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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0431700 |
| Transcript ID | LotjaGi2g1v0431700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | FAS-associated factor 2-B; TAIR: AT4G11740.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|F4JPR7|PUX8_ARATH Plant UBX domain-containing protein 8; TrEMBL-Plants: tr|I1K0C8|I1K0C8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0431700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92868553..92874093) extracted from Lotus japonicus Gifu genome v1.2.
CTTGTTGGGAGTGTCCAAGTATAGAATATTTGGAAGTCCAGTAGAAGTAGGGCTTTACTTGTTGGAAGAGTCCAGTTTCA GTTTCTGTTCAATCCAACCCAACCAACCAACCAACCAACCGTCCTTCGTTCGTGTATTCTTTTTCTCTACGCAAACCCAG AAAACAAACAAAGCTAAATATCTCTTTCTCTCTTCAACCCCAAAACAAAACTACACATCCCTTGTTGTTCTTCTCCCTGA AAATATCTCTGAATTGATTTTGTATTCGATACAACACAATTCAATTGAATTCCGATGTCAATGGCGATGCCTAATCAGGA AGCAATTGACACCTTCATCAACATCACCGGCTTATCTCAACCAATCGCACTCCAGAAGCTCCAGGTTCTCTTTTCTCGAT CAATTCATCTCTTTACTATTTCAATTGCAAGCGATAGATGTATGGATGATTATTCAACTGATTAATACCTAATACCCTAG GTTTTTCTTTCCTTAATTGCTTAGTTACTCCACTTCACCCACGCATTTATCTTGCTTATCGCTTCTTCATTGTCTTCTAA TTTCATGCTTCTCTTTCCCAACCCTAATCAACGGGTTCGATTATAATATAAATCTTGTCTTTGCTTATATAGGATGTACT CCTATTTTTTAGGAAAAAAGTATCTAAGGGTTAGATTGTATTATGACCTTAGATTAGATGATGTACCTACTACCATTGAC CTCATATTGTTACACATGAGGTTGCTTAGAATTTTAGACATGTGAGATCCCCTCATATTTTCAATGCTGCGTGCGATTTT AACATCGAAATTGTCTGCACATTATTACTATCTCATAAAAGTTGTATATGGTGTCTGGTGGTTGATTTAATGTTGTTTCT TGTCAGGAGCATGGGGGTAATCTTAATGAAGCTGTCAATGCGCATTTTAGTGAAGGAGACAGAGGTTTATCTACCAGGTA TACTAGATCAGTGAGCTTGTGAAATCTAATTAGGTTGTTAGTTTGTGATTGTGTGATCTTGATATCTTGATTCGTTCGTT CGTGTCCAGTGTGCATAATACCTCTGCTGTTGCTGCTGCTCTGCAAGATGATTTCATGGATATAGATGATGAGCTTCATG CTGATGAACTTCGCGGACCTCTGCCTCTTTTATCTTCTGCTAGAACTAATCCCTTTTCTCTTCTCGATCCAACACTTGGG AGAAGTATATTTGATTCTCATCTTGATCCAACAACCCAAGCACCGTTTGTTACCCTTCCGAGAGAGGTGAGAGAGATTCC TATAGAGGTTAAGGATGGCAGTCAATCTGCACCTCAAGGTAGCCATGATCCGAGTCCAACTATCGAAGATGTCACTGGAA GTGTTCAAGCAAATGGTCCCGATATTCAGGGGATTATCAGACTTGATGATGAAGATGATGACGACACACTAACTACCCGG ACTGCACATCAGGATGAGCAACACAATATCTTGGGTGATACTTCACGTGACCAAAGTGCTATGCCCAGTGCTCCTAGGTT TGAGAATTTGCCAGATTATAGCAATGACATAGAAGAAGAAATGATCCGCGCAGCAATTGAGGCTTCTAGACGGGAAGCTT CTAGCCTTGGCAGACAAACTGTATGTTTATTTTTTTATGGATTCTCATGCTCTGGTATTCTGAATGATGGTCTTGCCTTA GTATTTATATCTCACCTGGTGTAGGATTTAAGTGAAGCGGGGCCTCAGTCAATGCAATCAGATTTGGAAGATCCTGAGCT TGCCCATGCAGTTTCACTGTCTCTGAAGGCACGTTAATATTTATTTAGTTATTCATTTTTCTTATTCCTTTATGTTACTG TGCCTTGAACCTGTCGTTTTAAATGCATTCTCACCAGGACAGATGGTGCTTCCACTTTGTTTTTCACTAATAATGGAAAT TTTGAACCTTAACCCCTTTTAACATTAAATGAATCCAGACAGCTGAGCAAGAGAAAGCATTGCGCAAGCAAGGAGGGGAG GATGGGGATGTTGGAGCATCAACAGGGCCATCTAAGTCATCTGAAGTTGAACTACAGGAAATGACATCAAATGAAAGGTA TATTCTCTTTAAGCTTGTTTTTGTTCTTGCGCTCTACTACATGGTCTGTATAGGATACTGCATTTTTCCCTTTTGGTGGT TGAATCTGAAAGGGACAATATGGTTATTCTAGACTGCAGACAGGAAGCTCATCCTTCCAAGATGAAGGTGAAGACTTAGA AGAGCAACCTCTGGTTAGGAACAGGTCTAGGCGAACAACTTTGGGCTCGTCAAGGTCAGCCAATAATGATGAAGTCATTG AGGCCAGTACACCACCAGCAGCTGTTCAGCAGGATGACAGCAATCTTCCTCAGCAAAATGACGATTCCTTCCCCACTGAT GAGGTGATTAGTCCTTCAGTTAATCAGTTTTCATAAAGAAATTATGTTTCTGGTTTGCCACTGCATCTCAGTGTTCATTC CTCCTATTTCCATGTCGTACTTAAATGAAATTGCAGTGGGGTGGCATTTCTTCTGAGGAGCATGATGAAGCAGTTATGCT TGAGGCAGCAATGTTTGGTGGAATCCCCGAAGGGCGTCAGTATCCCTATGCTTTTGCACCACATGAGTTCATGCAGAACA GGGGTATTTATCCTCGGCCAATGCCTCGTCCACCTTCGCCATCATTGACAGCTCAGCGTTTAATAAGGGAACAACAGGTA TGGTCGGAAATGTGGATTGTAGGTTGTAGGAGATGGCCTTACCTAACAGCTGCTATTGTTTCTTATATTTATTTAATGCA GGATGATGAATATCTTGCATCACTACAAGCAGATAGAGAAAAAGAATTGAAAGCCATCGAAGAAGCCGAGGCTGCTCGTG AAGAAGAAAAGCGGAGAGAGGAAGAAGCTCGCAGGAAATTACAGGAAGAGCAGGTAATGCATTTGTAACTAATTGCATTG TTTTCAAATTTTACTTGCTTTGAGCTGACAGTGCCTTTTTTATCCAATTTTATTTATATAAGTAGAGACGATACGGTAAC GACAGACAGTTGCCATACATTTCAATTTTATTTTATATTCCATTCTCATGCATTTCTTGGAGGGTAGGAGAGCAGCTATT ACTAAGTAAACAGTTGTTACAGGTTTCCGGGGATGGGTTCCACTAACACACACCCCCGGATATTTTTTCATGCTTCCAAT GTCTTGCTTTTTTTCTTGATTTGTATCCTTATTATGTACGTATGTACTTCCTTTTGCAGAACCTAACTGAATCTTTGCTT TCCTCAAAAGAGAACTATTAGCATGTTTGGTCGTTCTTCTAATTCTCTCATAAAGTCATAATCATTTCTCTCATCACAAA AGCTACTTATAGTAGCTTCTCCCTATGTGGAAGCCTACTCAGTTTTCAAATACACACTATGTCCAAGTACATTGTAATCT TACATTTTGTGTAATAATTCTGTGTCAGGAATTGGAAACACAGTTGGCAGCAAAAGAAGCTTCCCTACCATCCGAACCAT CCTCTACTGATGAGAATGCTGTTACCTTGCTAGTAAGAATGCCAGATGGTAGCCGCCGCGGACGCCGATTCCTTAGATCT GATAAGCTACAGGTAGAGAAGGACCTGATAGAAATTGTGTTTACCTCTTGTTTCGTGAATATTTCTGCTAAACTTGACTC TGGGATTTTTCAGTCTCTTTTCGACTTCATAGATATTGCTAGGGTGGTGAAACCTGGAAGTTACAGACTGGTGAGTAGAC CTCGTTGGATTTCAGTTTTTCTAATAATTCCTACCCTTGGCATATATTCTCATTGACATTGCGATCACTCGTTTGTTATT GGGACAGGTGAGACCTTATCCTAGGCGTGCTTTTGGTAATGAAGAAAGTGCATCGATACTGGAAGAGCTTGGCCTAACCA ACAAGCAAGAAGCCTTGTTTTTGGAGTTAGTCTAATGCCCTGAAGCATATTTCTGGAAAACCATTAATTGAAGCTTTTAG TTATTAAATTATGGATCCTTACACATGATGATATGGAATTTCCACCTGGTTTGTGTTGTTTGGGTAAAGATATTTATAAG GGTTAAAAACTATAATCGTCCCTGAACTTTGAGCGAGTTTTGAAAACCGTCCCTCGCCGGAAAATTATCTGAGAACCATC CTCAGACTTTCAAAAACAAATTTGACCCGTCCCTCCTGCAGTCTTAGGTCCGGCAACCGCTTACGTGTCTGTCCACATCA GTTAATGAGGGTCCTACGTGTATTTTTTTTAAATAATAAATATTTCTTAAAAAAAACATCATCATTTATTTCAAAATAAT CTCTTCATCGTGAATATAGCAGTGGTACAGAAATCATTATCTTCTTCATTATTATGTGAAATTTTTATGTTTGCCACTGA TCTGTGAAATTTTTTTATAGGTTTCATGAATTACCGGAACAAGGATTTATTTTTTCTTTCAGAATTCTATTAATTTTCAA TTTTTTTCCACGCAATTTCAATGGTGTTCTTTTTCACCAACCTGAACGATTTATTCTGGGTGTTATTGGATGAAAGAGCA TGTTTTGTTTCATGGGTTTTGTTGATTTGAATCATCATCACAATCATCATTTGTCACCACCTGCACATGCGTCTAGCTAG CTTGCCATGTTTTGATGGAGAATCTGCGTGTGTGAATGAAGATGGAGAAGTACCCGAGAGATCTGCTTCACAAATTCCCG GTGTCAAGTGGTGGCAGTGAGAAAATTGATAACAGAACGCAGACACAGATACAGATTCAACAACCCCAAAACCTCAACCG TTGCATAACCATAGAGAGCCACCATCCCAAACCTCCTCAGATCAGACAAGCAAAAAACTCAACTCTAGAAGAAGAAGAAG AAGAAGGTAGTTCAGATCTGAAACCAAACTCGGTTGCTCCTCCACCGTTGTTCACATCTGAAGTCAAATCTCCCTCTTTT TCTTCAAACCCAGCCAAATCCCCCTCTTTCTCTTCAAACCCAGCCAAACCCCCTAACCCCCTTCTTTCTAGGTCGGCGTT TTGAGGTTTGTTGGTGGTGGAGGCGCGGTATGGGCTAGGGTTGGGGGTGGCGGCGCGGTGTGGTTGCGGCGGCGGTGCGA TGTGGTTAGGGTTGGGGGTGGTGGCGTGTTTGGGGGATGTTGGAGGAAATGAAGACATGATGAAGAAGAAGAAGAAGATG ATGGGGACTCAGGGATAATTTGGAGATTTAGGTTTATATTAGGGTTAAATGATTAATTAGTAATAATAATTAGGAAATAT AAATTATTCAAAAATAAAATAAAATCCACGTCAGATCTCATTAATTGACGTGGAAGGACAAGTCAGCGTTGGCCGGAGAC AAGGCTGCCGGAGGGACGGGTCAAATTTGTTTTTGAAAGTTTGAGGATGGTTCTCAGATAATTTTCCGGCGAGGGACGGT TTTCAAAACTCGCTCAAAGTTCAGGGACAGTTATAGTTTTTAACCCTATTTATAATGCACCCGCCAGTCTAGGATTACAA CAAAATGATTTTAAGGTTCGT
CDS sequence (LotjaGi2g1v0431700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAATGGCGATGCCTAATCAGGAAGCAATTGACACCTTCATCAACATCACCGGCTTATCTCAACCAATCGCACTCCA GAAGCTCCAGGAGCATGGGGGTAATCTTAATGAAGCTGTCAATGCGCATTTTAGTGAAGGAGACAGAGGTTTATCTACCA GTGTGCATAATACCTCTGCTGTTGCTGCTGCTCTGCAAGATGATTTCATGGATATAGATGATGAGCTTCATGCTGATGAA CTTCGCGGACCTCTGCCTCTTTTATCTTCTGCTAGAACTAATCCCTTTTCTCTTCTCGATCCAACACTTGGGAGAAGTAT ATTTGATTCTCATCTTGATCCAACAACCCAAGCACCGTTTGTTACCCTTCCGAGAGAGGTGAGAGAGATTCCTATAGAGG TTAAGGATGGCAGTCAATCTGCACCTCAAGGTAGCCATGATCCGAGTCCAACTATCGAAGATGTCACTGGAAGTGTTCAA GCAAATGGTCCCGATATTCAGGGGATTATCAGACTTGATGATGAAGATGATGACGACACACTAACTACCCGGACTGCACA TCAGGATGAGCAACACAATATCTTGGGTGATACTTCACGTGACCAAAGTGCTATGCCCAGTGCTCCTAGGTTTGAGAATT TGCCAGATTATAGCAATGACATAGAAGAAGAAATGATCCGCGCAGCAATTGAGGCTTCTAGACGGGAAGCTTCTAGCCTT GGCAGACAAACTGATTTAAGTGAAGCGGGGCCTCAGTCAATGCAATCAGATTTGGAAGATCCTGAGCTTGCCCATGCAGT TTCACTGTCTCTGAAGGCACCTGAGCAAGAGAAAGCATTGCGCAAGCAAGGAGGGGAGGATGGGGATGTTGGAGCATCAA CAGGGCCATCTAAGTCATCTGAAGTTGAACTACAGGAAATGACATCAAATGAAAGACTGCAGACAGGAAGCTCATCCTTC CAAGATGAAGGTGAAGACTTAGAAGAGCAACCTCTGGTTAGGAACAGGTCTAGGCGAACAACTTTGGGCTCGTCAAGGTC AGCCAATAATGATGAAGTCATTGAGGCCAGTACACCACCAGCAGCTGTTCAGCAGGATGACAGCAATCTTCCTCAGCAAA ATGACGATTCCTTCCCCACTGATGAGTGGGGTGGCATTTCTTCTGAGGAGCATGATGAAGCAGTTATGCTTGAGGCAGCA ATGTTTGGTGGAATCCCCGAAGGGCGTCAGTATCCCTATGCTTTTGCACCACATGAGTTCATGCAGAACAGGGGTATTTA TCCTCGGCCAATGCCTCGTCCACCTTCGCCATCATTGACAGCTCAGCGTTTAATAAGGGAACAACAGGATGATGAATATC TTGCATCACTACAAGCAGATAGAGAAAAAGAATTGAAAGCCATCGAAGAAGCCGAGGCTGCTCGTGAAGAAGAAAAGCGG AGAGAGGAAGAAGCTCGCAGGAAATTACAGGAAGAGCAGGAATTGGAAACACAGTTGGCAGCAAAAGAAGCTTCCCTACC ATCCGAACCATCCTCTACTGATGAGAATGCTGTTACCTTGCTAGTAAGAATGCCAGATGGTAGCCGCCGCGGACGCCGAT TCCTTAGATCTGATAAGCTACAGTCTCTTTTCGACTTCATAGATATTGCTAGGGTGGTGAAACCTGGAAGTTACAGACTG GTGAGACCTTATCCTAGGCGTGCTTTTGGTAATGAAGAAAGTGCATCGATACTGGAAGAGCTTGGCCTAACCAACAAGCA AGAAGCCTTGTTTTTGGAGTTAGTCTAA
Protein sequence (LotjaGi2g1v0431700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSMAMPNQEAIDTFINITGLSQPIALQKLQEHGGNLNEAVNAHFSEGDRGLSTSVHNTSAVAAALQDDFMDIDDELHADE LRGPLPLLSSARTNPFSLLDPTLGRSIFDSHLDPTTQAPFVTLPREVREIPIEVKDGSQSAPQGSHDPSPTIEDVTGSVQ ANGPDIQGIIRLDDEDDDDTLTTRTAHQDEQHNILGDTSRDQSAMPSAPRFENLPDYSNDIEEEMIRAAIEASRREASSL GRQTDLSEAGPQSMQSDLEDPELAHAVSLSLKAPEQEKALRKQGGEDGDVGASTGPSKSSEVELQEMTSNERLQTGSSSF QDEGEDLEEQPLVRNRSRRTTLGSSRSANNDEVIEASTPPAAVQQDDSNLPQQNDDSFPTDEWGGISSEEHDEAVMLEAA MFGGIPEGRQYPYAFAPHEFMQNRGIYPRPMPRPPSPSLTAQRLIREQQDDEYLASLQADREKELKAIEEAEAAREEEKR REEEARRKLQEEQELETQLAAKEASLPSEPSSTDENAVTLLVRMPDGSRRGRRFLRSDKLQSLFDFIDIARVVKPGSYRL VRPYPRRAFGNEESASILEELGLTNKQEALFLELV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 3 | 47 | 45 | 8.3E-6 | – | |
| PANTHER | 3 | 595 | 593 | 1.6E-234 | – | |
| PANTHER | 3 | 595 | 593 | 1.6E-234 | – | |
| SUPERFAMILY | 6 | 46 | 41 | 1.43E-5 | ||
| Pfam | 8 | 48 | 41 | 1.4E-10 | – | |
| CDD | 8 | 44 | 37 | 8.10917E-13 | – | |
| MobiDBLite | 134 | 163 | 30 | - | – | |
| MobiDBLite | 138 | 163 | 26 | - | – | |
| MobiDBLite | 179 | 215 | 37 | - | – | |
| MobiDBLite | 179 | 196 | 18 | - | – | |
| MobiDBLite | 234 | 386 | 153 | - | – | |
| MobiDBLite | 237 | 254 | 18 | - | – | |
| MobiDBLite | 293 | 321 | 29 | - | – | |
| MobiDBLite | 336 | 354 | 19 | - | – | |
| MobiDBLite | 361 | 381 | 21 | - | – | |
| Coils | 454 | 505 | 52 | - | – | |
| MobiDBLite | 472 | 514 | 43 | - | – | |
| MobiDBLite | 472 | 498 | 27 | - | – | |
| SUPERFAMILY | 476 | 591 | 116 | 9.3E-23 | ||
| SMART | 510 | 594 | 85 | 5.4E-8 | ||
| ProSiteProfiles | 513 | 591 | 79 | 18.455 | ||
| Pfam | 513 | 593 | 81 | 3.7E-18 | ||
| Gene3D | 514 | 594 | 81 | 9.1E-22 | – | |
| CDD | 519 | 593 | 75 | 6.94623E-21 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0431700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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