAAAGTATAGTCGTTTGAAACAATTTGCACTAAGGGTAAGAAGACAAATTAATTGAAATTTTTGCATTATAGAAGG CATGGAATTTGTTTGATAATTTTATGTTGATTACCTTGTTACTTGATTATCTTGCAGGCATTGGCTAGCACTCTTAATGA AGATGAGTTGTCTGATCTAAAGGATCAGTTTGATGCGATAGATGTGGACAAAAATGGTGCTATTAGTCTTGAAGAGATGA GACAGGTAACCCATTAATCAACTGCTCTCTGACTATATTAAATTTAAAACACATCACATATCTGTTATCTAGTAATTAAA CCCTTGAATATAGTTTTCCCTGCTTTGTTCTAAAGTGATGGTTCTGTGTAGGCTCTTGCTAAAGATCTCCCTTGGAAGTT GAAAGAATCACGTGTGCTAGAGATATTGCAAGCGGTGAGCATCTATGATCCTTTGCAGGCACTACATAGTTTTTTCACCA CTTATCAGTCCTTATTTCACTTATTAAATTTGAAATATGTGGAGTTTCTTTGGTGGTTAATGATATTGTTTTCCATGCAT CTGCATATTTCATGCCTTGTTAAAATCAATGTGTTGTGCGTTGGCAGATAGACAGCAACACAGATGGGTTAGTGGATTTC GCCGAGTTTGTGGCAGCTACATTACATGTGCATCAATTGGAGGAACATGACTCTGATAAGTGGCAGCAACGGTCTCAGGC AGCTTTTCTGAAATTTGACTTGGATAAGGATGGCTTTATTACTAAGGATGAACTCAGAATGGTTAGTCTCATGCCTTTGT CAAACTACCTGAACATGATAAACAATTCCCTAGAAATTAAACGTTGTTCTCCTGCTATATATTTAATTGATTTTTGCATC CTTTATCATGGTTTATGTTTTTTTTCCTAGGGGAGGGAAGTGTGGTGTTTATTCAGAGCTAGAAACTCTAGACCACTTGA GCTCTGTATACACTTGTAAAATAATGTTGAGAAGTTTCAGTTGACTAGAGATATGGCCAAATAAGTGCTTATAAAGGATA GATCAATCCACAACCGTGAGTTAGCTTTGGGGTAGAGTTATGCTTAGCCCGAATTTTGGGGTAGAGCAATCCTCAACCCT GCAAATTTGCGCTCTAGATACTCAGCCCTGGGCGTGAAGGGGGTGTTGATAGGTCCTACGTTGGCTAGAGATATGGTCAA ATAAATCCTTAAAAATGGTAGAAATAGAATAATCATCACTCTTGAGCTTGCTTTTGGGGTAGAGTTAGGCTTAGCCCATT TCTAAGATGTTATGAACTAGCTATCTCAAGCTTAAGTAATATACACTCAAATTGGTTTTATATTATATTTCTAAGGATTT GTAATATCAGGTACATATTTGCTGCAACTAATGTCACTCTCATTTTGGTTTTTTAGCATACTGGTCTGAGAGGCTCCATT GATCCATTGCTTGAGGAAGCCGATATTGACAAAGATGGAAAAATCAGCTTACAAGAATTCCGTAGACTTCTAAGAACTGC AAGCATTGGTTCTCGAAATGTTTCAAGCCCAAGTCACCGTCAGCGGAAGATCTAA
CDS sequence (LotjaGi2g1v0381200.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCATATGTTTTTCCTCCACCAAGGTCAGCGGCTCTAACAGCACCAACAACAACACCACCACCACCACCGATGCCGC CGCCAACCGCAAACAACGGAGTTCGGAGACGACAACCACGGTGGTGCAGAAGCAGCAAGCGACGACCGGTCAACATGTCC CGTGCGGGAAGCGCACAGATTTCGGTTACGATAAAGACTTCGATAAGAAATTCTCGCTCGGGAAATTGTTGGGACATGGC CAATTCGGTTACACCTATGTTGGAATCGATAAATTCAATGGGGATCGTGTCGCTGTTAAGAGACTCGAGAAGAACAAGAT GGTTCTCCCCATAGCGGTTGAGGATGTTAAGAGAGAGGTCAAGATATTGAAAGCACTTACTGGCCATGAAAATGTGGTTC AGTTCCATAATGCTTTTGAGGATGATTCATATGTATATATAGTTATGGAGTTATGCGAGGGTGGAGAATTGCTAGATCGG ATATTGGCCAAGAAGGACAGCCGGTATACTGAAAAAGATGCAGCAGTAGTTGTAAGGCAGATGCTTAAGGTTGCAGCAGA GTGTCATTTACACGGTTTGGTACATCGCGATATGAAACCAGAGAATTTCCTTTTCAAATCAAACCGAGAAGATTCAGCTT TAAAGGCTACCGATTTTGGTTTGTCTGATTTCATAAAACCTGGAAAGAAGTTTCAAGATATTGTTGGAAGTGCTTATTAT GTTGCACCTGAAGTGTTAAAAAGGAAGTCAGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATTACGTACATATTGCT TTGTGGGAGACGGCCGTTTTGGGACAAGACTGAGGATGGAATCTTCAAGGAGGTCTTAAGGAACAAGCCTGATTTCCGGC GAAAACCATGGCCAACCATAAGTAATGCTGCAAAAGATTTTGTGAAGAAATTGTTGGTGAAAGATCCCCGGGCAAGATTA ACTGCTGCTCAGGCTCTGTCACATTCATGGGTTAGAGAAGGAGGAGATGCTTTGGAGATTCCTATTGATATATCTGTCCT GGGCAACATGCGACAGTTTGTAAAGTATAGTCGTTTGAAACAATTTGCACTAAGGGCTCTTGCTAAAGATCTCCCTTGGA AGTTGAAAGAATCACGTGTGCTAGAGATATTGCAAGCGATAGACAGCAACACAGATGGGTTAGTGGATTTCGCCGAGTTT GTGGCAGCTACATTACATGTGCATCAATTGGAGGAACATGACTCTGATAAGTGGCAGCAACGGTCTCAGGCAGCTTTTCT GAAATTTGACTTGGATAAGGATGGCTTTATTACTAAGGATGAACTCAGAATGCATACTGGTCTGAGAGGCTCCATTGATC CATTGCTTGAGGAAGCCGATATTGACAAAGATGGAAAAATCAGCTTACAAGAATTCCGTAGACTTCTAAGAACTGCAAGC ATTGGTTCTCGAAATGTTTCAAGCCCAAGTCACCGTCAGCGGAAGATCTAA
Protein sequence (LotjaGi2g1v0381200.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGICFSSTKVSGSNSTNNNTTTTTDAAANRKQRSSETTTTVVQKQQATTGQHVPCGKRTDFGYDKDFDKKFSLGKLLGHG QFGYTYVGIDKFNGDRVAVKRLEKNKMVLPIAVEDVKREVKILKALTGHENVVQFHNAFEDDSYVYIVMELCEGGELLDR ILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSNREDSALKATDFGLSDFIKPGKKFQDIVGSAYY VAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARL TAAQALSHSWVREGGDALEIPIDISVLGNMRQFVKYSRLKQFALRALAKDLPWKLKESRVLEILQAIDSNTDGLVDFAEF VAATLHVHQLEEHDSDKWQQRSQAAFLKFDLDKDGFITKDELRMHTGLRGSIDPLLEEADIDKDGKISLQEFRRLLRTAS IGSRNVSSPSHRQRKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 49 | 49 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| PANTHER | 6 | 368 | 363 | 1.1E-268 | – | |
| PANTHER | 6 | 368 | 363 | 1.1E-268 | – | |
| SUPERFAMILY | 69 | 344 | 276 | 6.61E-80 | ||
| CDD | 70 | 330 | 261 | 5.40809E-122 | – | |
| SMART | 71 | 331 | 261 | 9.8E-89 | ||
| ProSiteProfiles | 71 | 331 | 261 | 48.273 | ||
| Gene3D | 72 | 154 | 83 | 1.9E-108 | – | |
| Pfam | 73 | 331 | 259 | 2.3E-67 | ||
| ProSitePatterns | 77 | 100 | 24 | - | ||
| Gene3D | 155 | 336 | 182 | 1.9E-108 | – | |
| ProSitePatterns | 193 | 205 | 13 | - | ||
| Gene3D | 337 | 371 | 35 | 1.9E-108 | – | |
| SUPERFAMILY | 362 | 478 | 117 | 1.36E-23 | ||
| Pfam | 365 | 404 | 40 | 0.016 | – | |
| PANTHER | 366 | 490 | 125 | 1.1E-268 | – | |
| PANTHER | 366 | 490 | 125 | 1.1E-268 | – | |
| Gene3D | 374 | 405 | 32 | 1.5E-22 | – | |
| ProSiteProfiles | 375 | 410 | 36 | 9.994 | ||
| SMART | 379 | 407 | 29 | 2.7 | ||
| ProSitePatterns | 388 | 400 | 13 | - | ||
| Gene3D | 406 | 475 | 70 | 1.5E-22 | – | |
| ProSiteProfiles | 417 | 452 | 36 | 11.138 | ||
| SMART | 421 | 449 | 29 | 1.6 | ||
| Pfam | 423 | 476 | 54 | 2.0E-9 | ||
| CDD | 423 | 477 | 55 | 6.69999E-12 | ||
| ProSitePatterns | 430 | 442 | 13 | - | ||
| SMART | 451 | 479 | 29 | 0.0032 | ||
| ProSiteProfiles | 455 | 482 | 28 | 10.245 | ||
| ProSitePatterns | 460 | 472 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0381200.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…