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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0429000 |
| Transcript ID | LotjaGi2g1v0429000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 1-aminocyclopropane-1-carboxylate synthase; TAIR: AT1G62960.1 ACC synthase 10; Swiss-Prot: sp|Q9LQ10|1A110_ARATH Probable aminotransferase ACS10; TrEMBL-Plants: tr|I3S0G4|I3S0G4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0429000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92616788..92624839) extracted from Lotus japonicus Gifu genome v1.2.
AAGAGCTCTTTTACACAGCCAATGTGTGCTAGTTATATATGATAAAACAAAATCACACTCAAATCCAATCAAATGATTTC TTATCATTGTTTTCCAATTCTACCAACTGTAAAAGGAATACAGATAGTCTCACAACATGTAAAATAAAATTAAAATAATA ACTTGTTCCATGATTACTAAGAACAACCACAAAAGTCTTGTCTTATCCCACTAAGTGTAAGTGAGGTAGGCTAAGACAAC AAACTCGCAAGATAAAATATAGATTTCAGCTTATTTCAATCCTTAAAAAAGGTGATCCATTTGTGCTCTTGAGTGTCAGC TTGATTCTCTTTAACAAGAAATTATATGAGTGCGTGGTTTGGTTTCTCAGACCCTGTTCTCCCCCTGCTATGCAATCAAT CCTTCACCATGGTTTCCATTCCAATCCCCTTACGCCGTCTCCATCATTATTGCAGCCTTCCATTTTGTCATCTTCTCCAA AATCAATCACACCCGTTGTGCCGTGTAAACATAATCAGCGGGGCCCATGGCTATTCTGCATTTTCACGCCAACCATCCAA ATGTGCGAACACAAACAATTTCTAACTGATAGAAAGAAAAGCAAGAGGGTCATATTGGTGGAAAGTGTTTGGATGTGGAG AAGAAGAATATCCTGAAAGAGGGCCCATGCAGACAACAAGAGTCGAGTGAGTTTCATTCAAGATTCACGTACGTTTCCCT CTCATCCTTCGTTTGTGGTTCACACTCTTCTTCTTCTTCCTTTCATTTTTATTCATATTCTCTATCCTTCTTCATTGCAA TAATCACTCTGCAATGAGATGAGAGTGATTGTGCCATTGCAAGGAGTTGTGCAAGGCACAGGTGGTCTTTTCTGGGGTTC CGTTATTCCTTGTGCTCTCTTCTACTTTCTTCAGCTCTACTTCAGGAACCGCCACCAACCTCACCCTCCTAGCCCTCCTC TGCTTCCCAATCAGGAGGTTTCTGCCGCTTTGCACCGCAGTCTCTCCTCCCCCAGGACTGCCACCGCCTCCGCTCATGTA TCCACTCGAGCCAATTCCCTAAGTGTAGATTCTCCTTACTACGTTGGTTTGCACAAGGTCGCTGATAATCCATACCACCA AGTTCATAATCCTACTGGTGTTATTCAGCTCGGCTTGCCCCACAACACTGTCAGTTCCTCTCTCTTTTCTTCTCTTCTCT TCTCTTGTTTGCTCTTCACAACTACTTCAACTGCGAATTTCTGAGTCTTCTCCCTCTGTGTGTAGCTATGTGCGGACTTG ATTCAAGATTGGATTCGCCATTATGGAACCGCCACTATTATGGGGACACCAACTAATTGCTGTGGACTCAGGATCGCTGG CCTTGCACCTTGTCATGGCCTCATGGAGTTTGAAGTGGTAATTTTTTTCCAAGGGAACCAATATGACAACAGGGGGATTT TAATCATCCTCATACTTTTATAACCATGCAATATCGTGTTGAGACAAATAGATATGGACGAATTTTGTTTTGTGCTATAT GTCTTTTTACATTGGTTCATTTTATCTTAATTTTTTTTTTGTTTGGTTTTGGATGTATATATATGTGGATGCTTAACTAT TTTGGGTACATGCTTTTCATCTGTTTTTTAAAATATGATTCTTGCTATAACAAGGTTAGACAATCACTCTTGGAGTCTTG GTAGTTGCTTTATTAGTGTTTTTTTAACTCGGTTCAGTCTCATTTTTATATATAAATAAAATTGAACTGTTTATCAGAAC ATGTTAAACCTTATAATGATTAATTCAGTTGATTGAACCTATGAAAGATGCCATGATCCATTATCAGTGTGATGTGGTAT TGCACAATTGTGGTGTGCATAACATATTTGTGCAAGATGTGAAATTAGTCATCTCAACCTGATCTGCACTTGCTACTTAT GCACGCCACACCCGCATCCTCTTGAAATTGATCTTTTATGTTTTTACTAAGTTCTCTAATACTGCAGGCTGTGGCTGAAT TCATGTCTCAAGTTTTGGAAAAGCCAATTTTCTTCAACCCCTCACAAATGGTACTAACTGCAGGTGCCGCCCCTGCTATC GAGATTCTAAGCTTCTGCTTAGCAGATAATGGAAATGCATTCCTTGTTCCCACGCCTCATAGTCCTGGGTAACAATTAAT TTCCAATCTCCAAACTCCCTCATTTGTTACCTGCTAGTATTTTCTCCCAAGAAAAGAAAAAATGATAGTTTTGAATACAT GGTGCAGCTTTGACGGGGATGTAAAATGGAGAACTGGTGCGGTTATAGTACCTGTTCCCTGCCGCAGCACTGATAACTTC AATCTAAGCATAGCTGCACTTGACCAAGCCTTCAACCAAGCAAAGAAACGTGGTCACAAAGTTCGCGGAATTATAATAAC TAACCCCTCAAATCCAGCTGGAAAATTGTTGAATCGGGAAACACTACTTGATCTTCTGGACTTTGCAAGAGAGAAGAACA TTCACATAATCTCTAATGAAACGTTTGCAGGCTCTGTTCATGGAAATGAAGAGTTTGTGAGCATGACCGAAATCGTGGAA GCAGAAGTTCATGATCGGGACAGAGTTCACATAGTGTTCGATCTATCAAATGAGCTCTCTGTTCCAGGTTTCCAGGTGGG TGTTATCTACTCCTATAATGAGAATGTCTTGGCTGCTTCCAACAAATTAGCAAGGTTCTCAGCTGTTTCTGCTCCAGCCC AGCGATTGCTTATCTCCATGCTTTCAGATACAAGATTTATACAAACATTCATTGAGACTAAGAAACTGAGGCTGAGGAAA ATGTATAATGCATTTGTGGCAGGATTGAAGCAGTTAGAGATTGAGTGCACTAGGAGCAGTGGTGGTTTTTGCTGCTGGGC TGACATGAGCAGGTTAATCCGCTCCTACAGTGAAAAGGGGGAGCTCGAGCTCTGGGATAGATTGCTGAATGTAGCTAAGA TCAATGTTACCCCTGGATCCTCTTGTCATTGTATTGAACCCGGATGGTTCAGTTTTTGTTTTACTACATTGACTGAAAAG GATATTCCAGCAGTAATGGAACGGATTCGGATGATTTCTGAGATCACAAAATCACATAGTTGATATGGCGTCAATTACTT CAGCAAATTTAGTTGGTTTACTGATTCTTTATTCTTTTGGTGAAGCCGAATTCATCCCAAGGATGTAATCAATCATCAAG GGGTGGTTGGATGACCAGGTTTTAGGGAATGTGATGGAGTTGCTTCAAAATGATAAGTGTAAATTAGGACTTTGTATTAA GAAGCGGCTCCACGGGTGACCACTCTGCACGACCCGAATTTAGTTATTTGGATATAGCAGTTATTTTCCCGCCTTGATTT TGTTACATTTGCTTTTATTTATCAATGTAATTACATATCCTTCAAGCTTTGTAATTACATATATGGATATATAGAAATTA TTAAATATTGTGTGTAAATAATTGAAAAAAGGCTATCATGAAGTGTTTTCCCTCTCAAGTTTTGAGACATGTTAATAGTA TCTTCTCTGGGATGCTGGTAGTTGTTTTACCAGAAGTGCTCTTTGTGAATGCGTCAATTTTAACTTCCAGGAGAACCTAA GCAAAATTGGTTTTATCTGTTTAGCACTTGATGATTAGTGAGACTACAATTTATGAGGCATCACCATATCATACAAACTG ATAGTAATGACGGTGAAATACTTTAGTATCAATTCTGGTTAGAAGCTGCAAGTTTGAGCTTCCAAGTAAACATGTCTTGA ACTATGTAGAAATTGTAAAATCAAAATGTACTGAGCTAGAGGACATGGTCTTCATAGGAAAAGACTGTTTGTATCATGTA GAATATAACAGACTATTTATGTTTTCCAGTCAAGAGAATGGGGACTCGATGTTCTGCATGGAGGAAAATCATAAAGAACT CATCATGGCTACAGGCTAAGATGAAAGTTGTTCTAGTTAAGCACGATATGCATAATTCCGGAATCCATAATCCTCAGTCT GAATTGATGCGAGAGTGATATATTGCTAAAGAAAGTGAATTCAAGAGAAACTATTGAACACACAACACAATGGAATAAAC AAATGCCTTTTATTGAAAATATTACAGACTTTACAGAAAAAAAATGGGTAATATAAAAATGAATTCAAAAGAATTTTTGT CCTTTTTTTTCTTTCTTCAGTTCTGAATACCTAAGTAACAGCCTTTCACCTCCCCCCTCTTATCCTTTTCATTCCAAATT TCCTTCCATGTATGCTCTATCTGATACCCCTACTTTGCTAGAAGAACTTATCAAATTAATCAATTACTTAAATTTTGAGA AGCATGGAAAAGTACTTACTGGTTAATGGGATTCCAATCCATTTCTAATGGACTCAAGGACCTGGACAACCTCAGCCATG CTTGGTCTCCTTAAAGGATCCTCCGAAGTACAAATTAGCCCCAATTTCATAACCTGAATCAATTCATTCTCAGCAAAGCC TACTAAATTTCTGTCAAAGCAATTTGAAGCTGAGCCAGTCTCCAACAAACCTCTTACATATTCACACAAAACCACCACCT CATTTGAGGTTGGACTTTCAACTGGCTTTCTCCCTGTAACCAGCTCCAAAAGAATGACCCCGAAACTGTAAACATCACAC TTCTCACTCTGCCTCATGCTCTGAGCCAACTCAGGTGCAACATATCCAACAACATTGTGAAACTTGGTCAGACCATAATT ATCCAAAATGGGAAGCAACTTTCCCAATCCATAATCAGACAACTTAGGTTCATACTTGTCATCCAAAAGTATGTTAGAGG ATTTAATGTTGAGATGAAGAATCGGAGGTCGACAATCATGATGGAGATAGGCAAGGGCTCTAGCAGTTCCAAGTGCAATT TGGAATCTATGAGACCAATGTAATTTCCTATTACCTCTGCTAGTGCTTGTTCCAGGATAGCCAAACCCATGCAGATTATC ATAGAGGTTCCCATTTGGGACAAACTCTGATAGAATCAATTGCATTGAAGAGGACCAGTAGTAACCTTGGAAAGCAACCA AATTAGGGTGTTGAAGATTTCCTAGCCGCCCGATTTCATGTTCGAATTCCTCCTGATTTCTAATCCTTCCCAAACTCTCG AGCTTCTTCACTGCAATTGAGACGCCACCTTCAAAATCAGTTTTGTAGACTGTACCAATTGATCCCCCACCTATCAGAGA CTCCTTGTCAAGCAATGCTTTGGTACCCGCCTCCCAATCTTCATATTTTGATGGTAAGCTTTTGCTGAAGAGAACCAGCT TTCCAATTATAACATTTGATTCTGTTGACCCAAGAGGTGTGCTCTCAGCAATCATAATCTGGTCATCATCTTTTTTCCTG TGTCGAGCCTTAATATTCATGATGGTCACCAAGCAAACCCCAGTAAGAATTACAGCTGCAGCAACAATTGCAACAATAGC AGAGACACTGAGAACTTTAGTCTTCTTGCCAGGAGCTGACGGTGGTACAGTTCCGTTTGCTGAGCAAGGGGTGTCCAAAG GAGGACCACAGAGAAAAGGATTATTGGAAAATGCAGATGCATCAAAACGCTGTATGTTAGCAACATCAGGAATGACACCA GAGAGATTGTTGAATGAGAGATCAAAATGTGTCAATTTTTCTAATTTTCCAAGGGAAAGAGGAATTGAATCAGACAGTGA ATTATGTGACAGATCTAGGTATTGGATCCTTGATAGGTTTCCTAGGCTTGGTGGAATGCTTCCATATAGCTGGTTATGAT GTAGGTCAAGAGCTTTCATATTTGTCATTTTGTAAAGGGTCTGAGGAATCTCACCCTCCAAGTTATTACCAGAAACATTC CTGCAGCAACATATAAAACAAAAATATGAATTTAGATTTGTTTTGGAGGTTCAAGTTAATGTACAGCATTTTGAGAAAGT TACAGTTACTCACAGCTCAAGAAGAAACTTGCAATTGCTTATATCAACTGGAATTTCTCCATTGAGGTTTAGATTCTGCA AAGCCAGCAATTCAAGCAGCTCAATGTTGCCAAAACCCTTGGGAATCATTCCACTGATAGAATTATTCCCCAATTTGATA ACCAACAGCCCTCTCAATTCCTGAATATTAACTGGGATAGTCCCTTTCAGCCTATTCAACTCCAAGTCCAAGAGCTTCAA GTTCTTGCATCTAGTTATGCTGGAGGGAATCTCCCCATCCAAATCATTCCCTGAAGCATCAAAGATTTCCAATCTCTCAC TACATGAAGTGATCTCAGGAATCTGTCCTCTAAACCCATTGTAAGATACATTGAAGTAGGTAAGATTTTGCATTCCAAGG ATGCCAAATGGGGCCAAATCAGAGAATCTATTACTACCAAAATCCAACAGCATGAGACTTTTGCATGCTGAAATCTGCTC TTGCACACTCCCTGATAAGCCATTGCTTCTCAGAGACACATATGATAACCTTGGAATGCCACAAATTCCTGAAGGGACAA CCCCACTGAGATTGTTGAATGAAAAATCAAACCCTTCAAGGTTGGAGCAATTCACCAAGGACACAGGAATTGGACCAGCA AGATTGTTATGAGAAAGAGAAACAAACCTGGTTTTGTAGCAGTACTTAAACAAAGCCAAAGGTATCACCCCAACAAAGCC ATTTTTTGACAAATCTAGAAACCGAATGTTAGGCAAATCACCTATGAACTCAGGGATCGAACCAGATAACGCATTGGAGC TGAAATTGATCTTCCACAATGACTGAAGATCAGCAAATTCTCCTGGAATACTACCCGAAAACCGATTCCCGAACAATGTC AAAATCCTCAACCTCTTCAACCCTGATAGAGCAGGGGACAACACCCCACCTAAGCTAGTGTTCCAAAGAACAATTCTCTC CACAAACCCTTCAGAGTCACAGGTAACACCATTGAAATTCTGGCAAGGGTCTCCACTAGAAACCCACGAAGTCAAACTGT TGTGTGGATCTTCTGTGACATTTCCCTTGAATTGGAGCAAAATCTCCTTCTCTGTTGCTGGTGAGACCATGAACACAGAG GAAATGAAACAGAGAATGGCGCAGAATAGAGCATGAGAGAGATGGATTTTGCAGTGCAGTCTCATGCTCGAAACAATGTG ATCATCACCCCTCAGACATCATAGTTCTCGGAACCAAATTGGTTCCTCAGCCACCATGTTTGAGGTTATGTGAAATGTCG GTGCTATGAGAAACAAAAAGTCACGACCTTGACCAAGTGTGAGCATTCCCATTAATTGACTGAAATTGAACCAGAGAGAA AGAGACAAAAAAATAAGACTTTTTGTGCAAAGTGAAGTTCTTTAATCTAAACAAGAGTGCCCATCTTCTCCTTCTGGGTT TTACATTAACAAAGATGATATGGGTATAGTGGTGTTCAAATGGGGGGCATGAAAATTTGAGCTTGAAGAGAGAGAAGGAA TGGGAGGAGTAAATGAATTGAATTGAATGGAAGATGGTGGTGGAAATGGTGGCTGTAGCTTTGCTGGAAAGGAAGCAGGT GAGACAGTGAGAGGGAATTAAATAAGCATTGCTTTAACAGGTTGGGGTATATAAATTCAGAGATTGCCACCAAGTGAAGC TTCAACCACGTGCAGAGTGACATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGTGACTTTGAGGAGGGCAATG ATACCTTTAACAATGTTTGTGTGTGTGAGAGCTTCAGTTACCTGTTCTTTCTCTCTCTCAGCACTTTCATGTCCTGTCTG TCCTTATTGCCCGGTATTTATTCTTCACCACCAACCATGTTTCCACCACCACCACCATCACCGTAGTCACTGTCATCAAC CCCATCTTAATGAGCACCAAATAAATAGAGGATATGATATGAGGTAGGAACATTGGGGGAAGGAAATAAAATAAAACAAA GAAGATGAGATGAGTGGAAAGGAAAGAGAGTCAAGGTGGGTGTTTGTTTCTACTTGTACCGTTTTCTGGCGAAGGGTTTG GTTTGCTGTATTCAATTCAGAATTAGAAATGTTATTAAGATTCACTGTAAGG
CDS sequence (LotjaGi2g1v0429000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTTACTAAGTTCTCTAATACTGCAGGCTGTGGCTGAATTCATGTCTCAAGTTTTGGAAAAGCCAATTTTCTTCAA CCCCTCACAAATGGTACTAACTGCAGGTGCCGCCCCTGCTATCGAGATTCTAAGCTTCTGCTTAGCAGATAATGGAAATG CATTCCTTGTTCCCACGCCTCATAGTCCTGGCTTTGACGGGGATGTAAAATGGAGAACTGGTGCGGTTATAGTACCTGTT CCCTGCCGCAGCACTGATAACTTCAATCTAAGCATAGCTGCACTTGACCAAGCCTTCAACCAAGCAAAGAAACGTGGTCA CAAAGTTCGCGGAATTATAATAACTAACCCCTCAAATCCAGCTGGAAAATTGTTGAATCGGGAAACACTACTTGATCTTC TGGACTTTGCAAGAGAGAAGAACATTCACATAATCTCTAATGAAACGTTTGCAGGCTCTGTTCATGGAAATGAAGAGTTT GTGAGCATGACCGAAATCGTGGAAGCAGAAGTTCATGATCGGGACAGAGTTCACATAGTGTTCGATCTATCAAATGAGCT CTCTGTTCCAGGTTTCCAGGTGGGTGTTATCTACTCCTATAATGAGAATGTCTTGGCTGCTTCCAACAAATTAGCAAGGT TCTCAGCTGTTTCTGCTCCAGCCCAGCGATTGCTTATCTCCATGCTTTCAGATACAAGATTTATACAAACATTCATTGAG ACTAAGAAACTGAGGCTGAGGAAAATGTATAATGCATTTGTGGCAGGATTGAAGCAGTTAGAGATTGAGTGCACTAGGAG CAGTGGTGGTTTTTGCTGCTGGGCTGACATGAGCAGGTTAATCCGCTCCTACAGTGAAAAGGGGGAGCTCGAGCTCTGGG ATAGATTGCTGAATGTAGCTAAGATCAATGTTACCCCTGGATCCTCTTGTCATTGTATTGAACCCGGATGGTTCAGTTTT TGTTTTACTACATTGACTGAAAAGGATATTCCAGCAGTAATGGAACGGATTCGGATGATTTCTGAGATCACAAAATCACA TAGTTGA
Protein sequence (LotjaGi2g1v0429000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFLLSSLILQAVAEFMSQVLEKPIFFNPSQMVLTAGAAPAIEILSFCLADNGNAFLVPTPHSPGFDGDVKWRTGAVIVPV PCRSTDNFNLSIAALDQAFNQAKKRGHKVRGIIITNPSNPAGKLLNRETLLDLLDFAREKNIHIISNETFAGSVHGNEEF VSMTEIVEAEVHDRDRVHIVFDLSNELSVPGFQVGVIYSYNENVLAASNKLARFSAVSAPAQRLLISMLSDTRFIQTFIE TKKLRLRKMYNAFVAGLKQLEIECTRSSGGFCCWADMSRLIRSYSEKGELELWDRLLNVAKINVTPGSSCHCIEPGWFSF CFTTLTEKDIPAVMERIRMISEITKSHS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 13 | 13 | - | – | |
| SignalP_EUK | 1 | 13 | 13 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 9 | 8 | - | – | |
| SUPERFAMILY | 9 | 338 | 330 | 3.93E-74 | ||
| Gene3D | 9 | 231 | 223 | 3.6E-106 | ||
| Pfam | 10 | 337 | 328 | 4.8E-64 | ||
| Phobius | 10 | 13 | 4 | - | – | |
| PANTHER | 10 | 348 | 339 | 2.4E-205 | – | |
| PANTHER | 10 | 348 | 339 | 2.4E-205 | – | |
| CDD | 10 | 338 | 329 | 1.97219E-52 | – | |
| Phobius | 14 | 348 | 335 | - | – | |
| PRINTS | 30 | 50 | 21 | 5.5E-55 | – | |
| PRINTS | 52 | 73 | 22 | 5.5E-55 | – | |
| PRINTS | 106 | 130 | 25 | 5.5E-55 | – | |
| PRINTS | 142 | 165 | 24 | 5.5E-55 | – | |
| PRINTS | 176 | 200 | 25 | 5.5E-55 | – | |
| PRINTS | 208 | 231 | 24 | 5.5E-55 | – | |
| Gene3D | 232 | 336 | 105 | 3.6E-106 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Pyridoxal phosphate binding | Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
Expression pattern of LotjaGi2g1v0429000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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