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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0381200 |
| Transcript ID | LotjaGi2g1v0381200.6 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | protein kinase family protein; TAIR: AT5G66210.1 calcium-dependent protein kinase 28; Swiss-Prot: sp|Q9FKW4|CDPKS_ARATH Calcium-dependent protein kinase 28; TrEMBL-Plants: tr|A0A0B2RNC7|A0A0B2RNC7_GLYSO Calcium-dependent protein kinase 28; Found in the gene: LotjaGi2g1v0381200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87762743..87767437) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGCATATGTTTTTCCTCCACCAAGGTCAGCGGCTCTAACAGCACCAACAACAACACCACCACCACCACCGATGCCGC CGCCAACCGCAAACAACGGAGTTCGGAGACGACAACCACGGTGGTGCAGAAGCAGCAAGCGACGACCGGTCAACGCCGGA GGTCGACGGAAGACGCACAGAAGAAGCAGAAACCCAAAGAGAAAACCGGTTCGAGGAGGCAAGGGGGGCATGTCCCGTGC GGGAAGCGCACAGATTTCGGTTACGATAAAGACTTCGATAAGAAATTCTCGCTCGGGAAATTGTTGGGACATGGCCAATT CGGTTACACCTATGTTGGAATCGATAAATTCAATGGGGATCGTGTCGCTGTTAAGAGACTCGAGAAGAACAAGGTATGTT TCTATTTATGATTCACTTTTAAGATTCAGGTTTTTTAATTTGATTCTATTCTATCTATGTGTTCTGTTTCATGGATATGC TTCCATTTAGATCTTCATGCTTGGTGAAATGAATCTCATTTTACATTTTTTAAATATTTTTCTCCCCAATTGAGGTTTTG TTTAGTTAATGGGTCAGGAAGATTTATGGGGTTTTTCCTTAATTGTGAAGGGCTTTTCTTTTTGCAATGCCTAATGAATC AAGTGAATTACTTGCTGTTATTGCTCTGCTTTGTTTTCGTGCGAGGTTTCACGTGTTTCTGAATCGATTATTGTATGTGA TGGCAGATGGTTCTCCCCATAGCGGTTGAGGATGTTAAGAGAGAGGTCAAGATATTGAAAGCACTTACTGGCCATGAAAA TGTGGTTCAGTTCCATAATGCTTTTGAGGATGATTCATATGTATATATAGTTATGGAGTAAGTTACTTGTGCTTTTAGTC TCTTTCTTATATGATGTTTCACTGTTTTAATGTGATCATGTGCAGCACTTGACTATAAGATATTCTGGAATCAATCTAGT TATACCTTTTGGGAGCTGATTTATCACACATTTTCTGTTGCTTTTACTTTCTATTGTTCCTTCACATGTCCTTACTAAAG TGATCTTCTTGACTATTTATCTTAGGTTATGCGAGGGTGGAGAATTGCTAGATCGGATATTGGCCAAGTAAGTTCTGTTT GGTGTTAAATGTGATTGATTCTTTTTTCCTTGGCCAAGTGGCTCTTCGTAATGGATATGGCCTTTTAAATTTCAGAACCA GGGTCGTTACTGACTGTTGTCTGCCTGAACTTTGTGTTTGGCAAGGTGTTTTTTTTCATGTAACAAATCTTACTTTGTCT ACCTTCGCATTTATCAGGAAGGACAGCCGGTATACTGAAAAAGATGCAGCAGTAGTTGTAAGGCAGATGCTTAAGGTTGC AGCAGAGTGTCATTTACACGGTTTGGTACATCGCGATATGAAACCAGAGGTCTGTTTCATTCCACTGGCTTATATAAGGA ATATGGAGTTATTCTACTAGACATTAAAATATTTTTGTTTCCTCTTTGAATGCAGAATTTCCTTTTCAAATCAAACCGAG AAGATTCAGCTTTAAAGGCTACCGATTTTGGTTTGTCTGATTTCATAAAACCTGGTAAGGAAAAACATTCATGTCAATTA TTAATTTGTTAATCATTATTTTGTTTTCTTTTGATTCACCTTTGTATTATACATTTCCTTGCTGTCTTTATTTGAGAGCT CTAGGTCTCTATCTTTGAAAACAATTTCAGGAAAGAAGTTTCAAGATATTGTTGGAAGTGCTTATTATGTTGCACCTGAA GTGTTAAAAAGGAAGTCAGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATTACGTACATATTGCTTTGTGGGAGACG GCCGTTTTGGGACAAGACTGAGGATGGAATCTTCAAGGAGGTACAGTTCATTCTTACGACATTTGAGTTTCTTGTAATTT ATGCTGGATTTGTTATCTATTCTTGTTTCTTCAAGAAGAGCATGAATAAATCTTTTGCTTACATTTAATTTATGATCATA TGCAGGTCTTAAGGAACAAGCCTGATTTCCGGCGAAAACCATGGCCAACCATAAGTAATGCTGCAAAAGATTTTGTGAAG AAATTGTTGGTGAAAGATCCCCGGGCAAGATTAACTGCTGCTCAGGCTCTGTGTATGTATCTAATGATATCTTATTATGA GAAGTCTGTTTATTGTGTGATTTAATTTCTGAGAAATATTACATTTTGGTCACTGCCTTATATTTAGGGTGTTCAATAAC TAAAAGCTTAAGCACTGGACTTATATCATTTGAAAAGTTATTGATTTCAAAGACAGGTTTTAAGATTTAACAAAAAAATT CCCCTTAAAAATAGAAGTATTTTGTTTGTTATAGAAAATATTGAAATTATGCATATTGCAAAGTTGCCCTTATTTTAGGC TTTCTAGTATGCAACCAAATTTTAAAATTTTGGGTTAACTTTTTTTCTCTGCTTGAGACCAATTTGTTTTTACTGACAAA TGACTACAATTTTTTGTTTTCAATGGATGTTTGCTTGAATTATAAGTATGTTAAATTATTAAAATGAAAAAGAACGGAAG GAGGAAAAATTGGAAAATTAAAATAGAGCAAAGGACTAAAGGAAAAACAACAGATTGCATAATTGATTGCACATACCTAT TGGTGCAAGTATGCAACAGTCAAGAAGTATATAGTCATTAAACTGATTATATAAAAGGAGCCAAGAGTACTTAAGTAGAC ATTTTCAAAATGAGTGCAGGGCCTATACGTCCTTACGTATATTAAATAGTCCTTACGTATATTAAATAGCTAGAGCAGCT CCACTCTTTCTGTTAAATGTTCAGCCATGCTTGGTTTGTTTAATTAATGCTGCAGTTTTTTATTAAAAAAATGTTTCAGT TTAAACTCAGCAGTCTTGCTAATAGTGTTTTTAAGAATGAGCTGAGACCCAAACATAACATAGCTGTGTTCAAACTGTAC ATAATCTCCCTTTTTTATTTTTTTCTTAAAAATGAAGCTATACCATAATATTAAGTTGTACTGATGAATTGTGTTATTTC CAGCACATTCATGGGTTAGAGAAGGAGGAGATGCTTTGGAGATTCCTATTGATATATCTGTCCTGGGCAACATGCGACAG TTTGTAAAGTATAGTCGTTTGAAACAATTTGCACTAAGGGTAAGAAGACAAATTAATTGAAATTTTTGCATTATAGAAGG CATGGAATTTGTTTGATAATTTTATGTTGATTACCTTGTTACTTGATTATCTTGCAGGCATTGGCTAGCACTCTTAATGA AGATGAGTTGTCTGATCTAAAGGATCAGTTTGATGCGATAGATGTGGACAAAAATGGTGCTATTAGTCTTGAAGAGATGA GACAGGTAACCCATTAATCAACTGCTCTCTGACTATATTAAATTTAAAACACATCACATATCTGTTATCTAGTAATTAAA CCCTTGAATATAGTTTTCCCTGCTTTGTTCTAAAGTGATGGTTCTGTGTAGGCTCTTGCTAAAGATCTCCCTTGGAAGTT GAAAGAATCACGTGTGCTAGAGATATTGCAAGCGGTGAGCATCTATGATCCTTTGCAGGCACTACATAGTTTTTTCACCA CTTATCAGTCCTTATTTCACTTATTAAATTTGAAATATGTGGAGTTTCTTTGGTGGTTAATGATATTGTTTTCCATGCAT CTGCATATTTCATGCCTTGTTAAAATCAATGTGTTGTGCGTTGGCAGATAGACAGCAACACAGATGGGTTAGTGGATTTC GCCGAGTTTGTGGCAGCTACATTACATGTGCATCAATTGGAGGAACATGACTCTGATAAGTGGCAGCAACGGTCTCAGGC AGCTTTTCTGAAATTTGACTTGGATAAGGATGGCTTTATTACTAAGGATGAACTCAGAATGGTTAGTCTCATGCCTTTGT CAAACTACCTGAACATGATAAACAATTCCCTAGAAATTAAACGTTGTTCTCCTGCTATATATTTAATTGATTTTTGCATC CTTTATCATGGTTTATGTTTTTTTTCCTAGGGGAGGGAAGTGTGGTGTTTATTCAGAGCTAGAAACTCTAGACCACTTGA GCTCTGTATACACTTGTAAAATAATGTTGAGAAGTTTCAGTTGACTAGAGATATGGCCAAATAAGTGCTTATAAAGGATA GATCAATCCACAACCGTGAGTTAGCTTTGGGGTAGAGTTATGCTTAGCCCGAATTTTGGGGTAGAGCAATCCTCAACCCT GCAAATTTGCGCTCTAGATACTCAGCCCTGGGCGTGAAGGGGGTGTTGATAGGTCCTACGTTGGCTAGAGATATGGTCAA ATAAATCCTTAAAAATGGTAGAAATAGAATAATCATCACTCTTGAGCTTGCTTTTGGGGTAGAGTTAGGCTTAGCCCATT TCTAAGATGTTATGAACTAGCTATCTCAAGCTTAAGTAATATACACTCAAATTGGTTTTATATTATATTTCTAAGGATTT GTAATATCAGGTACATATTTGCTGCAACTAATGTCACTCTCATTTTGGTTTTTTAGCATACTGGTCTGAGAGGCTCCATT GATCCATTGCTTGAGGAAGCCGATATTGACAAAGATGGAAAAATCAGCTTACAAGAATTCCGTAGACTTCTAAGAACTGC AAGCATTGGTTCTCGAAATGTTTCAAGCCCAAGTCACCGTCAGCGGAAGATCTAA
CDS sequence (LotjaGi2g1v0381200.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCATATGTTTTTCCTCCACCAAGGTCAGCGGCTCTAACAGCACCAACAACAACACCACCACCACCACCGATGCCGC CGCCAACCGCAAACAACGGAGTTCGGAGACGACAACCACGGTGGTGCAGAAGCAGCAAGGGGGGCATGTCCCGTGCGGGA AGCGCACAGATTTCGGTTACGATAAAGACTTCGATAAGAAATTCTCGCTCGGGAAATTGTTGGGACATGGCCAATTCGGT TACACCTATGTTGGAATCGATAAATTCAATGGGGATCGTGTCGCTGTTAAGAGACTCGAGAAGAACAAGATGGTTCTCCC CATAGCGGTTGAGGATGTTAAGAGAGAGGTCAAGATATTGAAAGCACTTACTGGCCATGAAAATGTGGTTCAGTTCCATA ATGCTTTTGAGGATGATTCATATGTATATATAGTTATGGAGTTATGCGAGGGTGGAGAATTGCTAGATCGGATATTGGCC AAGAAGGACAGCCGGTATACTGAAAAAGATGCAGCAGTAGTTGTAAGGCAGATGCTTAAGGTTGCAGCAGAGTGTCATTT ACACGGTTTGGTACATCGCGATATGAAACCAGAGAATTTCCTTTTCAAATCAAACCGAGAAGATTCAGCTTTAAAGGCTA CCGATTTTGGTTTGTCTGATTTCATAAAACCTGGAAAGAAGTTTCAAGATATTGTTGGAAGTGCTTATTATGTTGCACCT GAAGTGTTAAAAAGGAAGTCAGGCCCTGAATCAGATGTATGGAGTATTGGTGTGATTACGTACATATTGCTTTGTGGGAG ACGGCCGTTTTGGGACAAGACTGAGGATGGAATCTTCAAGGAGGTCTTAAGGAACAAGCCTGATTTCCGGCGAAAACCAT GGCCAACCATAAGTAATGCTGCAAAAGATTTTGTGAAGAAATTGTTGGTGAAAGATCCCCGGGCAAGATTAACTGCTGCT CAGGCTCTGTCACATTCATGGGTTAGAGAAGGAGGAGATGCTTTGGAGATTCCTATTGATATATCTGTCCTGGGCAACAT GCGACAGTTTGTAAAGTATAGTCGTTTGAAACAATTTGCACTAAGGGCATTGGCTAGCACTCTTAATGAAGATGAGTTGT CTGATCTAAAGGATCAGTTTGATGCGATAGATGTGGACAAAAATGGTGCTATTAGTCTTGAAGAGATGAGACAGGCTCTT GCTAAAGATCTCCCTTGGAAGTTGAAAGAATCACGTGTGCTAGAGATATTGCAAGCGATAGACAGCAACACAGATGGGTT AGTGGATTTCGCCGAGTTTGTGGCAGCTACATTACATGTGCATCAATTGGAGGAACATGACTCTGATAAGTGGCAGCAAC GGTCTCAGGCAGCTTTTCTGAAATTTGACTTGGATAAGGATGGCTTTATTACTAAGGATGAACTCAGAATGCATACTGGT CTGAGAGGCTCCATTGATCCATTGCTTGAGGAAGCCGATATTGACAAAGATGGAAAAATCAGCTTACAAGAATTCCGTAG ACTTCTAAGAACTGCAAGCATTGGTTCTCGAAATGTTTCAAGCCCAAGTCACCGTCAGCGGAAGATCTAA
Protein sequence (LotjaGi2g1v0381200.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGICFSSTKVSGSNSTNNNTTTTTDAAANRKQRSSETTTTVVQKQQGGHVPCGKRTDFGYDKDFDKKFSLGKLLGHGQFG YTYVGIDKFNGDRVAVKRLEKNKMVLPIAVEDVKREVKILKALTGHENVVQFHNAFEDDSYVYIVMELCEGGELLDRILA KKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSNREDSALKATDFGLSDFIKPGKKFQDIVGSAYYVAP EVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARLTAA QALSHSWVREGGDALEIPIDISVLGNMRQFVKYSRLKQFALRALASTLNEDELSDLKDQFDAIDVDKNGAISLEEMRQAL AKDLPWKLKESRVLEILQAIDSNTDGLVDFAEFVAATLHVHQLEEHDSDKWQQRSQAAFLKFDLDKDGFITKDELRMHTG LRGSIDPLLEEADIDKDGKISLQEFRRLLRTASIGSRNVSSPSHRQRKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| MobiDBLite | 1 | 50 | 50 | - | – | |
| MobiDBLite | 1 | 46 | 46 | - | – | |
| PANTHER | 6 | 523 | 518 | 7.7E-300 | – | |
| PANTHER | 6 | 523 | 518 | 7.7E-300 | – | |
| SUPERFAMILY | 66 | 339 | 274 | 7.69E-80 | ||
| CDD | 67 | 327 | 261 | 2.34587E-121 | – | |
| SMART | 68 | 328 | 261 | 9.8E-89 | ||
| ProSiteProfiles | 68 | 328 | 261 | 48.273 | ||
| Gene3D | 69 | 151 | 83 | 1.4E-140 | – | |
| Pfam | 70 | 328 | 259 | 2.7E-67 | ||
| ProSitePatterns | 74 | 97 | 24 | - | ||
| Gene3D | 152 | 333 | 182 | 1.4E-140 | – | |
| ProSitePatterns | 190 | 202 | 13 | - | ||
| Gene3D | 334 | 507 | 174 | 1.4E-140 | – | |
| SUPERFAMILY | 360 | 511 | 152 | 2.44E-33 | ||
| ProSiteProfiles | 371 | 406 | 36 | 12.812 | ||
| Pfam | 374 | 437 | 64 | 5.2E-9 | ||
| SMART | 375 | 403 | 29 | 0.0026 | ||
| ProSitePatterns | 384 | 396 | 13 | - | ||
| ProSiteProfiles | 408 | 443 | 36 | 9.994 | ||
| SMART | 412 | 440 | 29 | 2.7 | ||
| ProSitePatterns | 421 | 433 | 13 | - | ||
| ProSiteProfiles | 450 | 485 | 36 | 11.138 | ||
| SMART | 454 | 482 | 29 | 1.6 | ||
| Pfam | 456 | 509 | 54 | 2.2E-9 | ||
| ProSitePatterns | 463 | 475 | 13 | - | ||
| SMART | 484 | 512 | 29 | 0.0032 | ||
| ProSiteProfiles | 488 | 515 | 28 | 10.245 | ||
| ProSitePatterns | 493 | 505 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0381200.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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