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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0445100 |
| Transcript ID | LotjaGi2g1v0445100.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Light-mediated development protein DET1; TAIR: AT4G10180.1 light-mediated development protein 1 / deetiolated1 (DET1); Swiss-Prot: sp|Q9ZNU6|DET1_SOLLC Light-mediated development protein DET1; TrEMBL-Plants: tr|A0A151SCZ6|A0A151SCZ6_CAJCA Light-mediated development protein DET1; Found in the gene: LotjaGi2g1v0445100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94030010..94038124) extracted from Lotus japonicus Gifu genome v1.2.
AAAGAAAGGAAAGGAAAGTTGTGGTGTTTGATTGGGGGTTGCATTTTGATTGCAATTGCAAAGGAAGAAGACGACGAAGA AGAAAAGTGAGTGTGTGAAAGGGAATTCGATGCACGACACACACGGGGTGGTGATGTGGCATCTTCGAACTCCATTACTT CATTCTCACTCACCCCAATTTCATTTAAATTTCTAGATTCCCAAAATCCCCTCACTCTCTCTCGCTCTCACGCCGCTGCT CTCTTCCCGTCAACACCGCTTCCCGCCGTGCCCTCCCTCCGGTAACCTCTCTGATTCTCTGCTTCCAAACTCGCTTTCTA TTTCTCTCTGATTTTCAATTGTATGTAACTGTGTATTGTAATCCTCATGTGTCTACTGTTCAACCTGAGTTGCGAAATTT CTAGCTCCATCGAGTAGTTATGTTGTAGATTTAGCCGAACATAGCATTGTTCATACCTTCTTCATGTTGTAGCTATACAT GCTCCGGTGTTTGATTTGAGGTTCCTCAAACTACAACATGAGTTTTTAGGGTAGTTTAGTTTAATATAAATGATCCTATA GAAAATAACTTGTCTGATATGATTTGTTTTCTTCACTTTCAGGGTAAAGTTGTCAAGTTTGTGGACAAGATTTAATGTTT TACAGAAGCAGCAATATTGTGGCTAGGATTTTCGATCGTCAACTTCGCACTCCTGCTCCTGGCACTAGTGTAATTTCTCC GTAATCATAATTATGTCTTCTGGAAATTCTTGCAAATGTGGTCATGTTTTGCCTCTTTTTAGTTTACCGACTTGTCCGAT GAATAATTTTTAAAAGCTGAGGTGTGGAATGGTTAATGAAATTCGAATTAAAAATGTTTACATGGTTTTTACTTAGCTGT ATAAGTTTGGAAGCGCTTCAGAACAGTTTATCTGACTCTGTTGAATTGAGCCGTTTCAAGTATAATGTTTTTTATGTTGA AACTTGAAATACAAAAGTGTATTTGGAGTGCCATTGTGGAAAATATGCTTTTCTGAGAAATTTGTAAAATTGGTGTCTTG TTCCTTTGTTGAAGGAACCTGAATTGAATTTAATTTTTGCAGGTGTAATTTACTTCTTGCAGGTTCATCATGCTCGCAAA TTCTATGAAAACTTAGTACCTAGTTACACAGTCTATGAGGTTGAGTGCCCGGACCATTCGTTTCGTAAATTCACAGATGA TGGTCAATACCTTATAAGTTTCAGCAGAAATCATCAAGAGTTGATTGTTTATAGGCCTAGGTGGCTTTCCTTTTCATGCA AAGATGAAGATTGTGACCAGCATGATTTGCCATCAAAAGCAAAGAGATTTGATAGTTTTTTCACTCAATTATATTGTGTG CCTCTTGCCTCTTGCAATGAACTTATATGTAAAGATTTTTTTCTTTACATGGAGAGTAATCAATTTGGACTGTTTGCTAC TTCTACTGCCCAAATACATGATGCGCCTGCTGTTGGAGGAGCTGTCCAGGGTGTTCCTTCAATTGAAAAGATAACTTTTC ACCTCTTGAGGTGCTTTTCTTTATATTCAATTTTTTCATTTTCAGATCTTCAAAATCATATCAGCAATCATATTCTGGTT ATTTTGTACTTATGTCATTTTCCCCCTGATTTCTCACCTATTATACTTAGATTGGAAGATGGATCAATCCTGGATAAGAA GGTCTTCTGTAATGACTTTGTTAATTTGACTCATAATATGGGGGTCTTCTTGTATGATGACCTACTGGCAATTGTATCAC TTCGCTATCAAACCATACACATTCTTCAAATTAGGGACTCTGGAAACCTTGTAGATGTACGTGCTATTGGGGAATTCTGC CGTGAAGATGATGAACTTTTTCTCAACTCAAATGCTCAGGTCTGCAAGCTTTTGGTTGGCTTTATTCTACAAACGTTATG TTACATGCGCCTTTAGATGAATTATTGAGGCTTTTTAACAGAAAAAACTACAATTTTTTCCGGACTTAATATGCTATGCC GTTAAAAATTAATAGGGAGGCTTAATATCACACATAATCTGATGGTTTTGTGGCATATTTAAAGCACTACACTTATCAAA GACAGTCATTTTCTGACAGTACATGGCATTGTCTGACAAAAACCAACAGCATCAGTTGCCTGGGAACCACACAGAAAATA ACATACATCAAGATCAAGGCCAGCCTAATCTGGGGAGGTCTTTTCTAAGTGGTATAAAGCAGCGATTGCTTTCATTCATA TTCCAGGGACTATGGAATGAAGAAAGAGATGATACCTTGGTTAGTATTCTAAGCAGCAATACATTTTGAATAAAATCAAT TACTATATGAGTGTGTAAGTAATTATTATTAGATAAATACTTATTATATAATGTTCACACTCACCGTCCCTTCTAATTAC TGCTTAGCAATTTTTTCCGTGTTGAATTTCTTTTTGATTTTTTGTATCTTTCAAATTCTAACTTCTTTTATTATGCATAA ATTCATTGTTTTAATTTATTCTACTTTTTAACCTGATTCACCAGAGGGTCCAAGGACTAAGGAAGAAGTTTTATTTCCAC TTTCAAGATTATGTTGATTTGATTATCTGGAAGGTGGGTTCTTTGACACATTTTATGCATTCTGAGTGCTTCTATCTCAG CTTTATCATCAGACAAAATCATTTCCCTAATGGTTTAAATCTTCTTTACATTGTAGATTTTTTCCTATGCATATATTAAG GAATGTAACAAGTTGCATCTATTCAACTCCTGGGCAGGTGCAATTCATGGACAGACATCACTTGCTAATCAAGTTTGGTA GTGTAGATGGAGGGGTGAGTTCTCTTTGTATGTCTTTTTTTTATTTGTTATGAGAATTCCTTTTACAGTCTCTAAGAACA GATGAAAATTACTTTCAAGCAACCTGAGCGTGGCTCAAAGCCTAAACACTTCCTTGTAGTAGAGCTCTAGCTTCCCTGTG GGAGGTTCCTTACTATATAAGGAGAGCCCTGATCGAAAAAAATTTAATTAGAAAGGTTATAATTGAACTGGTACAAAAAA AAGAAGTGATTTTATTTAAGAGACCCAAATTTTCCAATCTGCTCCAATGTGGACAGATTTTAAACAGGGCAGAGAAACGA ATACAACTGCTGAGTGTTTTGACTTTTGAGAGCCTCAGCTTCTCTCCTAATCTCCAATTTTACAGTCCAATACCCTAGCA ACATTTCTTACTTCCTTTTATTTTTACTAACAATCTACCCCTTTTTCCTGTAACCACTAACTAACAGTCACACTCATTTA ATTAGCTTTACAAAAACAACTCAGTTAAGGGTCGCAAATCCCCTATAACTCTCCTACGCCTTCTCTGATAGACTTTTCTA ATTGGAGATCTATTACTAATACATTAATTCTTCTCAAATCTTAAGCTGGTAGCTGAAATGGTAATTATCTTTTGACAAGC CCCCTCAAAACATAGTTTGGCTAAACTGTTGCTGAAATTTAATATAATTTATCAGGGCAACAAGGATTGAACTCTGATCA CTAGGTCTTAGATATTTCATACCAATACCATGTTAGGGACAAACTCTTAAAGGCTTACAGTTGTTAAGTAGAGGCCCAAG AATGATTTTATCAATGACAATTTGATCAGCCGGTAAAAATGGGGAAGAGCTCATGTTTAGGTATTCATCTGGTTAAACAT CCCTGAAAAGTTCAACCTGGAGACTCCAATTGAGTTATTAGTTCATATTGGTAATATTATATTATGATGTTTTGATCTTT CACATTTGAAGCCTCAGGTGTCGCGAAATGCTGATCACCACCCAGCTTTTGTTGCTGTGTATAACATGGATACAACTGAA ATTGTATCTTTTTATCAGGTAAATTTTGTTTGTCCTGTGTTTTATTTTCTCAGGCTTTCTCTGTGCTAGAGTCTTGGATT TTTTTTTCTAATTCTTCTTTACATCCTATCAGAATTCAGCAGATGAGCTATACACGTTGTTTGAGCAGTTCTGTGACCAC TTCCATGCAACGTCAAGGAATTCAATGTATATGAATTTCATATCATCTCATTCAAATAATATTCATGCACTGGAGCAGCT AAGAAGCATAAAAGATAAGGCAAGCAACTCTTCACAGGTAAAGTGTTGGTTGGTTATAACCTTGTGGTTGCCTGCTCCGT CCCTCCCTCCCCAGAAAAGAAGAAAAATAAAAAAATATAGTCTACATGGTCTGCTAATATGTTGTATGTATAAATTTTGT GTTTTGCAGTTTGTGAAGAAGATGCTTGCCTCTTTGCCTTTCAGTTGTCAGTCACAGAGTCCTTCTCCTTACTTTGACCA ATCTCTTTTCCGGTTTGATGATAAGGTTTACTTTTAGTTGTTTTTTTTTCCCTACTTTGCATGCACCAGCCATAATTTCT TCTTTTTTCCAAAAGAAAATTAAATATTTAGGAAAATGTTAGGTATATGCTGGTTCAAGTGCAGTTTCAGCTGTTAGATT AGTGCTAGTAATACTAAATAGTAAGCTAGTGTTCACGGGGAAACCAATCTTACCTTTTTTGGTGAGAGGCCATAACACCA GTTGCGCTTGTATCATGTCTATCTGAACGCCCGTTTCTTCCAAATTTTGAATTTTAGATTTTAGATATATGGAAAGAAAT TTGAAGCTGAGTTCTTTTGGTGGAGGTGGTGGCAACATTTGCTGCATGATATAGTGATATTGAAAAATGGTATATTGAAA GGATATGGTAACAGTGGCGAGGATTCTATAGGTTGGTTGATTACTGGTAGAGATTCCAATTTTATTGAAAAAGAAGGATG ACTGTAGTTGTGGTTGTCTACTTTGAATTACAGTTGGAAGTATATTTTCTCTGGTTTCCTTACACTTGTTCTTGTACTGA AAACGATAGGTTTTATTTTCATCAACCAATTTCATAGAACACTTGATGCACAATTTTCACCAATCAACTAGATTTTTCCC TTAATATGGATTATATTTTTAATTATTCCCAATATTGCAGCTGATTTCTGCAACAGATCGGCATAGGCAATCAACTGACC ATCCAATCAAGTTCATTTTAAGGAAACCTCCGTATTCTCTCAAATTTAAGATTAAGCCAGGTACGTTTTTTTCCCCTTGT TCAATCTTATTGGCTTCTAAAAGATGAATGGCGGGATCATGCTTTTCTAATGTGAGGATGCAAAAGAGAGTGAAATGCAA GTGGCAAAAATCATAGTATCAAACAATGTTTTTTGTAGAATACAAATTGGATAACCAACTATAGATTTGGGAGAGCCTAT AATCACTAATCACTATAGGCTCTCACAAATCTTTTTTGTAGTGATTAGTGATTCCTCCCAACTTTTTTTTTCTTTTTTTC TTTTTAAATATATCTATTATCTATTACTTTCTTTGATGCGGAGTAATGTTCTATTTGATATGCTGCTATGATAGTTTTCT TGCATTAGTTATCTGATCAGTAATCCACGCAAGATGCAACTTTGATCTGTTTTTTGAACATGAATTTAGCAGACTTTATT TCGTGCTTTAAATTTATTTTTTGTTATTTAGGTCCTGAAGCTGGTAGTATGGATGGTCGTGCAAAAAAGATCTCTTCGTT TCTTTTTCATCCAATTTTGCCCCTTGCTCTATCTGTTCAACAGACTCTGTTCTTGCAGCCTTCAGTTGTAAATATTCACT TTCGAAGATGAGCGTAGATTTGTTCGTCTTCCTATGTAAACTGTTTCCAATGGGATCAAGAGAAATTTTATTCTGCCGGT ACTTTCAAAATGTATGTCTGTTTTATGTTTTAGTGAATTTTATTTTAAAAATTGATTATTCGTATGTATATGCTATTTGC TAGGCGAACATTACATCATGAATTTGGCTCCTCTAACTCTAAAGTGTAAAGTAAGTCATTGCAGCCGTTTATTGAAAAAT CAACAGTTGTGATTGTAGTCGCATACTTGCACATATACAGTACATTATGATATAGTTTAAATCACAATTATTGATTTTTC AATCAACAACTGTGATGACTTATTTTATCTTCTAAAGTGAGTTTCTCTTAATGACAAAACCTTACATCATATATCTTGGA CCTAAAGGAAAACAACTTAGGAATGATCTATAATATATTGCACCACTGGGGCATAAATTCTACTACTAAAGAGGTCTTGA GTCCAAAATTCCTCCTCAAAATCTACCACTTAAACTGAACTTTCTCTTATTCAACATACACTTCAAGTGACTACCACAGC AGTGGGAGCTTCTGAAAAACACAGGTGAGATTTACTTGCTTGTGTGTGTGGATATGTTGGATTGAAACTTGACCACTTCA TTTGCATGAAGCTTCTCTTCCTCCACGGTCCCAGATGCATTTTCTTCTCCTTCATTGATTTCTTTGCGGCACCACACATG ACCCTAACAATGGCAGTTAGGTACTCCTGTTTCCCAATGTAAAATTCTGGCAAACAAGACACGAGTTTCTGGTATTCCTC ACATGCTTTTGCAATCTGAAACTGATCCCTGAATACCAATTCAATCAGAAATGGGATTTGCTTCTTTGTTTTTGATGTGC TCGCGATCACTTCAATGTACTCGTGAGATCCTAAAATACAAAAGCAACAAAAACTGAAATTTGGTACATAAAATATGATG CTTGGTGAATGAATAATACTAATTTCAGACACAGACCTCCTAGAAACTTTTTTGTTGCTGACCATTTTGATATGCAAAGG TTGGTAGTTATTCCTCTGTTGCAGAGCACAGAAACAACTTGTCTTTTGAAACATGCGGTGCAATTGGAAGAGTTAGGACT GAAGCAGCTGCAAAAATCTGAAGCTTTCACCATTTCTATAATTCGACCAACCTCGTGTCTTAATTTTGACCCGCTTGCAT GGTACCGCTCCAAAATTTCCTAAAACAGATAAAATACAAGATATTGGAATCATAAATTAAGTTTTTTTACACATTAGTTT TTTATTTCGAAAATATCTGTCACTCTAAAACATTAGTATCTTTTTATGTGAAAACTAAACACTGAAAACGTGTTTGGTGA CTAAAAAATCAATTTCAAAAGGAAGTGCATTATAGACAGTAGTGGACAAATGACAACTGTGTCGTTGTATGTGGTTCAAA TTATTCCAATATCTGTGGTGTAGATTTCAAAATAATTCATATAGAATCACGTTCTTCATATGCTGTTTGGAGACTGGAGT AAATGTAGGGATGGCAATTTTGTCCAAACTCATGGGTACCCGCCCGATCCCGATCTGATTTGACGGGCAAAATCCGAGTT GACTGGATTTGGGTTTGGGTTTGGGTTTTGCCCATTACTGTAGCCATTTATGGGTTTGGGTTTGGTATTAGTTAAATCCG TGCCCATACCCGCCCAAACCCGAACCCAAAGATACCCGAAACATAAAATTACAAAAAAACCCTCATACATATATATATTT ATAAACTTTGTTCTTAGTGTTTGATGATTAATTGTACTTTTGTATGTTTGAGAAAGTAAACTCTAAACTATTGTTGTCTC ACTTTAGTGATGGATGAGGATGATGAATAGTATTTGTTTTTTTTTTTCTTTCTATGAATTTCACTTTTTTTTTATATGAA AGTAAGTTCTGGATTGAGTTGCTACGTAACTAATGGGTTTGGGTTTCGGGTAAATCCGAAACCCAATGGATTTGGGCATG GATTTCATTTTATCGCCCATAAGGTTTGTGTTTGGGTTTAGGTTTGGGTTCTAGGATTTGGGTTTGGGTTTGGTAATTGT AAAACCCGTGCCCGATCCTACCCGTTGCCATCCCTAAGTAAATGGTTGTTTCATAAATCCCACAGCTGAATTGAAGTATC TAAAAGTATCTACAAAATTGACCCAAAAAAATGAGTATCCACAAAAAAATCATTTCAATATCAAAGCATTTATTGACCCC CAAAAAAAGTGTCAAAGCATTTAGGGTATACTATCTTTTAGTTCCGTGAAAATAGTATCTATATTTAATTTTAGTCATTA ATTTTTTATTTTCTAAAATAGGCTTGCTTTATTTTTCAACTTAAACTATTTGAAAAAAGAATGAGCTATAACTACCCTAA ACAATATAGAGAGTATACACTTCACATACGCAGAT
CDS sequence (LotjaGi2g1v0445100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTACAGAAGCAGCAATATTGTGGCTAGGATTTTCGATCGTCAACTTCGCACTCCTGCTCCTGGCACTAGTGTTCA TCATGCTCGCAAATTCTATGAAAACTTAGTACCTAGTTACACAGTCTATGAGGTTGAGTGCCCGGACCATTCGTTTCGTA AATTCACAGATGATGGTCAATACCTTATAAGTTTCAGCAGAAATCATCAAGAGTTGATTGTTTATAGGCCTAGGTGGCTT TCCTTTTCATGCAAAGATGAAGATTGTGACCAGCATGATTTGCCATCAAAAGCAAAGAGATTTGATAGTTTTTTCACTCA ATTATATTGTGTGCCTCTTGCCTCTTGCAATGAACTTATATGTAAAGATTTTTTTCTTTACATGGAGAGTAATCAATTTG GACTGTTTGCTACTTCTACTGCCCAAATACATGATGCGCCTGCTGTTGGAGGAGCTGTCCAGGGTGTTCCTTCAATTGAA AAGATAACTTTTCACCTCTTGAGATTGGAAGATGGATCAATCCTGGATAAGAAGGTCTTCTGTAATGACTTTGTTAATTT GACTCATAATATGGGGGTCTTCTTGTATGATGACCTACTGGCAATTGTATCACTTCGCTATCAAACCATACACATTCTTC AAATTAGGGACTCTGGAAACCTTGTAGATGTACGTGCTATTGGGGAATTCTGCCGTGAAGATGATGAACTTTTTCTCAAC TCAAATGCTCAGTACATGGCATTGTCTGACAAAAACCAACAGCATCAGTTGCCTGGGAACCACACAGAAAATAACATACA TCAAGATCAAGGCCAGCCTAATCTGGGGAGGTCTTTTCTAAGTGGTATAAAGCAGCGATTGCTTTCATTCATATTCCAGG GACTATGGAATGAAGAAAGAGATGATACCTTGAGGGTCCAAGGACTAAGGAAGAAGTTTTATTTCCACTTTCAAGATTAT GTTGATTTGATTATCTGGAAGGTGCAATTCATGGACAGACATCACTTGCTAATCAAGTTTGGTAGTGTAGATGGAGGGGT GTCGCGAAATGCTGATCACCACCCAGCTTTTGTTGCTGTGTATAACATGGATACAACTGAAATTGTATCTTTTTATCAGA ATTCAGCAGATGAGCTATACACGTTGTTTGAGCAGTTCTGTGACCACTTCCATGCAACGTCAAGGAATTCAATGTATATG AATTTCATATCATCTCATTCAAATAATATTCATGCACTGGAGCAGCTAAGAAGCATAAAAGATAAGGCAAGCAACTCTTC ACAGTTTGTGAAGAAGATGCTTGCCTCTTTGCCTTTCAGTTGTCAGTCACAGAGTCCTTCTCCTTACTTTGACCAATCTC TTTTCCGGTTTGATGATAAGCTGATTTCTGCAACAGATCGGCATAGGCAATCAACTGACCATCCAATCAAGTTCATTTTA AGGAAACCTCCGTATTCTCTCAAATTTAAGATTAAGCCAGGTCCTGAAGCTGGTAGTATGGATGGTCGTGCAAAAAAGAT CTCTTCGTTTCTTTTTCATCCAATTTTGCCCCTTGCTCTATCTGTTCAACAGACTCTGTTCTTGCAGCCTTCAGTTGTAA ATATTCACTTTCGAAGATGA
Protein sequence (LotjaGi2g1v0445100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFYRSSNIVARIFDRQLRTPAPGTSVHHARKFYENLVPSYTVYEVECPDHSFRKFTDDGQYLISFSRNHQELIVYRPRWL SFSCKDEDCDQHDLPSKAKRFDSFFTQLYCVPLASCNELICKDFFLYMESNQFGLFATSTAQIHDAPAVGGAVQGVPSIE KITFHLLRLEDGSILDKKVFCNDFVNLTHNMGVFLYDDLLAIVSLRYQTIHILQIRDSGNLVDVRAIGEFCREDDELFLN SNAQYMALSDKNQQHQLPGNHTENNIHQDQGQPNLGRSFLSGIKQRLLSFIFQGLWNEERDDTLRVQGLRKKFYFHFQDY VDLIIWKVQFMDRHHLLIKFGSVDGGVSRNADHHPAFVAVYNMDTTEIVSFYQNSADELYTLFEQFCDHFHATSRNSMYM NFISSHSNNIHALEQLRSIKDKASNSSQFVKKMLASLPFSCQSQSPSPYFDQSLFRFDDKLISATDRHRQSTDHPIKFIL RKPPYSLKFKIKPGPEAGSMDGRAKKISSFLFHPILPLALSVQQTLFLQPSVVNIHFRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 538 | 535 | 2.5E-238 | ||
| Pfam | 122 | 539 | 418 | 7.4E-150 | ||
| SUPERFAMILY | 292 | 454 | 163 | 7.14E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi2g1v0445100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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