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Field | Value |
---|---|
Gene ID | LotjaGi2g1v0418100 |
Transcript ID | LotjaGi2g1v0418100.1 |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT5G47070.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LTC0|PBL19_ARATH Probable serine/threonine-protein kinase PBL19; TrEMBL-Plants: tr|G7JYN0|G7JYN0_MEDTR Receptor-like kinase plant; Found in the gene: LotjaGi2g1v0418100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:91652477..91655547) extracted from Lotus japonicus Gifu genome v1.2.
GTGGTCTTCACTTCAGTCTTCATCATTCTAACTTTAGCAGTTCATTCATACACTCTTTTTTTTTTGTCCACATCTACGCG GGTTCACACTTCCCACGCGGTTTTTTTCTTTCTCATGTCATCATTGTATTTCAATCAATCTCGGTTTCTTTTTCATTTCT CTTCCACTTCAATTCACTTTCCTTCTGTTTCCGTTTACAATTCATCTTCATTTCTCTACCACCTCAACCTTTGTGAACTG TTTGTTCTGTTCCTCGGAGAAATTAGTGATTAGAGAATGAAGTGTTTCTTCTTCAAACGAATATCCAACGCCGACCCAGA TTTGAACCGAAGCAAGAAGAAAACTCAGGCGTCGAATCGACCCACCAGTGCGCTGTCATCGCCGAGGAGCGTAGAAGAAT TGTACAGAGAGAAAGAGCAGAATTTCAGAGTTTTTACTTTGCAGGAGCTCGTAGATGCAACAAATGGTTTCAACAGGATG CTCATGGTTGGAGAAGGTGGTTTTGGGAAAGTATATAGAGGAACCATTAGCCCTCTAAACGGACAAGGTGACCCAGTTGT GGTTGCAATCAAGAAACTTAACACGCGTGGCTTACAGGTATTAAATTATTCATAGTATAGTATTTGTTCAACATATGACT AGTTTATGCCTATGTAATATTCTATAGATGATATAATTGTTTTTATTGGTTTAGATGGCCATGAAGTACTATAATAGTCT AATAGTATATGTTGGTCTTCCATTGTTTAGGAACAATTCATATAATACTAATTTTGGAATGGATTCACAATTTATAGCAA TTTATAGCATGTTTGGATGAACGTCGCTTTTGATCAGAGTGAATTCTGATACCCAGAAGCTACTCATAACAGCATTTTCT CGTAATTGATTGTGGTTTTATTAGAAACAATGGTAGAAATATTTCCAAATTGTACTTGGAATGTTATGCTGACTTTGACT TAGGGCTGTTCTTGTTCTTTACAAAAATGTACCTGGTTTCTTATGTTTGTTTATTTTTTTCTTTTCCCCTTGTGAAGGGG CATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCATTGTTGATCACCCGAATTTGGTTAAGCTTTTGGGATACTGCTC TGTAGATGGTCGGAGAGAAATCCAACGGCTGCTGGTGTATGAGTTCATGCCCAATAGGAGCCTGGAAGATCATCTTTTCA GTCGTTCTTTCCCTCCCTTGCCTTGGAAAACAAGATTGCAGATCATGCTCGGTGCTGCTCAAGGATTGCATTATCTGCAC CACGGATTGGAGGTTCAGGTATACTCCTTGTTGCGAAACCTTTGACAATTGTTTACCATGTGCATGTTTGGATATCCTCT AAAGCCAAAATTAATAAATTAAATCTAGAGAGAAACTTTTGTGAGTAGCTTTCACGTGTCAGAATTGATTATGAGCTGAA CAAAAGATGCTGCATATCAATTAGCTTAGGTGAACAATATTCACAGGCACATAGTAGCATTCTTTAAGGTACCCAAACTG AGATTGTGACCCATAGTACTTAAAGAGACTGAGATTGTTTATTGTTTTTAATTTTTTTGGATCACACCTGGTGGGTGTTC ACAACTTCACATAACATTTTGTTTCTGTGACACTCATAGTAGTGGAGCTAAAGAAACATACATCCAAAGCCTAGAATGAT GATTTTAGATGATGTTGAATATTCTTAATGCAAATCAGATGCAAATACCTATTTTGGTGTTTAATTTTCTCTTGCTTTTT TTTACTGGAAAGGTTATCTACCGAGACTTCAAATCTTCAAATGTGTTATTAGACACGAAATTCCATCCCAAGCTGTCAGA TTTCGGTCTTGCTAGAGAGGGCCCAACAGGTGATCAGACTCATGTATCTACTAAGGTAAGTTGATGGTGAACTATATGTT CTCATGTGCTAATCAACATAATTTTCCTCACTGTTTAATTATACTACTATCTTTGTATAAAATCATTTTGCACCATTTCA AATGCTAGTTTCGGCTAGGAGAGCTAGCACCACAATGATATTGATGTTTGCGTCTTGAATAGAATCGTCTCCCGTGAAAA ATATATGTAATACACACACAAAAATGCTAGTTTTGACAATTTGACAACTAACTAGGGATGTTTGATGCATGACCAATTTA AGCAGCATTGGTTTGTTGCCTCTCTATTTATCTACAATCAGAATCATCCTTCTTCTAACAATATGTGTAAACCAATTACT CATCTTTTGTTATCAGGTAGTTGGGACTCGTGGATATGCTGCTCCAGAGTATATTGAAACAGGTCATCTCAGACTAAAGA GTGACATTTGGAGTTTTGGTGTGGTACTCTATGAGATCCTCACAGGAAGGAGGGTATTGGAAACCAAGCTTCCACCAGAG GAACAAAAGCTTTTACAGTGGGTTAAAACATACCCTGCTGAGAGTAGCAGATTCAGCATGATAATGGACCCGCGTCTCGC GAAACAGTATTCACTTGATGCTGCTCGGAGAATAGCCAAGTTGGCAGATAGCTGCTTGAAGAAGAATCCTGAAGATAGAC CCTCCATGAGTCAGATAGTGGAAAGCTTGAAGCGAGCACTGCAGCTTTCAGAAACCTCAAACAGTACTCAGAATATGATC ACTTTTCAATCCCCCAGATCTAAATTGACTCAAAAAGTTAAATAGAAGATTAGTTTTGTAGGACCAAAGAATGGTCAAAC TAGGAAGTCAGAGTTTTGTGGACTTTCCCATCTATGTTTCTGGACTTTGAACATTGTGGTTAGTTCGGTTCAGTGCCATA TGCCAAAATCCAAGTCGTGTCTCTACTTCATCAAACATTGGCTTTTATTTTTCACACAAGTTATCAACATTAGAGGAAAT GGAAAGGTCAATGGTCTCATGTGTTCGTAACTTTGATATGTTGAACACTTGGTTGAACAAGCAGAGAAACAGAATTTGAT TCAAAAATCAAAACCAAACATGAAGCCTCAAAGCACGATTGGTATGCAACACAAAATACCCCCACAGGCCCACACCTTGA TCCATACCAAATCAATTGTTTTTTTTTTTTT
CDS sequence (LotjaGi2g1v0418100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTGTTTCTTCTTCAAACGAATATCCAACGCCGACCCAGATTTGAACCGAAGCAAGAAGAAAACTCAGGCGTCGAA TCGACCCACCAGTGCGCTGTCATCGCCGAGGAGCGTAGAAGAATTGTACAGAGAGAAAGAGCAGAATTTCAGAGTTTTTA CTTTGCAGGAGCTCGTAGATGCAACAAATGGTTTCAACAGGATGCTCATGGTTGGAGAAGGTGGTTTTGGGAAAGTATAT AGAGGAACCATTAGCCCTCTAAACGGACAAGGTGACCCAGTTGTGGTTGCAATCAAGAAACTTAACACGCGTGGCTTACA GGGGCATAAAGAATGGCTTGCAGAAGTTCAATTTCTCAGCATTGTTGATCACCCGAATTTGGTTAAGCTTTTGGGATACT GCTCTGTAGATGGTCGGAGAGAAATCCAACGGCTGCTGGTGTATGAGTTCATGCCCAATAGGAGCCTGGAAGATCATCTT TTCAGTCGTTCTTTCCCTCCCTTGCCTTGGAAAACAAGATTGCAGATCATGCTCGGTGCTGCTCAAGGATTGCATTATCT GCACCACGGATTGGAGGTTCAGGTTATCTACCGAGACTTCAAATCTTCAAATGTGTTATTAGACACGAAATTCCATCCCA AGCTGTCAGATTTCGGTCTTGCTAGAGAGGGCCCAACAGGTGATCAGACTCATGTATCTACTAAGGTAGTTGGGACTCGT GGATATGCTGCTCCAGAGTATATTGAAACAGGTCATCTCAGACTAAAGAGTGACATTTGGAGTTTTGGTGTGGTACTCTA TGAGATCCTCACAGGAAGGAGGGTATTGGAAACCAAGCTTCCACCAGAGGAACAAAAGCTTTTACAGTGGGTTAAAACAT ACCCTGCTGAGAGTAGCAGATTCAGCATGATAATGGACCCGCGTCTCGCGAAACAGTATTCACTTGATGCTGCTCGGAGA ATAGCCAAGTTGGCAGATAGCTGCTTGAAGAAGAATCCTGAAGATAGACCCTCCATGAGTCAGATAGTGGAAAGCTTGAA GCGAGCACTGCAGCTTTCAGAAACCTCAAACAGTACTCAGAATATGATCACTTTTCAATCCCCCAGATCTAAATTGACTC AAAAAGTTAAATAG
Protein sequence (LotjaGi2g1v0418100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKCFFFKRISNADPDLNRSKKKTQASNRPTSALSSPRSVEELYREKEQNFRVFTLQELVDATNGFNRMLMVGEGGFGKVY RGTISPLNGQGDPVVVAIKKLNTRGLQGHKEWLAEVQFLSIVDHPNLVKLLGYCSVDGRREIQRLLVYEFMPNRSLEDHL FSRSFPPLPWKTRLQIMLGAAQGLHYLHHGLEVQVIYRDFKSSNVLLDTKFHPKLSDFGLAREGPTGDQTHVSTKVVGTR GYAAPEYIETGHLRLKSDIWSFGVVLYEILTGRRVLETKLPPEEQKLLQWVKTYPAESSRFSMIMDPRLAKQYSLDAARR IAKLADSCLKKNPEDRPSMSQIVESLKRALQLSETSNSTQNMITFQSPRSKLTQKVK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 2 | 357 | 356 | 5.4E-202 | – | |
PANTHER | 2 | 357 | 356 | 5.4E-202 | – | |
MobiDBLite | 15 | 38 | 24 | - | – | |
MobiDBLite | 23 | 37 | 15 | - | – | |
Gene3D | 25 | 150 | 126 | 1.7E-27 | – | |
SUPERFAMILY | 47 | 346 | 300 | 7.66E-82 | ||
ProSiteProfiles | 65 | 350 | 286 | 41.206 | ||
Pfam | 70 | 344 | 275 | 1.7E-47 | ||
ProSitePatterns | 71 | 100 | 30 | - | ||
CDD | 71 | 348 | 278 | 1.58572E-94 | – | |
Gene3D | 151 | 371 | 221 | 3.4E-64 | – | |
ProSitePatterns | 195 | 207 | 13 | - | ||
MobiDBLite | 357 | 377 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0418100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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