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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0421200 |
| Transcript ID | LotjaGi2g1v0421200.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acyl-coenzyme A oxidase; TAIR: AT4G16760.1 acyl-CoA oxidase 1; Swiss-Prot: sp|O65202|ACOX1_ARATH Peroxisomal acyl-coenzyme A oxidase 1; TrEMBL-Plants: tr|G7JXE0|G7JXE0_MEDTR Acyl-coenzyme A oxidase; Found in the gene: LotjaGi2g1v0421200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:91925148..91931891) extracted from Lotus japonicus Gifu genome v1.2.
AATAAAAATACATTTATATCGAAGTCGGAGAAGAGAAAAACTTTGGAAAATGCGTCCACGTTATCAACATTTTTCTTTTT TTAAACATTGAAATCATAAAGCCACTGCCACTGGTGAATATGCAGGCGCTACTATTTTCTATATCAAGATCATCACATCA CATTCACATTCACATTCACATTCACATTCACATTCACTCACTGCTACTAGAAGGTAGGTGTAGTAGTATATAATAGCAGC ATAGGTAGTTGAACATCACAATCTTCATTCCTCCTTCGAAACAAAATGGAAGGAGGCGTTGACCACTTGGCTTTCGAGAG GAACAAGGCGCAGTTCGATGTTGACGACATGAAGATCATCTGGGCCGGTTCTCGTTCCGAATTCGAGCTCTCCGATCGGA TTTCTCGCCTCGTCGCCAGCGATCCGGTTAATTTCCCCCCTTTCACTCAACATTTCTGCCAATTTGATTCATGCTTTTTC TGATCCCTCGCTAATTCCTGTGAAAAAAACAATTCAACTGTATTTATATATTTATTTTCTGATAATTGTTTAAAGAACTT GGTCAAAGTAACGTTACATTTTTATCTAGTTGGGTATTACGGGAATTTAGGGCCTCAGTGGATACTTAGATTTTGATAGA ATAATAATATGTTATTTATATAAAGTCAATCATGTGTGTTCCCCACAAAATTTGAGCTATTTGCTTCATATGAGAGTCTC TATGAGTGAATATTACCTTTATTATTTAATTAAAAAGTTTGATTTCAGCATAATGTTAGGTTGATTTTTTTTTTGATAGT AATGTTAGTAAATTAGTACATGACGATCACGGCTTGTTAGTTTGAATTCTGAATCCTTGATTGGTTGTATTTTCTAGGCT TTCAGAAAGGATGACAGAACCACGCTTGGCAGAAAGGACCTATTTAAGAACACTTTGAGAAAAACAGCTTATGCATGGAA AAGGATCCTTGAGCTCCGTCTTAATGGTGTGTCTTCTGTTCTTTGTGTTGTTTGCATTTGGTTTATAATGTTGAACAGCA CTCCCTATTACATCAAAATGTACCATTCTTTATCGTGTTGTCAGTTGTAATCTTACAGAAAAGGAAGCTGCCAAGCTTAG GTCCTTTGTGGATGAACCTGCTTTTACGGATCTTCATTGGGTATGATTTTATTTCTTGTCCTGGTTTCGTCTCTACCTTT CATGCCTTGTTTTATTGATATAGAAGGAATATGTAGATTACCATGATAAAAAGTGAGGGAATGGGATCATTTCTGCTGGG TGCAATATTAGTTTAAGGATTTCAAAGGATTAGCTTTATCTGCTTGTAGTAAATTTTAGCTGTTCATATCCTATTGCAGG GAATGTTTGTGCCGGCTATCAAAGGACAAGGCACGGATGAGCAGCAGCAAAAGTGGTTGCCTCTAGCTTACAAGATGCAA ATTATTGGTTGCTATGCCCAAACTGAACTTGGTCATGGATCCAATGTTCAAGGGCTAGAAACAACTGCAACATTTGATCC CAAAACAGATGAATTTGTTATTCATAGTCCCACTTTAACTTCCTCCAAAGTAAGTGAAATGGGTGATAATTTCTGAGAGC CTTTACCGGTCTTTTACAATGTAATTTACTCTTTCAGATTTTAGAGTCCTACAATCATGGAAAACTGTCGAACCATTTTA ATGCATTTCACTGAGTGTACTTGTTTGTTTTTGGATATACCATCACTCTTTTGTTGTTGATTTAAACAGTGGTGGCCTGG TGGATTGGGTAAGATATCAACGCATGCTGTTGTGTATGCTCGTCTAATTACTGATGGTCAAGAGCAAGGAGTGCATGGTA ATTTCCAAACTTTATCATCCAAGTTTCTGGTGTTAGAATCAGACATTTATTGATTATATATGTCCAATATGAAGGTTTCA TTGTCCAGCTGCGGAGCTTGGATGATCACTTACCTCTTCCAGGCATTACTGTTGGTGATATTGGAATGAAATTTGGGAGT GGAGCATATAATACCATGGATAACGGGGTTCTAAGATTTGACCATGTTAGAATTCCAAGGAATCAAATGTTAATGAGGTA GTTCAATTTTACCTATTTGTCCACTCTAGCCTCACTAGAAGAAAATCCAACAATTGTAATTGGGGATTTCGTGGTGTATA GTATATAATAAATGAATGATCTTTGGAGGCAAAGTGACTGAAGTTCAAACCACAATTCAGTATACTTGTATCAGTTGAAT CCACAGGGTGGTAAACTGAATCTAATTCTAATAACAGTATTGACAAACACGACAACAATAACAGTATCTGGTTTGCTTAA GGTATTTTGTCTATGAATTGAGAACAATACTCTGGCTCATTTTCTTACTTTTAATCAGGCAAGCTATTAAATTCCTACTT AGGAGTAAACCCTAAACCGTAATTGAAGGTTGAAATTGCTACATGATTGGTTTCATTTTTTTTTTCTGTTGAATGCAATT GGTAATGGGTTTCCTTTCAGAATTATTTTCATGGGTAAACTGTAAACAAATGATGATTGAGAATAACAGACGGGAATGAA GGGTTGTGTTCATCCTGTGTATAGCTCATCACTCCTTTCTGATGGTTAGGGGGCATGGAGTTCTGTCATGAATCAAGCAT ATAGTAACAGGAATTTTCAATAATTATAAATGTCACGATGTGCTTGTCATAAAGCTAGCATGTAGTAACATGACTTGTCA ATCACTATAAATGTCAAGGTGTGCATGTTAGTTTTGCCAACAGATTAATGGTGTTTTGTTTTTAATCTACCAGGGTCTCT CAGGTAACCAGAGAAGGAAAATATGTGCAGTCCAATGTTCCAAGACAATTAGTTTATGGTACCATGGTATATGTGAGACA AGCAATTGTGTCTGATGCATCGATTGCTTTGTCACGAGCAGTTTGTATTGCTACAAGATATAGTGCTGTTAGAAGACAGT TTGGATCACATAATGGTGGTCTTGAGTCGCAGGTTAGCTTTAAAACCTTTTATTGATGCAGAATTGTTGCATGTTGGAGA ATTCTGATTTTATTGAGATGTTCTAATGGGGATATCTTTTTCTAATAAGCAAATTTAAGAAACAAAATGGAGGCTGAATC TGAAATTACAGTGCACAAAAAAATAAGCCAATTTACCTTTATTTTAGGTTGCATTCATGAAGGTTTGCTTTTTACCAGAA CATGTTTTTGTTGAACTTATAGTGGGAAGGTTGATGGGATTTCTCCTTATGCTTGGATTTACATTCGTTGTTGAATGAGT GTCTTTGTGCTCTCTGTTTCTATTTAGGTGATTGATTACAAGACACAGCAGGCTAGGCTCTTCCCTTTGCTAGCTTCTAC TTATGCTTTCAGGTTTGTTAGTGAGTGGCTGAGTTGGCTTTATACGGATGTCACACAAAGATTACAAGCTGGAGATTTTT CAACATTGCCTGAGGCACATGCATGCACTGCTGGATTGAAATCATTGACTACTTCAATCGCTGCTGTATGTTATTACTTG AATTCATTTTTCTACCGTTTGACCTTAGTGAATTTAGCTAATTTTAAGCTGTTTAGATAACATTTTTTGGACACAATCTT TAGATACTATTTAAAACATTGTTTATTATTTCATGTTGAGGTCTTTTTTCTATGTTGTGCTGTTCTTTAGGTGAATTGGC ATTAATGAAATTTTACGGCTTTTCTCTCTCTATATATATTGAATCTTAGTTCCTTTCTGTGTGCCTTATGCAGTTCATGT TGTTATTTGAAATGTTAATGTTTTGAAATGGGTGGTTGTCATTGTGTATCAATGTTAAAACTTTCAAATGAATTGTCTAC AGATTTTTAACCATGATTGTACATGCATATAATCCTCCATCCCATTTGTTTCCAGTTTTAATTTTAAAGTAAAATTAATA CGACAGAGCATAGCATGTTGTGGTTTATATATGATGCAAACATTTGCCGAACATAAACAAATGTTTAGAGGAGCCAAAAT AATATTTTAATGCACAAATATAAGAATGTGTGTATAGATATGTTTATATATCTGTTAGGATATAGTTTGTTGACATAATA TCTCAACAATATATATATACATATATATATATATTATTTTTATAAATAATTAATTATGCATATATAGTTTTAAAAAAAAA ATTACGCATATATAACCTTTTAAAAGAAAAAATATCCGTTGGAACCATGGCTCCCCGTCATTGAAATATCCTTCTTTTGC TTGCAAGATCAATTATGCATCATATTTATTTCACTATTCTGTAGTCTGTACTTCCACCGAACCGCTTAATTTTCCTGGAA TGCTGGTCATTATAATCTGTTACCATTAATTTATTATTCATGTCATCTATTTCTACGTGGGGTAACTGCCTGGATGATTA TTTTTCTCCTTGTTTAAATCGTTTAACTGTTTCTTTTGTTGTTAATGTGCTATTATCCTTTGATGGTATCTTACTATATG GATTTCATTTTATAACTGTGATCTTTTCAAGTTCAAATAATATTAAATTAACTTGATATTGCAGGATGGAATTGAAGAAT GTCGTAAACTATGTGGTGGTCATGGTTATCTTAATAGCAGTGGTCTTCCTGAGCTATTTGCAGTGTATGTTCCTGCTTGC ACTTATGAAGGAGACAATACTGTGCTGCTTTTACAGGTTACTTGAATGCTAAATATTTTGCATTTCATTTTGTTTATCAT TATATAATGTATCTTTACAATTTCCTTCGTTATCTTGGTTTGTTTTGACATCTAGAAATTTTCATGTAGGTGGCAAGGCA TCTTGTGAAGACTATTTCTCAGCTGGGCTCTGGAAATAAGCCTGGTGGTACTACAGCTTATTTGGCTCGAGTGGAACAAT TGATGCAATATCACTCTGATGTTAAAAAAGGTACCATGAAATTGGATAATATACAATCTTAAAAGATCTTGTGATATCCA AGTCAAATAGGGTTTCAATTAAGATTACTAAGTATGTGATAGGCTGAATGCTGATATTTGGCCAAGGCCATCTAAGGTTT ATGTTAGAAAAAATAAAAGGCAGTCTTGATATATCACTATATTTAGTTATAATTTATAAGGCTGTAGTGTCTTGTATGTG GTTGATACTGTTTAGTATCAGAACTCGGTTATGCTTTTATGTGTTGTAGTAGGGTAGTTATGTTTTTATGTGGCAGTTAA TGCTTTTATTAGGTGATAGGTATTACTTAGTATTGGGAGGGTGTTGGTTGCAGTGAAGTTATGATGTTTGCAGATTGTAC TTCTGTTATATTCAGATCTGGTGGTATATATACCCGATTGATTCTCTAATGAATATTCTGGATGCTGTGTTTAAATTACT GAGTCCAGCACTATGCCTGTGTCCTTTGAGTTGCAATTTTATACTTATTCTGCTTTTGATTTCTCGCAGCTGAGGATTGG TTGAAGCCTAATGTAGTGGTGGCAGCATTCGAAGCTAGGGCTGCTAGGATGTCTGTTGCTTGTGCTCAAAATCTTAGCAA GTTCACTAATCCTGAAGAGGGTAAGTGATTCGATTTTGTTCAACTCAAGCTATATTTTGTCTATTGTAGTTTAGTTTCCT TGACTCTATTGGAAATCACCTGTCTAAAGGCAGGATACTGGTTTCTGACACGTTTGGAGGAATAGTTTGAATATGTAGTC CTGTAAAAAAATATTTTTTGCGTACATTACGTTTGTATATATTAAATACAGTGTAAAACTCACATTTCTATTAAGATGAC ACACACACACATAATGTAGAAAAGTGTTGATTTATTATTGTAATTTGTGCAAAGTGGTTGAATATTTTGTTATTTTATAA TGGATTTTCTGGAAGTAGGTTTTCAAGAACTTACAGCTGATCTAGTTGAGGCAGCAACTGCTCATTGCCAGTTAATCATT GTTTCCAAGTAAGCTTTTTCCCAAATTTTACGCCTCCATTGTTTTTAATTAGCTTATGATTGTTATCTGTATTAACTTCA TGTTTGCATCTGGAAAGAGCAAGTCTAATATATTCTAGAGAAGCATAGTGGGAGTAGTTCAAAAAAAAATATACAGTTTA GTTGTGAATTAGAATTCTATGCTTTAAACTATGATTTGTTGGAATATTAGTACATTAAAACCCTGTGTTTTTTCAGATTT ATTGATAAGTTGCAGAAAGACATACCTGGAAAGGGTGTGAAACAGCAATTAGAAGTTCTTTGCAGCATTTATGCTTTGTC TCTTCTTCATAAGCATCTGGGAGATTTTCTTTCCGCTGGCTGCATAAATCCACTACAAGGATCACTTGCCAATGAGCAGC TGAGGTCCTTGTATTCCCAGGTTTGTCCAAACATTTTCCAGTCTATAGCATGTTTGAAAATATTTCTTCAATTGATTGTG TAGTCAAAATCAATTATGGGGAGAAGAGTAGTTTCTGAAGAAGAATAAGATGAACCAAACATACTATACATCACTTACTG GTTTCTCTTAACTTTATTACATGAAGGCTGATGATTCATTTTATGTGTGGTTAGGTTCGTCCTAATGCAATTGCACTTGT TGATGCGTTTAATTACACTGATCACTACCTTGGTTCGGTTCTTGGGCGCTACGATGGTAATGTGTATCCCAAGTTGTATG AGGAGGCATGGAAGGATCCTTTGAATGACTCAGTTATTCCTGATGGCTTCCATCAGTATGTTCAACCAATTCTTAAGCAG CAACTGCGTAATGCAAGACTATAG
CDS sequence (LotjaGi2g1v0421200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGTCCACGCGTTGACCACTTGGCTTTCGAGAGGAACAAGGCGCAGTTCGATGTTGACGACATGAAGATCATCTGGGC CGGTTCTCGTTCCGAATTCGAGCTCTCCGATCGGATTTCTCGCCTCGTCGCCAGCGATCCGGCTTTCAGAAAGGATGACA GAACCACGCTTGGCAGAAAGGACCTATTTAAGAACACTTTGAGAAAAACAGCTTATGCATGGAAAAGGATCCTTGAGCTC CGTCTTAATGAAAAGGAAGCTGCCAAGCTTAGGTCCTTTGTGGATGAACCTGCTTTTACGGATCTTCATTGGGGAATGTT TGTGCCGGCTATCAAAGGACAAGGCACGGATGAGCAGCAGCAAAAGTGGTTGCCTCTAGCTTACAAGATGCAAATTATTG GTTGCTATGCCCAAACTGAACTTGGTCATGGATCCAATGTTCAAGGGCTAGAAACAACTGCAACATTTGATCCCAAAACA GATGAATTTGTTATTCATAGTCCCACTTTAACTTCCTCCAAATGGTGGCCTGGTGGATTGGGTAAGATATCAACGCATGC TGTTGTGTATGCTCGTCTAATTACTGATGGTCAAGAGCAAGGAGTGCATGGTTTCATTGTCCAGCTGCGGAGCTTGGATG ATCACTTACCTCTTCCAGGCATTACTGTTGGTGATATTGGAATGAAATTTGGGAGTGGAGCATATAATACCATGGATAAC GGGGTTCTAAGATTTGACCATGTTAGAATTCCAAGGAATCAAATGTTAATGAGGGTCTCTCAGGTAACCAGAGAAGGAAA ATATGTGCAGTCCAATGTTCCAAGACAATTAGTTTATGGTACCATGGTATATGTGAGACAAGCAATTGTGTCTGATGCAT CGATTGCTTTGTCACGAGCAGTTTGTATTGCTACAAGATATAGTGCTGTTAGAAGACAGTTTGGATCACATAATGGTGGT CTTGAGTCGCAGGTGATTGATTACAAGACACAGCAGGCTAGGCTCTTCCCTTTGCTAGCTTCTACTTATGCTTTCAGGTT TGTTAGTGAGTGGCTGAGTTGGCTTTATACGGATGTCACACAAAGATTACAAGCTGGAGATTTTTCAACATTGCCTGAGG CACATGCATGCACTGCTGGATTGAAATCATTGACTACTTCAATCGCTGCTGATGGAATTGAAGAATGTCGTAAACTATGT GGTGGTCATGGTTATCTTAATAGCAGTGGTCTTCCTGAGCTATTTGCAGTGTATGTTCCTGCTTGCACTTATGAAGGAGA CAATACTGTGCTGCTTTTACAGGTGGCAAGGCATCTTGTGAAGACTATTTCTCAGCTGGGCTCTGGAAATAAGCCTGGTG GTACTACAGCTTATTTGGCTCGAGTGGAACAATTGATGCAATATCACTCTGATGTTAAAAAAGCTGAGGATTGGTTGAAG CCTAATGTAGTGGTGGCAGCATTCGAAGCTAGGGCTGCTAGGATGTCTGTTGCTTGTGCTCAAAATCTTAGCAAGTTCAC TAATCCTGAAGAGGGTTTTCAAGAACTTACAGCTGATCTAGTTGAGGCAGCAACTGCTCATTGCCAGTTAATCATTGTTT CCAAATTTATTGATAAGTTGCAGAAAGACATACCTGGAAAGGGTGTGAAACAGCAATTAGAAGTTCTTTGCAGCATTTAT GCTTTGTCTCTTCTTCATAAGCATCTGGGAGATTTTCTTTCCGCTGGCTGCATAAATCCACTACAAGGATCACTTGCCAA TGAGCAGCTGAGGTCCTTGTATTCCCAGGTTCGTCCTAATGCAATTGCACTTGTTGATGCGTTTAATTACACTGATCACT ACCTTGGTTCGGTTCTTGGGCGCTACGATGGTAATGTGTATCCCAAGTTGTATGAGGAGGCATGGAAGGATCCTTTGAAT GACTCAGTTATTCCTGATGGCTTCCATCAGTATGTTCAACCAATTCTTAAGCAGCAACTGCGTAATGCAAGACTATAG
Protein sequence (LotjaGi2g1v0421200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRPRVDHLAFERNKAQFDVDDMKIIWAGSRSEFELSDRISRLVASDPAFRKDDRTTLGRKDLFKNTLRKTAYAWKRILEL RLNEKEAAKLRSFVDEPAFTDLHWGMFVPAIKGQGTDEQQQKWLPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPKT DEFVIHSPTLTSSKWWPGGLGKISTHAVVYARLITDGQEQGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGSGAYNTMDN GVLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQAIVSDASIALSRAVCIATRYSAVRRQFGSHNGG LESQVIDYKTQQARLFPLLASTYAFRFVSEWLSWLYTDVTQRLQAGDFSTLPEAHACTAGLKSLTTSIAADGIEECRKLC GGHGYLNSSGLPELFAVYVPACTYEGDNTVLLLQVARHLVKTISQLGSGNKPGGTTAYLARVEQLMQYHSDVKKAEDWLK PNVVVAAFEARAARMSVACAQNLSKFTNPEEGFQELTADLVEAATAHCQLIIVSKFIDKLQKDIPGKGVKQQLEVLCSIY ALSLLHKHLGDFLSAGCINPLQGSLANEQLRSLYSQVRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLN DSVIPDGFHQYVQPILKQQLRNARL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 3 | 660 | 658 | 3.4E-217 | ||
| PANTHER | 5 | 661 | 657 | 0.0 | – | |
| PANTHER | 5 | 661 | 657 | 0.0 | – | |
| SUPERFAMILY | 9 | 264 | 256 | 6.94E-53 | ||
| Gene3D | 18 | 133 | 116 | 8.9E-42 | ||
| Pfam | 18 | 133 | 116 | 8.7E-32 | ||
| Gene3D | 134 | 270 | 137 | 3.4E-61 | – | |
| Pfam | 135 | 247 | 113 | 1.1E-11 | ||
| SUPERFAMILY | 277 | 460 | 184 | 2.69E-58 | ||
| Gene3D | 280 | 450 | 171 | 4.3E-65 | – | |
| SUPERFAMILY | 465 | 658 | 194 | 9.84E-56 | ||
| Pfam | 481 | 657 | 177 | 1.1E-52 | ||
| Gene3D | 481 | 609 | 129 | 1.3E-45 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Acyl-CoA oxidase activity | Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + hydrogen peroxide. | ||
| Cellular component | Peroxisome | A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism. | ||
| Biological process | Fatty acid metabolic process | The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis. | ||
| Biological process | Fatty acid beta-oxidation | A fatty acid oxidation process that results in the complete oxidation of a long-chain fatty acid. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and occurs by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A; the cycle continues until only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively). | ||
| Molecular function | Oxidoreductase activity, acting on the CH-CH group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Molecular function | Flavin adenine dinucleotide binding | Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. | ||
| Molecular function | FAD binding | Interacting selectively and non-covalently with the oxidized form, FAD, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. |
Expression pattern of LotjaGi2g1v0421200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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