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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0399900 |
| Transcript ID | LotjaGi2g1v0399900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sulfotransferase; TAIR: AT3G50620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P06236|NODH_RHIME Nodulation protein H; TrEMBL-Plants: tr|V7CFA1|V7CFA1_PHAVU Sulfotransferase; Found in the gene: LotjaGi2g1v0399900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:89704190..89708038) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTCTTTGAAACCCTAGTATCCTAAGAAACCAACATAAATATGTCTTTTTCCCCCTTGGAAAGAAAAATCCAGGTCTA GATTCAACAACTATTTGACTATATCCTATGTTTATTTTACCATTCATATTGTTCATGGGACTGACTACATTAGTTTACCG AATTGACACCCTTCTTAGCAATGAAACTTTTCCCATTGTATTCGTTCTAGTAACTTTTTCCTCATATGTGGGTTGCAGGA TATTCTTGTCATAAAGCCTCCAAAGAAATCGCCAATGTTATTAAGGACATCAGTCATGGTATTTTCGATGGTGTGCTGTA TTTTTATCTTCTCTGTATGTCTAAAGCAGATAAACACCCAAGCAAGGACTAAATTTGTGGACTTCAAAGTCATTGACAAC ATTTCTCAGAGTAGAGTGAAGGAAAAATATGTTCCTCACCTAGTACATTATCCCAAGCCGGTGTCCTTTAACAGGTATTG GTAGATTTCGGTTAATCATGATCAGTTGGATTTTGTTAGGAACTTATAGATTGTCTTGTTCTTTGTCAGGAATGAATGTG CTCATAATCCTGTCATGTTCTTTGCCATATTGTCAAATCAGAGATCAGGCAGCGGGTGGTTCGAGACCCTTCTCAATAGC CACATTAATGTAAGCTCAAATGGAGAGATATTTTCCGTTAAAGAGAGAAGGGAAAATGCTTCTTCAATTTTACAGACTTT AGATAGGGTTTACAATTTGGACTGGTTCAGTAGTGCTTCCAAGAATGACTGCTCTGCTGCAACTGGCTTAAAGTGGATGC TTAATCAGGTATATATACTTCCTGTCAAGTCTTCTGAGAAGTGTTATCAACAAATCCCCACATGTCTTGATATTAATGTT AGTCCACACGCTTGGGCAATTTGTGGCATTTTTGCTAAAGAGCCTGTTATGAAACTTTGGTTAATTATCTGTCAAGGTAT TGCGTATGGTTTTTGCTTGTGTTTATGATGAGTTTCTCTAGTTTTACATACATTGGCCTGAAGGCTGACAGATTGTCTGG ATTTTCCATTAAATTGTTCATAAGTAATTCCTTAAAGGGGTACAGCCTTGGCACAATGGTTGTAGTTATTATCATATGAT TGCCATGACAAAAGCTTTATAGTACCAGGATTCACTTTCGTTTAAAAGTCATTCCCCGGTCACCTCAAATCTTTTGTAGA ATATCACTTACCAATCATAACATGTTATAGTTCGCTAACTCATTGGTTGTAAATTAAATCCTAAAGTCTGTATTCCAAGT TCTTGTGAGTTTTTCTTTTGGTTATGGTTGTTTCAAGAAGAAGAAAAAGCACAGGTTTTGTTGTTTCTATTTGAGGCATA ATTTCCCTGTATATTATACTTAGACTGCAGTCAAATTTTATTCCCCATAAATCTCACTTAGATTTCTGCTGTGGAAAGGG TTTAAGTTAAAGTTAACCCCTGGCTCTTTAAATTTAAGAACATGTTTTCTCCCTCAGTATCTTTTTCTTTTGGTCTTTGG TGGGTGTAAACCCATTCAGGAAATTGTGGCAGTCCTTCCCAACATATGACTTTCTCAGGGTTTGAACTTGTGTGACCACC CTTATGGGAATCTAGTTTCCCTACCACTAGACCAACTCCTTGTTGGTTTTCTCACTCAGTATCTGGAATTTATATATCTG CTGTGAAGAGGATTTAACTTAAACTTAAACCCAGGGTCTTTAACTTCAAGAACACGTTTTTGTCACTCAGTATCTGTAAT CAACTGTTTTTCTCATTTGCTGACTACCAGTTGCAAGCATTGATATTATAGAACTACATAGCTGCACATGAATATATTAT GAAACGCAAAATTTGCAGTGCAAGTATTGTATCTGATAGAAGCTGTGACTAATTTTACCAAAAGGAGATGATATGTAGTG CATAATCCTAATGAGTAATTGTTATGTAAATAGAGTCAACTATGGGTGTATAGACCTTATCAACTTTGTGAAAATTTTAA TAGAACTGCTAACAGAAAGATTAGGGATCATAACATCTTGTGCTCAATATTTCCTGAGTACTGACATCTAATGTCAAAAT GATTTTAAAACACACAAACAGTCCCAATAAACTATACTTTTAAAATCTTGATATTTACGCACATGATTTGTTTAAGGAGT GGTGACTTGTTCACTTATGTTTTATAAATGAGAGGATGGCACTTATTAAGTATCACTGCTACTTATTACTGTCGAAGCTT TGCTCTACTGTATGATGTTTCACATGACATTGTGCCTTCTTCCAGTTCCCTAAGTCTTACTTTTTTTTTCTCCATCCTCC TCTTTGTGGGTATCAATAGTGCTAAAATTCAAGGATGCTGATCGGACAAATTTGTTTTGCTTATGTCTTTGACCTGCAGT AACCATGTGTTTAGAACACACTTCTGCATTTACTTCAGGAAACATAACAATGAAAACCTTCAGTAATATGCTTCTGGGTG GGAATTTTCTTATGGCTATAAGAATCGGTGGGATGTTGTCATATATGCTGTGTACCTGACACATTTACCTGCTCTTTCTT CCCTCTCTTTCACTCTGTTTACTTCCACCAAGTTTTTTGTTGATGTTTGATCTAATGTGGTATTATTAGTAAGTAATTGA AGAATCAATACATATATTTGTCCATGCAGGGATTAATGCAGCACCATAAGGAAATAGCAGAATACTTCAACCGTAGAAAT GTTTCTGTCATATTTCTTTTCAGGAGAAACTTACTTCGCAGGATGGTATCAATGCATGCCAATTCCTATGATCGTTATGC TAAGCTATTGAATGGAACACACAAGTCTCATGTACACTCTGCAGAAGAGGTATCTCCATATATTTTCCCTTGTAATTTTT CTTATATTCATGAAATGAAGCTCATATTTGGTCTTTCAGGCTGATATTCTTTCAAAGTACAAGCCATTCATAAATTCTAC ATCGTTGCTGGATGACTTGAAGGATATGGAGATGAAAGCTGCAAAGGCTTTAGAATACTTCAATAGCACCCGACACATGA TCCTTTACTACGAGGATCTTGTGAGAGATAACACAGTAAGTACCTCATCATAAATTCCTAAATCTTTTACCATTAAGCTG CAAAAAAGTTCATTCCAGAATGTGATAAGTCACCATTTAGGCATTCACAGTAATAACTTTTATATGATTCAAAGGGTACT GAAATTGATTTTAACTGTCCCAAGATATGATAATACAGGAATAGGAAGAAATTTCAATTATATTGAAACATATACGTTAA CCGATCCCCAACAGTCTTCCTGCACTCCCTTTTAAGGGTAAAGTTGGAATAGCTGTTTTATTTGGGCACGTTTGGGTAAA CAACTTAATTAAGCGCTTATGGTAAAGTATTAATCACATTAGCTCTTGTTCGTAAGCTAATTTTTTAAGTTTATTAAAAT AAGCTCAAAATTGCTTGTAGGTTAGTATAAGATCTTATTTACAAGCTAATCATAGCAATTTGCAAAAACTAGCTTCAAAC AGCTTATAGATTTGTCATAAGCCGTTTTCGTAAGCTTACCAAAAAACTTGCTTAAGCGCTTGTATATACTATATAGGATA AGCTCAAATAAGCTTTTCCAAACGTGGCCAAATTTTGACTTCTGATTTCATTATGGGATTCACTGTTTGTGTTTCTTGCA GAAGCTGAGAGATGTGCAAGAGTTTTTAGGATTGCCAGAGATGGAGTTAACAAGCCGTCAGGTTAAGATACATAGAGGAC CATTATCAGACCACATTAAGAACTGGGATGAGGTTAACAAGACACTCACAGGAACCATTTATGAGAGTTTCCTTGAAGCT GATTATTAG
CDS sequence (LotjaGi2g1v0399900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCTTTGAAACCCTAGATATTCTTGTCATAAAGCCTCCAAAGAAATCGCCAATGTTATTAAGGACATCAGTCATGGT ATTTTCGATGGTGTGCTGTATTTTTATCTTCTCTGTATGTCTAAAGCAGATAAACACCCAAGCAAGGACTAAATTTGTGG ACTTCAAAGTCATTGACAACATTTCTCAGAGTAGAGTGAAGGAAAAATATGTTCCTCACCTAGTACATTATCCCAAGCCG GTGTCCTTTAACAGGTATTGGAATGAATGTGCTCATAATCCTGTCATGTTCTTTGCCATATTGTCAAATCAGAGATCAGG CAGCGGGTGGTTCGAGACCCTTCTCAATAGCCACATTAATGTAAGCTCAAATGGAGAGATATTTTCCGTTAAAGAGAGAA GGGAAAATGCTTCTTCAATTTTACAGACTTTAGATAGGGTTTACAATTTGGACTGGTTCAGTAGTGCTTCCAAGAATGAC TGCTCTGCTGCAACTGGCTTAAAGTGGATGCTTAATCAGGGATTAATGCAGCACCATAAGGAAATAGCAGAATACTTCAA CCGTAGAAATGTTTCTGTCATATTTCTTTTCAGGAGAAACTTACTTCGCAGGATGGTATCAATGCATGCCAATTCCTATG ATCGTTATGCTAAGCTATTGAATGGAACACACAAGTCTCATGTACACTCTGCAGAAGAGGCTGATATTCTTTCAAAGTAC AAGCCATTCATAAATTCTACATCGTTGCTGGATGACTTGAAGGATATGGAGATGAAAGCTGCAAAGGCTTTAGAATACTT CAATAGCACCCGACACATGATCCTTTACTACGAGGATCTTGTGAGAGATAACACAAAGCTGAGAGATGTGCAAGAGTTTT TAGGATTGCCAGAGATGGAGTTAACAAGCCGTCAGGTTAAGATACATAGAGGACCATTATCAGACCACATTAAGAACTGG GATGAGGTTAACAAGACACTCACAGGAACCATTTATGAGAGTTTCCTTGAAGCTGATTATTAG
Protein sequence (LotjaGi2g1v0399900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFFETLDILVIKPPKKSPMLLRTSVMVFSMVCCIFIFSVCLKQINTQARTKFVDFKVIDNISQSRVKEKYVPHLVHYPKP VSFNRYWNECAHNPVMFFAILSNQRSGSGWFETLLNSHINVSSNGEIFSVKERRENASSILQTLDRVYNLDWFSSASKND CSAATGLKWMLNQGLMQHHKEIAEYFNRRNVSVIFLFRRNLLRRMVSMHANSYDRYAKLLNGTHKSHVHSAEEADILSKY KPFINSTSLLDDLKDMEMKAAKALEYFNSTRHMILYYEDLVRDNTKLRDVQEFLGLPEMELTSRQVKIHRGPLSDHIKNW DEVNKTLTGTIYESFLEADY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 5 | 340 | 336 | 1.9E-172 | – | |
| PANTHER | 5 | 340 | 336 | 1.9E-172 | – | |
| TMHMM | 19 | 41 | 23 | - | – | |
| Phobius | 20 | 41 | 22 | - | – | |
| Phobius | 42 | 340 | 299 | - | – | |
| Gene3D | 97 | 326 | 230 | 1.6E-27 | – | |
| SUPERFAMILY | 98 | 323 | 226 | 1.48E-17 | ||
| Pfam | 100 | 300 | 201 | 4.9E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Sulfotransferase activity | Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate. |
Expression pattern of LotjaGi2g1v0399900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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