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LotjaGi2g1v0449300.2

Overview

Field Value
Gene ID LotjaGi2g1v0449300
Transcript ID LotjaGi2g1v0449300.2
Related isoforms 9
Lotus japonicus genome version Gifu v1.2
Description Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P23569|CHSY_PUEML Chalcone synthase; TrEMBL-Plants: tr|I3S104|I3S104_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0449300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:94297258..94304292) extracted from Lotus japonicus Gifu genome v1.2.

CATGGTCACTAATTGTTGAATGAACAAACAAACTCCAATCACCTTCATTTCCCCATCCACCCACCCACCTTCACTTCGCA CACATATAAAAACCTATCTCCCCACCCAAGTTTCCACCACAACTCTCATACAACATCTAGTACTGCAACTAAGTGTATCT TGAGAGCTCAATTTTGCAGTGCTTCATTTGTAATCCAGATTTCTATCATTCCCAAGAAACTTAAAGATGGTGAGTGTAGC TGAGATTCGCAAGGCTCAAAGAGCTGAAGGCCCAGCAACCATCTTCGCTATTGGCACCGCAAATCCTCCAAACTGTGTTG ATCAAAGCACATATCCTGATTTCTACTTCAGAGTCACTAACAGTGAGCACAAAACAGAGCTCAAGGAGAAATTTCAGCGC ATGTGTAAGCATTCTTTTCTTGGTCTCTCCATTTTTTTCTATATAACATTCATTTACATTGCCAGACTAGTCATTATCAG ATTGATTTTATTGTACTAATGTTGTTTCTTTATAATTGATTTCAGGTGACAAGTCTATGATCAAGAAGAGATATATGCAC TTGACTGAAGATCTTTTGAAAGAGAACCCGAACATGTGCGCTTATATGGCACCTTCTCTGGATGCTAGGCAAGACATGGT GGTTGTAGAAGTACCTAGACTAGGCAAAGAAGCTGCTGTCAAGGCTATCAAAGAATGGGGTCAGCCTAAGTCCAAGATTA CCCACTTAATCTTCTGCACCACAAGTGGTGTAGACATGCCCGGTGCTGATTACCAACTCACCAAACTCTTAGGTCTTCGC CCTTATGTGAAAAGGTACATGATGTACCAACAAGGGTGCTTTGCAGGTGGCACGGTGCTTCGTTTGGCTAAAGACTTGGC TGAGAACAACAAAGGTGCCCGTGTCCTAGTTGTTTGTTCTGAACTTACTGCAGTTACCTTCCGTGGCCCTAGTGACACTC ACCTAGACAGCCTTGTTGGGCAAGCTTTGTTCGGAGACGGAGCAGCTGCACTCATTGTTGGTTCCGATCCAGTGCCAGAA GTTGAGAAACCTTTGTTTGAGCTAGTTTGGACTGCACAAACTATTGCTCCAGATAGTGAAGGAGCCATTGATGGTCACCT TCGGGAAGTTGGATTGACCTTTCATCTCCTTAAAGATGTCCCTGGGATTGTTTCAAAGAACATTGAGAAAGCACTAATTG AGGCCTTCCAACCATTAGGCATATCTGATTACAACTCAATTTTTTGGATTGCACACCCAGGTGGCCCAGCAATTCTTGAC CAAGTTGAGCAGAAGTTGGCCTTGAAACCTGAAAAGATGAGGGCCACTAGAGAAGTGCTAAGTGAATATGGTAACATGTC AAGTGCATGTGTCCTTTTCATCTTAGATGAAATGAGAAAGAAATCAGCTCAAAATGGACTCAAAACCACTGGTGAAGGAC TGGAATGGGGTGTGTTATTCGGTTTTGGACCTGGACTTACCATTGAAACAGTTGTTTTGCGTAGTGTGGCTATTTAATAT GCTTGATTATTTGATTATTTTGTAACACTCACAAACTCACTAGATTTTGTATCTATGAGAAAGAAAATAAGCTCATATTG AGTTTGATTATGTATGTTCAAATTAAAATAATGAATGACTAATTGCTTTTATTTGTTTGAATGAATACTTTAAAGCTAAA AGATAAGTTATCTGAGGGATTATCACTGTAATCTCATATTGGCCAGCTCTTCTAATCATTCTCTAGGTAATAATTCTCAC CCGCTTGCGTCAGTTCTCTCATATGATCAGTGTTCCCCCTGTTTATAGAAGTTTTTGGTGCTCTATTACAACTAACATTG GGCCAAGATCTTATAAAGAGGTAGAACTATGAACAAGGTATATTAATGGAGCTTTAAGGTTTGTATGAGCAAGCCATATT AATGAATCTTTCTATGAGTTGTTCTCTCATGAAAGGTGGAATTATGAGCAAGGTATATTATGAGCAAGTTTTTGTTCCCT CCTTTAAAATTTTCAAATTACATGAATGGAGCTTTGTTTTCTGTTAGCTAGTGGTTTCAAGGATTTTTTTTGTTGCGTCA ATTTAACAAACGTAGAACCAAAAGTCCTGAAGCATTGTTTTCAGATCACCAGTGTCTACTCCATGTACTCCTTCACTTCG CTTGCAAGCTGATCAAGGGCAACCTCTTTCAGATCCTACAGCCTACAGAAGATTGGTTCACGCCTTCTTTATTTAACTAC AACTCGGCCAGACATGAATTTTGCAGTTCAACAGTTGTCACAGTTTATTTTCAATCCTATGGTTTCTCATCATGAGGCAG CTCTTCGGGTTCTAAGATACATCAAGAAATCTCTTGCTTCTGGTTTATTTTTCTCTGCTTATTCTACAATTTTGCTGGCT TTGCTTATTCAGACTGGGCTTGTTTCCCTGATACAAGGAAATCTACAACAGGTTATTGTGTTTTCTTAGCTAGTCTTACT TGTGAAATACAATGGCATCCTAATGTTCTTCATGTTGATTTTTCTCCATGCTTCTATTTATTGTGATAAAAAGTGATCAG TCATATACCTTACTCATAATTCCACCTTTCATGAGAGGACAAAACACATAGAAAGTGATTAGCATATAATTCGTGAGAAG GTTCAATCTGGCTTAATTCAGTAGTTAGTGGCATGTTGGTTATTAGAGAACTTGTAGTGTGTTATATAAAGTAGTTTTAT GTTTTCATTCTCTTGACTGTTGTATTGAAGTCTTCATTCTGCAATTTGAAGTCTTCACTTACATTGTGTATAAAAGCTAC TCTATGAACAATTCATCATTGAGTTCAATAAATATTCAATCATTTAACTTTGTGACGGAAACTAATTCGTTACAAAATCC TAGCATAATATAAGGAAAAGGTGACGGAATGTGGGAAGAGAATTATCCGTCACAAAAAATCCGTTGCTTGAAATTGCGAC GGACATTTCCCTCTCTAAATTCCGTCGTTAAGTCTTCTCTTATTATTCACTAGAATTTTGTGACGTTTAAACTTCGTCGC AAATAATTTTCCGTCGCTAAATTATTTGCGACGGAATTTCTATATCCATATTCCGTCACTATTTCATTTAATATCATATG CTAGGACTTTGTGACGGATTTTTCCGTCACTAAAAAAGAAAGTAAAAAAAAAAAGAGGCATCACCACTGGTGGCGTTTTA TACTAATTTCGTAATTAAAAAAAATTGCACTACTTTAATAATTATTTGTATAAAGCACACTGCATGTAAAATAACCAAAT TAGAAATAAACACACACATAATATAATATTCATCATAAGATAGAAATTTCACAATAAACTTTGGTAAGCCCAAAACGATG TAAAATAAGACAACAACATGTTCCCTAAAACTAAGCTTCAGGAATTATGTTTAGATTACTCACCAACAATCTCAACATGC CCCCAAAATCACATTCCAAACCATCAAATTCGTTGTTTGCCATTTAATTTGCCCGAAATACTGAATGAAAAATCACAAAA TTCTATAAGTGTGAAAAATTTGCCAAACAAAAGAATCGAAACCGTGTAATTGAGTGAAACTAACCTTAATAAAAGTTAAT AATGGTAATTAACTTTTTACAAAAAAAATATTATTTTAGAATAATGTATCATGGTGTATATATCATGGTATATTATTATT ATTAATTATTTTTATAATTATTTTCAAATATAGAGTGAGGGTATTTTGGTCAAGTCACATAAAATATCTCTTCTCCTCAA GTTTTCTAGCAAAACAATTTGTCTAAGCCTCAGCCTAATTTTTTTTCTCTCCGTATTTTCTTATGTACTAAGAGGAAGAA AAATTGTGTAATGTTTGTTCTCTTTGAGACATTTTCTATTCTCTTCCTATTTTCCTTTTCAAATGAAGCATTAAATTATC AAACCAAACGATGGGATGATTTGTTTTGCATATTTTCTTTCCTTTTTCCTCTCCCTCACTAAAACCAAAGGGAGCCTAAT TCTGATTAGGTCTAATGGTGGTAGGTGACCCGTGACCCCAAGCCTCCAACTGTCCAACCTTTGACCAATTCATAATTCAG CTACTCACATCATTGAAATTTGAAACTTTAAAAAATGAGAAAGAATACTCATTCACTTGGTTACAAAGAGAAAAAGTTGT GCCTTAATTTAATTGGATGATAATTTGGTCCTGAGACTGCATGTCTGCATCTACGTCTTTTTTCTTGTATTTGCATCAAT AACATACAAATAAAATAAGGACATAAAAGGGAGTGGTTAGTGTAATAAAATAAAATAAAAATTCTCAATAATTAAATTTG TTGAAAATCCCTATCCATATAGTATAACACAACACATCAAGAATTTTGCAATACAAATATTTTAAAATTAAATCAGATAG AAAGTGATTAATTTAAGTGATACATACTTAGTTCCATTTAAACAATTTCAAATATCACGTTTGAATGTGGTGGATGGACC ACTCTACAACCACAAAAGTGAGGTGTCTATTAATGGTCGACACACAGGCAGAAAGAGCAACGTAGACGTGGCAAAGCTAA TCATTGTTGTTTAGCAACTTGTCAAAACAAGAAGATATGAGGTCAATTACGAAGCACACTACCCCTAGGGCAACAAGCGT TGGAAATTAACTCAAAACAACTTATAGATAGATTATAAGTTATTTGAATAAGTTCACTTAAATACTCACATTAACATTTA TGCTTTAAGATAAGCTATTTAAAACACTCTCATATTCCAAGTTTAACCACATAAAGACTATTTTATATTTGGGTTGTGAT GCAGACGAGCTAGATCACAGTAAAAGTGTAGATACAAGTTTGAAATATGAAAAAATCATCTATTGGTAATTGGTAGAGAT TGTCATCATTTTTAGAATGAGATTACTGTTGCCAAGTATAGTCGGAACACCATCAAAGATGTAAAGACTAAAATGACGAG TTAACTTCGTAAGCTGCCGTTAGATTGAGCAGCCTAGCAAGACCTTGACTAAACTGCCATAGTCCCTGGTTTGGTGACGA AGCATTCAGCCAGCCATAGACCATATCACTATATATTATTGAACATTGAAAATGTTAGTCAGCACGTGAGCTTCAGCTAC CACCCTCCAATTCCCTTTCCCCATCCACCACCTTCCCACACAACACATGGATATAAATTGCTAGTTCCCCTCATTACTTT CCACAACCACAACTCTCTTACAGTACCAACAACAACCACTGCAACTAGAAAACTTCAGAAGAAAAGATGGTGAGTGTAGC TGAGATTCGTAAGGCCCAGAGGGCTGAAGGCCCAGCAACCATCCTGGCTATTGGCACTGCAAATCCACCAAACTGTGTCG ACCAAAGCACTTATCCTGATTTCTACTTCAAAATCACCAACAGCGAACACATGACAGAGCTTAAGGAGAAGTTTCAGCGC ATGTGTAAGCAATCTTTTTGTCTTTTTTAATCATCATTTATCAATTCCTAGACGTATCAGATTTGTAAAAGTTACTCACT CTTCAATCGGTCCATTAGAGTATAGACTTCAAAGAAATATATATACTACTTCTTAACAATACAATTTGCAAGACTAGTCA TTATCAAATTGATTTTGGTGTTGTAAACTGATGTTTTTTCTTTATAATTGATTTCAGGTGACAAGTCCATGATCAAGAAG AGATACATGTACTTGAATGAAGAAATTTTGAAAGAGAACCCCAACCTTTGTGCTTATATGGCACCATCTTTGGATGCTAG GCAGGACATGGTGGTGGTAGAGGTACCAAGGTTAGGGAAAGAAGCTGCAACAAAGGCTATAAAAGAATGGGGTCAACCAA AATCCAAGATTACCCACTTAATCTTCTGCACCACAAGTGGTGTAGACATGCCTGGTGCTGATTATCAACTCACCAAACTC TTGGGTCTTCGCCCATCTGTGAAAAGGTACATGATGTACCAACAAGGGTGCTTTGCAGGTGGCACGGTGCTTCGTTTGGC TAAAGACTTGGCTGAGAACAACAAAGGTGCACGTGTGCTAGTTGTTTGTTCTGAGATTACTGCGGTTACATTCCGTGGCC CTAATGACACTCACCTAGACAGCCTTGTGGGGCAAGCTTTGTTCGGAGACGGAGCAGCTGCGGTCATTGTTGGTTCTGAT CCAGTGCCTGAAATTGAGAAACCTTTGTTTGAACTAGTTTGGACTGCACAAACTATTGCTCCAGATAGTGACGGAGCCAT TGATGGTCACCTTCGTGAAGTTGGATTGACGTTCCATCTCCTTAAAGATGTTCCTGGGATTGTTTCAAAAAACATTGATA AAGCACTAGTTGAGGCCTTCCAACCATTGAACATATCTGATTACAACTCAATTTTTTGGATTGCACACCCAGGTGGCCCA GCAATTCTTGACCAAGTTGAGCAGAAGTTGGGTTTGAAACCTGAAAAGATGAAGGCCACTAGAAATGTGCTTAGTGATTA CGGTAACATGTCAAGTGCATGTGTCCTATTCATCTTAGATGAAATGAGAAAGAAGTCGGCTGAAAATGGACTTAAAACCA CAGGTGAAGGACTTGAATGGGGTGTGTTGTTTGGTTTTGGACCTGGACTTACCATTGAAACGGTTGTTCTGCGCAGTGTG GCTATATAATATGTTTAATTGTTTTGTTTTTATGTAACAAACTCAATAGAGTTTGTATCTACGAGGGGGGAAAACTCATC TTGAGTTTAATCATGTATTATCAATATTAAAATAATGAATGGTTAATAGCTTTATTTATTTGTTTGAAAAATTGTTCCTT TGCAATTATGAGATAAATCTTTGTCTGCACATAAAAGATGATAAAGAATCAAAGATGCTTGCAACTAGTTTCTTTGTTTG TTAAGTAATGTAAGTCATGCTTCTGACTCATAAGAGTTTGATTCGATTAAAATATATGTATTTTTTCCTCCTATCTGGTT TGGATCTAGAGGTTCTAAATTGGTATCTCACATGCCAGTTTCACCTCCCTTCCTCTCCGATTACTCCAAATCTTG
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0449300.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTGAGTGTAGCTGAGATTCGCAAGGCTCAAAGAGCTGAAGGCCCAGCAACCATCTTCGCTATTGGCACCGCAAATCC TCCAAACTGTGTTGATCAAAGCACATATCCTGATTTCTACTTCAGAGTCACTAACAGTGAGCACAAAACAGAGCTCAAGG AGAAATTTCAGCGCATGTGTGACAAGTCTATGATCAAGAAGAGATATATGCACTTGACTGAAGATCTTTTGAAAGAGAAC CCGAACATGTGCGCTTATATGGCACCTTCTCTGGATGCTAGGCAAGACATGGTGGTTGTAGAAGTACCTAGACTAGGCAA AGAAGCTGCTGTCAAGGCTATCAAAGAATGGGGTCAGCCTAAGTCCAAGATTACCCACTTAATCTTCTGCACCACAAGTG GTGTAGACATGCCCGGTGCTGATTACCAACTCACCAAACTCTTAGGTCTTCGCCCTTATGTGAAAAGGTACATGATGTAC CAACAAGGGTGCTTTGCAGGTGGCACGGTGCTTCGTTTGGCTAAAGACTTGGCTGAGAACAACAAAGGTGCACGTGTGCT AGTTGTTTGTTCTGAGATTACTGCGGTTACATTCCGTGGCCCTAATGACACTCACCTAGACAGCCTTGTGGGGCAAGCTT TGTTCGGAGACGGAGCAGCTGCGGTCATTGTTGGTTCTGATCCAGTGCCTGAAATTGAGAAACCTTTGTTTGAACTAGTT TGGACTGCACAAACTATTGCTCCAGATAGTGACGGAGCCATTGATGGTCACCTTCGTGAAGTTGGATTGACGTTCCATCT CCTTAAAGATGTTCCTGGGATTGTTTCAAAAAACATTGATAAAGCACTAGTTGAGGCCTTCCAACCATTGAACATATCTG ATTACAACTCAATTTTTTGGATTGCACACCCAGGTGGCCCAGCAATTCTTGACCAAGTTGAGCAGAAGTTGGGTTTGAAA CCTGAAAAGATGAAGGCCACTAGAAATGTGCTTAGTGATTACGGTAACATGTCAAGTGCATGTGTCCTATTCATCTTAGA TGAAATGAGAAAGAAGTCGGCTGAAAATGGACTTAAAACCACAGGTGAAGGACTTGAATGGGGTGTGTTGTTTGGTTTTG GACCTGGACTTACCATTGAAACGGTTGTTCTGCGCAGTGTGGCTATATAA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0449300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMCDKSMIKKRYMHLTEDLLKEN PNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY QQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFGDGAAAVIVGSDPVPEIEKPLFELV WTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLGLK PEKMKATRNVLSDYGNMSSACVLFILDEMRKKSAENGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF53901
1 233 233 2.07E-81
IPR016039
Gene3D
G3DSA:3.40.47.10
1 235 235 3.1E-93
IPR016039
PANTHER
PTHR11877:SF62
2 388 387 2.0E-257 –
PANTHER
PTHR11877
2 388 387 2.0E-257
IPR011141
PIRSF
PIRSF000451
2 389 388 1.0E-137
IPR011141
Pfam
PF00195
6 228 223 1.7E-122
IPR001099
CDD
cd00831
16 384 369 1.48209E-173 –
ProSitePatterns
PS00441
156 172 17 -
IPR018088
SUPERFAMILY
SSF53901
235 386 152 2.51E-51
IPR016039
Gene3D
G3DSA:3.40.47.10
236 389 154 3.4E-55
IPR016039
Pfam
PF02797
238 387 150 2.5E-69
IPR012328

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0009058
Biological process Biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Subterm of
GO:0016746
Molecular function Transferase activity, transferring acyl groups Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
Subterm of
GO:0016747
Molecular function Transferase activity, transferring acyl groups other than amino-acyl groups Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0449300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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