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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0445300 |
| Transcript ID | LotjaGi2g1v0445300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidylprolyl isomerase; TAIR: AT4G25340.1 FK506 BINDING PROTEIN 53; Swiss-Prot: sp|Q93ZG9|FKB53_ARATH Peptidyl-prolyl cis-trans isomerase FKBP53; TrEMBL-Plants: tr|A0A151SCX5|A0A151SCX5_CAJCA Peptidylprolyl isomerase; Found in the gene: LotjaGi2g1v0445300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94050675..94054981) extracted from Lotus japonicus Gifu genome v1.2.
TGAACGAGGAATGAGCTGGGCCTAATAAGCGAACGGCAGGGCTAATCCCAAAACGGCGCCCACCTGTGGTTTAGGGTTTA AAGAAGTTGGAACCCAGCCAGAGACGAGTTACGTTCAAGAACAACAATGGGGTTCTGGGGTTAGTCTCTGTCTCTGTCTC TGTATTTGGTTTCTGTGTTCAAATTTTCTGTTTCTCTTATTCATTGTCTGCATGTTTCTTTCTTGTTTTGAGCTCAGGTA TTGAAGTCAAACCTGGCAAACCATATCCTTATCATTCAGACAACATCCCAGGAAAGCTTCATGTCACTCAGGTTTGTAAC AGACACATTTCTTTATTTTTTCCCCTATCTTTGATATGCTTCTTACAATATTTTCCTGTTATTGTCTTGTAATTATGTCC AATTAGCTCTCAGCAAGCAATTTTTTGTGATGATTAGCTTTAAGGGTTCAAGTTTAATTTCCATGCGGATTTTAATTTAA CATGGATGATTAGCTAAGAATTATTGGATTTCAATATGATCTTTGTACGCACATATAATTATATGCATTGGTTTTCATTG GCACTTAGGGTCTGGAGTTTGATATTTTTTAAGCTAGAATTCCTGTCATTAAATTTCAGGCTACACTAGGCAATGGCTCA TCGACGGAGAAAAGTATTCTTCAGTGTGCTTCTGGACACAAAAGTCCTGTTTTCTTGTGTTCGTTGCTACCAGAAAAGAT AGAGTCATGCTCTTTGGATCTTGAGTTTGATGAGGATGACTTAGTCGCATTCTCTGTGCTTGGTTCACGGAGCATCCATC TTTCTGGTTATTTTGTGGCAGACAGCCCGGATGAACACCTCGGGGATGAATATGAATAGTATCCTTTTGTTGGTTAATTT GCACTTTTTTCAAATTATATAGTTATGTCTTAGACAGGGTGATTGTTATACATGTAAATAGCTATCTTCCTTAATCTGTT GCTACAGTGATTCATTGGGAGAGGATATTGCGGAAACTGAGTCTGAGTCAGATGAGTCAACTGATTATGATAGTGAAGAT GATTATGGTGATGATTTCATTGATGATAGTGATTTTGAAATGTACCCATCTTCGCCAGTCCCAAACAGTGGAGGTATTTT GAATATATTATTGACTTTTCTTGAAGCCATTAAACGATTATACATACATTCTTCTCTTTTCATATGTTTTTTCTCTTATT ATCATTTTTTCTGACTGATGCTCATGGTGTGTGTTTTTATACTTATAGATACTCAAATATCAAATTTTCATAAAAACTTT TAAATAGTATGAAATACTGTATGGCTATTTTGGTGTGTAGAATGATCTGAGAAATTTTGCAACTAGTTGTTTGCTTCATA AATATGTAATAACAGATATGCTCTCACACTTTAATTGTAATGATATATGTTTTATCAAAACATTGCTGTCATAAGTCATA AATAATAATGGTAGTCATTCTTATTGCTGCCTGCATCCTACGCATTATTTATTCTCATATTCTCAATACATGAAAACAGT AAATAAAACTGAAAATGCAAGGAAAAGTTGAGTGAAGTTCTACTGCTAGTAGTTCACAAGAATTTTTAATTGATATCAAT GGGATTATATGTCTTTTTGTTTATTTACATTTCATACAGTTATAATGTTTATTTACATTTCATACAGTTATAATTGAGGA AATAGTAGACGAACCTGAGAATGAGAATGGAGATGATTCGAATAAGCAATTGAAGAAAAAGGAACAGGTGCCTCGCTTGA AAGAGAAACACAGCAAAGGTTCTCAGCTTCAAATTGTCAATAAGGGGGAGAATGACCTTGTTTTGGAAAGTGAAGATGAA GACGGCTTTCCACTTTCCAATGCAGAGAAAGGTAAATCTGAATCTGAGTCTCAGAAGGCTGAATCAGAAATAAAAGACCA GACTAAGAGAACTAACAAGGCCAATAAGAAGGCGAAAGATGTTGATCATTCCGCGACCTTAAAACGAAAAGTCGAAAGTG TCGTTGAAGATGAGCAGCTGCAAGATGGGTGAGATGAGTTTATCCGTTCAATAATTTCTGAGTTCATTAATTTCTGATAG TGGATTTCAACCTGATGTTTCCACAGCCCATCCTTTTTTCTAGAACTAGAATAGGAAAAAGTGACATGTCTTTTACTTTT TATGTTGGTTGCGTTGCACTGAATGTTTCTGCTATTTATTTCAGGAAAAAGAAGAAGAAGAAAAATAGTAAGTTGAAAGA ACAGGGTAAAGGGGAAAAAGCTCATGCATCTGCAAAGAGCAATGAGACTAACGTTAATACACCAGTTGAAAAACATAATG AGGAGGCTGAAACTACACCAGATCTGAACAACGTCTCTCATTCAAAGGATGGGCATGATGGAAAACTATCCAATAACGAG TAAGAGCTTTCATCTGAATAACTAGAATATCAATTATGAACAGGGCTTTTGGGAGTATGGAAAGTTGATTGAAATATTTA ATGCTTTTGAAATTTAGGAGGCTGGATTTTCTCCTCCTTGGTTGCATTCTTCATAATGCTAATTGTTTGAGTGTGGTGTT TGTGGACAGGGTTGTTGAGAAGAAAAAAAACAAGAAAAAGAAGAAGACCCAGGAGTCTGAAGGAGTAGCCACTGGAAATC AAGTTGCTACACCTGTTGAGAAACAGAATTTGCTTACCACTGAGAAAAAAGGGAAGGAACAGAGTGAAGCCAAGCCATCT CATATCAGAACCTTTGCAAATGGGTTGGTTATAGAGGAGCTATCCATGGGTAAACCAGATGGCAAAAGAGCTACTCCTGG ACAAAAGGTTACCCATCATCTACTGATAGTTTATTGGTTGAATTAACATAGCTTACTAATGAGTAATTTTGTGTAACATG TTTTATAATTTACTATCTTCTAATAGAAACTTCGTGTTTGATTTCAGGTCAGTGTTAAATACATTGGCAAGCTGAAAAAG AATGACAAAATATTTGACTCAAATGTGGGAAAAGCACCCTTTAAATTCCGCCTAGGTATTCTTTTTTCCTGATACCTTGA ATTTGCGGGGATTTTTCCGTTCCTATATATATGCATTTACCAACCTTCTTTGGTGTTTGCAGGTATAGGGCAAGTCATCA AGGGGTGGGATGTTGGTGTCAATGGTAATTAATATATATATATATATATATATATATAGTATTAACGTGAGATTCTATGC AGTTTACTTTAATGTTATTCTTAAATCTTAATACTTATTTGCATTTCCCTTTTATTTTTAACAGGGATGAGGGTTGGGGA CAAAAGAAGAATCACAATTCCACCATCTATGGGGTATGAAATTGCTCTATGTCTTCTTTTCTTTGTGTAATTAAATTAGA TTCACTGTAAGCTTTGACTTTTGTTGGATATTGTTCATAAAATTATATCGTAACATTCTGACTAGATATAAATCCTTTCC TTTATGGTTGTCTATGATTAGTTTGATCTGGTTTTATTGCTGAGAATAGTGTTTGTTGTTTGTGCTAAGTGTTTTGTTTA TGCGCAGATATGCCGACAAACGCGTCGGAAGTATACCAGCAAATTCGTGGCTTGTATTTGATGTGGAGTTAGTTGGTGTT GGTCGCTGAGTTCAACTTTTACATCAAGGCTGAGAAAAATGTTAAACCTAGCTCACATTAATCATTTACCATTGCGGGAT TGTCATGATACTTTCTTATATTAGAGGTGAAGTTTTGTAGGAAATTTTGGATTGAAATAGGCCCATTCATTCACAGCTTT ACGAATATGAACTTTCAACTATATAGTTTATGGTTGTTTTTCACTATCAATACTCCATAGTGTTCAGCTTCTTTGAAATG CATTTCAAGAAGGATTTAAATTTGTGTTCAATTTTTTGGTTAATTTTTTTCCCGTTTTATGTTGGATAGATTTAAGTTTT GATCTTTGATCTAATTAAGTTTGAAAGAATGAATTTCTGTTTTTTTTTTGTATGTATATATATATGTTTATAAATATGAG TGCTGTTTGGATAGTAGATTATTAAGATAGATATAAGATGATATGTAAATGAGAAGTTTCAAAATAGGTAATATTGTAAA TAAAATATGTGAAGTTTCCCTTAACGGAAATTTTTTTATGGCCATAGTTTTTCAATTGTAAGCACGAAGCGGAATGAATC AATGAATCATGTGTGATGCGGTTACATGTCTACTTGAAAGTAAATGTTCACATAATTCCAAAACATTTCATGAACACACG TGAGACTAATCTCTCAGGGCTTTGTAATTACCTATAGCGGATAGACTTCTCTCAATAAATTTTTTTC
CDS sequence (LotjaGi2g1v0445300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTTCTGGGGTATTGAAGTCAAACCTGGCAAACCATATCCTTATCATTCAGACAACATCCCAGGAAAGCTTCATGT CACTCAGGCTACACTAGGCAATGGCTCATCGACGGAGAAAAGTATTCTTCAGTGTGCTTCTGGACACAAAAGTCCTGTTT TCTTGTGTTCGTTGCTACCAGAAAAGATAGAGTCATGCTCTTTGGATCTTGAGTTTGATGAGGATGACTTAGTCGCATTC TCTGTGCTTGGTTCACGGAGCATCCATCTTTCTGGTTATTTTGTGGCAGACAGCCCGGATGAACACCTCGGGGATGAATA TGAATATGATTCATTGGGAGAGGATATTGCGGAAACTGAGTCTGAGTCAGATGAGTCAACTGATTATGATAGTGAAGATG ATTATGGTGATGATTTCATTGATGATAGTGATTTTGAAATGTACCCATCTTCGCCAGTCCCAAACAGTGGAGTTATAATT GAGGAAATAGTAGACGAACCTGAGAATGAGAATGGAGATGATTCGAATAAGCAATTGAAGAAAAAGGAACAGGTGCCTCG CTTGAAAGAGAAACACAGCAAAGGTTCTCAGCTTCAAATTGTCAATAAGGGGGAGAATGACCTTGTTTTGGAAAGTGAAG ATGAAGACGGCTTTCCACTTTCCAATGCAGAGAAAGGTAAATCTGAATCTGAGTCTCAGAAGGCTGAATCAGAAATAAAA GACCAGACTAAGAGAACTAACAAGGCCAATAAGAAGGCGAAAGATGTTGATCATTCCGCGACCTTAAAACGAAAAGTCGA AAGTGTCGTTGAAGATGAGCAGCTGCAAGATGGGAAAAAGAAGAAGAAGAAAAATAGTAAGTTGAAAGAACAGGGTAAAG GGGAAAAAGCTCATGCATCTGCAAAGAGCAATGAGACTAACGTTAATACACCAGTTGAAAAACATAATGAGGAGGCTGAA ACTACACCAGATCTGAACAACGTCTCTCATTCAAAGGATGGGCATGATGGAAAACTATCCAATAACGAGGTTGTTGAGAA GAAAAAAAACAAGAAAAAGAAGAAGACCCAGGAGTCTGAAGGAGTAGCCACTGGAAATCAAGTTGCTACACCTGTTGAGA AACAGAATTTGCTTACCACTGAGAAAAAAGGGAAGGAACAGAGTGAAGCCAAGCCATCTCATATCAGAACCTTTGCAAAT GGGTTGGTTATAGAGGAGCTATCCATGGGTAAACCAGATGGCAAAAGAGCTACTCCTGGACAAAAGGTCAGTGTTAAATA CATTGGCAAGCTGAAAAAGAATGACAAAATATTTGACTCAAATGTGGGAAAAGCACCCTTTAAATTCCGCCTAGGTATAG GGCAAGTCATCAAGGGGTGGGATGTTGGTGTCAATGGGATGAGGGTTGGGGACAAAAGAAGAATCACAATTCCACCATCT ATGGGATATGCCGACAAACGCGTCGGAAGTATACCAGCAAATTCGTGGCTTGTATTTGATGTGGAGTTAGTTGGTGTTGG TCGCTGA
Protein sequence (LotjaGi2g1v0445300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFWGIEVKPGKPYPYHSDNIPGKLHVTQATLGNGSSTEKSILQCASGHKSPVFLCSLLPEKIESCSLDLEFDEDDLVAF SVLGSRSIHLSGYFVADSPDEHLGDEYEYDSLGEDIAETESESDESTDYDSEDDYGDDFIDDSDFEMYPSSPVPNSGVII EEIVDEPENENGDDSNKQLKKKEQVPRLKEKHSKGSQLQIVNKGENDLVLESEDEDGFPLSNAEKGKSESESQKAESEIK DQTKRTNKANKKAKDVDHSATLKRKVESVVEDEQLQDGKKKKKKNSKLKEQGKGEKAHASAKSNETNVNTPVEKHNEEAE TTPDLNNVSHSKDGHDGKLSNNEVVEKKKNKKKKKTQESEGVATGNQVATPVEKQNLLTTEKKGKEQSEAKPSHIRTFAN GLVIEELSMGKPDGKRATPGQKVSVKYIGKLKKNDKIFDSNVGKAPFKFRLGIGQVIKGWDVGVNGMRVGDKRRITIPPS MGYADKRVGSIPANSWLVFDVELVGVGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 53 | 53 | 14.0 | ||
| Gene3D | 1 | 100 | 100 | 2.8E-14 | – | |
| Pfam | 3 | 95 | 93 | 1.8E-19 | ||
| SUPERFAMILY | 3 | 93 | 91 | 5.89E-5 | ||
| PANTHER | 4 | 246 | 243 | 1.6E-127 | – | |
| PANTHER | 4 | 246 | 243 | 1.6E-127 | – | |
| PIRSF | 47 | 287 | 241 | 2.2E-13 | ||
| MobiDBLite | 117 | 144 | 28 | - | – | |
| MobiDBLite | 117 | 155 | 39 | - | – | |
| MobiDBLite | 167 | 392 | 226 | - | – | |
| MobiDBLite | 170 | 196 | 27 | - | – | |
| PIRSF | 197 | 320 | 124 | 280.0 | ||
| MobiDBLite | 218 | 280 | 63 | - | – | |
| Coils | 232 | 252 | 21 | - | – | |
| PANTHER | 270 | 506 | 237 | 1.6E-127 | – | |
| PANTHER | 270 | 506 | 237 | 1.6E-127 | – | |
| PIRSF | 284 | 507 | 224 | 3.2E-49 | ||
| MobiDBLite | 329 | 359 | 31 | - | – | |
| SUPERFAMILY | 343 | 506 | 164 | 3.93E-34 | – | |
| MobiDBLite | 360 | 377 | 18 | - | – | |
| Gene3D | 364 | 507 | 144 | 1.7E-38 | – | |
| MobiDBLite | 378 | 392 | 15 | - | – | |
| Pfam | 415 | 504 | 90 | 4.0E-28 | ||
| ProSiteProfiles | 420 | 507 | 88 | 24.774 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). |
Expression pattern of LotjaGi2g1v0445300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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