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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0434200 |
| Transcript ID | LotjaGi2g1v0434200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Haloacid dehalogenase-like hydrolase superfamily protein; TAIR: AT4G11570.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|P44004|Y488_HAEIN Uncharacterized protein HI_0488; TrEMBL-Plants: tr|A0A1J7GVC4|A0A1J7GVC4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0434200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93076024..93078403) extracted from Lotus japonicus Gifu genome v1.2.
ATTAATTTCGGAATCTAAGATTCCGAAATAATTCGGAATTTGAAAATCCAAAAATTAGGGGTGTGAAATCTAATGGTTGG GGTGGCAAATCTAGCTCTCACCCACCCACCACAAACACTCAAACCAAGCAACGAATAGCACCTTGTCTTTCTCTATCCAA TCTTCCCCAGAACACACACAATTGAACATTAGAAAAATCTTCTATTCTTCTCCAGGTTTTTTTCTTTATCCATTCTTTCT ATTTTTCTATGCATGCCAATTTCTGTATATTTTATTTTTTCTTTGTTTATACTTATTTATTTATGCATTAGTTTTGATCC TAGATGTAACCGCTTGTGTCTCCAATCTGTTGTATTTTTTTACTTTGTTTTCACTCCTTAATTTTTGTCTTCCAGTTCAC GTAGTGATTTCCTTGCTAATTTTGCTATTTGAGTAATTGAGTTACCTTATGATTGGTGTTTGGTGAAGAAATTTGAATGG TGGTTCTTGATTACAAATTAGGGATTTGAGTTTCTCATTGTTCTTTCAGCATTGATTGAATTCTAATTCTTAATCAGGTT GGTTTGATTGGGTTTGGCTAGGATCAAAATGGTTGAATCTGTTGCTGCAGCTTCCATTCTCAGTCACCGTCCTGTCTGTG AAGGATATTTGATGAGGGGTTTATCAATTAAAAGCAAATCTTCGACTAAAATTCGGTTCCCGGCGATAGAGTTTCTAGGT GGAAGAAGGATCAGCGTTTTTTCTCTACCTTGCAAAAAACCCAAAGCTCATAATAGCTTCTTGTTGCTCTCATCAATTAA GGCCTCAGCAGTGGAACTCACAAGAGAGGTGTATTCATACAGGGAAGATAAATTGCATAAAAAGAAGGATAACAATAATA ATAGCAATATTGATAAAGGAGATGCACATGAGGTGTTTGATCCTAGGCCTTGGTTGTGGCCTCCAGTAAATAAAGCAGAT AACCCATCACTTCATAACCCTTTGCTTAGACAACAAAGGATGGGATGTGGCTCGTTGGCTGCTATATTTGAACTTGAAGG GGTTCTCATTGAAGATAACCTTGATCTTGAGAACCAAGCTTGGCTGGTTCTATCTCAACAGGAAGGAAAATCCCCGCCCC CTGCTTTCATTCTTAAGAGAATCGAGGGCATGAAGAGCGAGCACGCTGTTTCCGAGGTGTTGTGCTGGTCCAGGGACCCT GCACAGGTAAGAAGATTGGCTTACAGAAAGGAACAAATCCACCAAGCTTTGCAGGGTGGGATGTATAGGCTTAGGCCTGG CTCCGAAGAGTTTACTAGTGTTTTGATGCACTATGGGATACCCATGGCATTGGTTTCCTCGCGCCCGAGAAAATCTGTTG AGTATGCCATGGGGGCAGTTGGTATTGAAAACAATTTCAGTGTGATTGTAGCAGCGGAGGATGTTTACAGGGGGAAGCCT GATCCAGAAATGTTCATGTACGCGGCCCAGCTTCTGAACTATATTCCTGAGAGGTGCATTGTGTTTGGAAACTCGAATCT AACCGTGGAGGCTGCACATGATGCGCGGATGAAGTGTGTGGCTGTTGCTAGCAAGCATCTTGTTTATGAGCTGGGGGCTG CAGACTTGGTTGTAAGGCGCCTGGATGAGCTTTCAGTGGTTGATTTGAAGAATCTAGCAGACATTGAATCAGCTGAATTT GGGGAGCATGAGGTGGAGATGGAGAAGGAAGAATTCTCTTAACACTTCATGTGTGGAGGATAGTTTCTGATAAAACCTAT AAATGTACAGTTCCACTTGATCTCATTCTTGTCAATAATAGTTATATATCATCATCAGTCACTCGTGTGAATGAAATACA AAATTAATGGGCAAAAAAAGAAGATAGGGGTCTGCATTTAACACTTTCAACGTATTATGTACATCATGCATCACAGAATT TTCAAATTTGATTAGTTTATGCTTTCATCCATAGTTAATTATAGATTTTATTGTGACAGGAGTCCTTCCAGAACCAGCAA ACAAAGGAGAGAGTTGTTACTGCGAGGAAGTAATAATCCGGGATGATCATATATGATACACGAAACTAGCAACAAATATT GTTTAAAAAAATGGAATAGCGTGTTTCCTCCTTTAGCCCTCTTCTCTTTTTGATGGAATTCCCTGTGTCATTCAAGAATT TTGTCAATGACAAATTTAACAATATAAAATTAATTTAAAAAATAAAGTAACATTCAATTCGCCTTCAATTTTAAAAATTA ATTTTCTCAATTCGCCTAATAATGTCACAAGATTCAAGTTAGGAATATTCAAAAATTAAGACTTATAGGTTCTTTATAGG TTCTAAATATGATCTTTTTTGTACCGTGAACCAAAATGATATCATCTGAATAAAGATGAA
CDS sequence (LotjaGi2g1v0434200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGAATCTGTTGCTGCAGCTTCCATTCTCAGTCACCGTCCTGTCTGTGAAGGATATTTGATGAGGGGTTTATCAAT TAAAAGCAAATCTTCGACTAAAATTCGGTTCCCGGCGATAGAGTTTCTAGGTGGAAGAAGGATCAGCGTTTTTTCTCTAC CTTGCAAAAAACCCAAAGCTCATAATAGCTTCTTGTTGCTCTCATCAATTAAGGCCTCAGCAGTGGAACTCACAAGAGAG GTGTATTCATACAGGGAAGATAAATTGCATAAAAAGAAGGATAACAATAATAATAGCAATATTGATAAAGGAGATGCACA TGAGGTGTTTGATCCTAGGCCTTGGTTGTGGCCTCCAGTAAATAAAGCAGATAACCCATCACTTCATAACCCTTTGCTTA GACAACAAAGGATGGGATGTGGCTCGTTGGCTGCTATATTTGAACTTGAAGGGGTTCTCATTGAAGATAACCTTGATCTT GAGAACCAAGCTTGGCTGGTTCTATCTCAACAGGAAGGAAAATCCCCGCCCCCTGCTTTCATTCTTAAGAGAATCGAGGG CATGAAGAGCGAGCACGCTGTTTCCGAGGTGTTGTGCTGGTCCAGGGACCCTGCACAGGTAAGAAGATTGGCTTACAGAA AGGAACAAATCCACCAAGCTTTGCAGGGTGGGATGTATAGGCTTAGGCCTGGCTCCGAAGAGTTTACTAGTGTTTTGATG CACTATGGGATACCCATGGCATTGGTTTCCTCGCGCCCGAGAAAATCTGTTGAGTATGCCATGGGGGCAGTTGGTATTGA AAACAATTTCAGTGTGATTGTAGCAGCGGAGGATGTTTACAGGGGGAAGCCTGATCCAGAAATGTTCATGTACGCGGCCC AGCTTCTGAACTATATTCCTGAGAGGTGCATTGTGTTTGGAAACTCGAATCTAACCGTGGAGGCTGCACATGATGCGCGG ATGAAGTGTGTGGCTGTTGCTAGCAAGCATCTTGTTTATGAGCTGGGGGCTGCAGACTTGGTTGTAAGGCGCCTGGATGA GCTTTCAGTGGTTGATTTGAAGAATCTAGCAGACATTGAATCAGCTGAATTTGGGGAGCATGAGGTGGAGATGGAGAAGG AAGAATTCTCTTAA
Protein sequence (LotjaGi2g1v0434200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVESVAAASILSHRPVCEGYLMRGLSIKSKSSTKIRFPAIEFLGGRRISVFSLPCKKPKAHNSFLLLSSIKASAVELTRE VYSYREDKLHKKKDNNNNSNIDKGDAHEVFDPRPWLWPPVNKADNPSLHNPLLRQQRMGCGSLAAIFELEGVLIEDNLDL ENQAWLVLSQQEGKSPPPAFILKRIEGMKSEHAVSEVLCWSRDPAQVRRLAYRKEQIHQALQGGMYRLRPGSEEFTSVLM HYGIPMALVSSRPRKSVEYAMGAVGIENNFSVIVAAEDVYRGKPDPEMFMYAAQLLNYIPERCIVFGNSNLTVEAAHDAR MKCVAVASKHLVYELGAADLVVRRLDELSVVDLKNLADIESAEFGEHEVEMEKEEFS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 375 | 375 | 2.6E-169 | – | |
| PANTHER | 1 | 375 | 375 | 2.6E-169 | – | |
| Gene3D | 144 | 329 | 186 | 7.7E-37 | ||
| SUPERFAMILY | 144 | 348 | 205 | 5.86E-37 | ||
| Pfam | 146 | 326 | 181 | 5.5E-17 | ||
| Gene3D | 155 | 228 | 74 | 7.7E-37 | ||
| CDD | 205 | 328 | 124 | 6.7888E-32 | – | |
| TIGRFAM | 260 | 326 | 67 | 4.7E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi2g1v0434200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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