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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0449300 |
| Transcript ID | LotjaGi2g1v0449300.3 |
| Related isoforms 9 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P23569|CHSY_PUEML Chalcone synthase; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0449300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94297419..94304068) extracted from Lotus japonicus Gifu genome v1.2.
AGATGGTGAGTGTAGCTGAGATTCGCAAGGCTCAAAGAGCTGAAGGCCCAGCAACCATCTTCGCTATTGGCACCGCAAAT CCTCCAAACTGTGTTGATCAAAGCACATATCCTGATTTCTACTTCAGAGTCACTAACAGTGAGCACAAAACAGAGCTCAA GGAGAAATTTCAGCGCATGTGTAAGCATTCTTTTCTTGGTCTCTCCATTTTTTTCTATATAACATTCATTTACATTGCCA GACTAGTCATTATCAGATTGATTTTATTGTACTAATGTTGTTTCTTTATAATTGATTTCAGGTGACAAGTCTATGATCAA GAAGAGATATATGCACTTGACTGAAGATCTTTTGAAAGAGAACCCGAACATGTGCGCTTATATGGCACCTTCTCTGGATG CTAGGCAAGACATGGTGGTTGTAGAAGTACCTAGACTAGGCAAAGAAGCTGCTGTCAAGGCTATCAAAGAATGGGGTCAG CCTAAGTCCAAGATTACCCACTTAATCTTCTGCACCACAAGTGGTGTAGACATGCCCGGTGCTGATTACCAACTCACCAA ACTCTTAGGTCTTCGCCCTTATGTGAAAAGGTACATGATGTACCAACAAGGGTGCTTTGCAGGTGGCACGGTGCTTCGTT TGGCTAAAGACTTGGCTGAGAACAACAAAGGTGCCCGTGTCCTAGTTGTTTGTTCTGAACTTACTGCAGTTACCTTCCGT GGCCCTAGTGACACTCACCTAGACAGCCTTGTTGGGCAAGCTTTGTTCGGAGACGGAGCAGCTGCACTCATTGTTGGTTC CGATCCAGTGCCAGAAGTTGAGAAACCTTTGTTTGAGCTAGTTTGGACTGCACAAACTATTGCTCCAGATAGTGAAGGAG CCATTGATGGTCACCTTCGGGAAGTTGGATTGACCTTTCATCTCCTTAAAGATGTCCCTGGGATTGTTTCAAAGAACATT GAGAAAGCACTAATTGAGGCCTTCCAACCATTAGGCATATCTGATTACAACTCAATTTTTTGGATTGCACACCCAGGTGG CCCAGCAATTCTTGACCAAGTTGAGCAGAAGTTGGCCTTGAAACCTGAAAAGATGAGGGCCACTAGAGAAGTGCTAAGTG AATATGGTAACATGTCAAGTGCATGTGTCCTTTTCATCTTAGATGAAATGAGAAAGAAATCAGCTCAAAATGGACTCAAA ACCACTGGTGAAGGACTGGAATGGGGTGTGTTATTCGGTTTTGGACCTGGACTTACCATTGAAACAGTTGTTTTGCGTAG TGTGGCTATTTAATATGCTTGATTATTTGATTATTTTGTAACACTCACAAACTCACTAGATTTTGTATCTATGAGAAAGA AAATAAGCTCATATTGAGTTTGATTATGTATGTTCAAATTAAAATAATGAATGACTAATTGCTTTTATTTGTTTGAATGA ATACTTTAAAGCTAAAAGATAAGTTATCTGAGGGATTATCACTGTAATCTCATATTGGCCAGCTCTTCTAATCATTCTCT AGGTAATAATTCTCACCCGCTTGCGTCAGTTCTCTCATATGATCAGTGTTCCCCCTGTTTATAGAAGTTTTTGGTGCTCT ATTACAACTAACATTGGGCCAAGATCTTATAAAGAGGTAGAACTATGAACAAGGTATATTAATGGAGCTTTAAGGTTTGT ATGAGCAAGCCATATTAATGAATCTTTCTATGAGTTGTTCTCTCATGAAAGGTGGAATTATGAGCAAGGTATATTATGAG CAAGTTTTTGTTCCCTCCTTTAAAATTTTCAAATTACATGAATGGAGCTTTGTTTTCTGTTAGCTAGTGGTTTCAAGGAT TTTTTTTGTTGCGTCAATTTAACAAACGTAGAACCAAAAGTCCTGAAGCATTGTTTTCAGATCACCAGTGTCTACTCCAT GTACTCCTTCACTTCGCTTGCAAGCTGATCAAGGGCAACCTCTTTCAGATCCTACAGCCTACAGAAGATTGGTTCACGCC TTCTTTATTTAACTACAACTCGGCCAGACATGAATTTTGCAGTTCAACAGTTGTCACAGTTTATTTTCAATCCTATGGTT TCTCATCATGAGGCAGCTCTTCGGGTTCTAAGATACATCAAGAAATCTCTTGCTTCTGGTTTATTTTTCTCTGCTTATTC TACAATTTTGCTGGCTTTGCTTATTCAGACTGGGCTTGTTTCCCTGATACAAGGAAATCTACAACAGGTTATTGTGTTTT CTTAGCTAGTCTTACTTGTGAAATACAATGGCATCCTAATGTTCTTCATGTTGATTTTTCTCCATGCTTCTATTTATTGT GATAAAAAGTGATCAGTCATATACCTTACTCATAATTCCACCTTTCATGAGAGGACAAAACACATAGAAAGTGATTAGCA TATAATTCGTGAGAAGGTTCAATCTGGCTTAATTCAGTAGTTAGTGGCATGTTGGTTATTAGAGAACTTGTAGTGTGTTA TATAAAGTAGTTTTATGTTTTCATTCTCTTGACTGTTGTATTGAAGTCTTCATTCTGCAATTTGAAGTCTTCACTTACAT TGTGTATAAAAGCTACTCTATGAACAATTCATCATTGAGTTCAATAAATATTCAATCATTTAACTTTGTGACGGAAACTA ATTCGTTACAAAATCCTAGCATAATATAAGGAAAAGGTGACGGAATGTGGGAAGAGAATTATCCGTCACAAAAAATCCGT TGCTTGAAATTGCGACGGACATTTCCCTCTCTAAATTCCGTCGTTAAGTCTTCTCTTATTATTCACTAGAATTTTGTGAC GTTTAAACTTCGTCGCAAATAATTTTCCGTCGCTAAATTATTTGCGACGGAATTTCTATATCCATATTCCGTCACTATTT CATTTAATATCATATGCTAGGACTTTGTGACGGATTTTTCCGTCACTAAAAAAGAAAGTAAAAAAAAAAAGAGGCATCAC CACTGGTGGCGTTTTATACTAATTTCGTAATTAAAAAAAATTGCACTACTTTAATAATTATTTGTATAAAGCACACTGCA TGTAAAATAACCAAATTAGAAATAAACACACACATAATATAATATTCATCATAAGATAGAAATTTCACAATAAACTTTGG TAAGCCCAAAACGATGTAAAATAAGACAACAACATGTTCCCTAAAACTAAGCTTCAGGAATTATGTTTAGATTACTCACC AACAATCTCAACATGCCCCCAAAATCACATTCCAAACCATCAAATTCGTTGTTTGCCATTTAATTTGCCCGAAATACTGA ATGAAAAATCACAAAATTCTATAAGTGTGAAAAATTTGCCAAACAAAAGAATCGAAACCGTGTAATTGAGTGAAACTAAC CTTAATAAAAGTTAATAATGGTAATTAACTTTTTACAAAAAAAATATTATTTTAGAATAATGTATCATGGTGTATATATC ATGGTATATTATTATTATTAATTATTTTTATAATTATTTTCAAATATAGAGTGAGGGTATTTTGGTCAAGTCACATAAAA TATCTCTTCTCCTCAAGTTTTCTAGCAAAACAATTTGTCTAAGCCTCAGCCTAATTTTTTTTCTCTCCGTATTTTCTTAT GTACTAAGAGGAAGAAAAATTGTGTAATGTTTGTTCTCTTTGAGACATTTTCTATTCTCTTCCTATTTTCCTTTTCAAAT GAAGCATTAAATTATCAAACCAAACGATGGGATGATTTGTTTTGCATATTTTCTTTCCTTTTTCCTCTCCCTCACTAAAA CCAAAGGGAGCCTAATTCTGATTAGGTCTAATGGTGGTAGGTGACCCGTGACCCCAAGCCTCCAACTGTCCAACCTTTGA CCAATTCATAATTCAGCTACTCACATCATTGAAATTTGAAACTTTAAAAAATGAGAAAGAATACTCATTCACTTGGTTAC AAAGAGAAAAAGTTGTGCCTTAATTTAATTGGATGATAATTTGGTCCTGAGACTGCATGTCTGCATCTACGTCTTTTTTC TTGTATTTGCATCAATAACATACAAATAAAATAAGGACATAAAAGGGAGTGGTTAGTGTAATAAAATAAAATAAAAATTC TCAATAATTAAATTTGTTGAAAATCCCTATCCATATAGTATAACACAACACATCAAGAATTTTGCAATACAAATATTTTA AAATTAAATCAGATAGAAAGTGATTAATTTAAGTGATACATACTTAGTTCCATTTAAACAATTTCAAATATCACGTTTGA ATGTGGTGGATGGACCACTCTACAACCACAAAAGTGAGGTGTCTATTAATGGTCGACACACAGGCAGAAAGAGCAACGTA GACGTGGCAAAGCTAATCATTGTTGTTTAGCAACTTGTCAAAACAAGAAGATATGAGGTCAATTACGAAGCACACTACCC CTAGGGCAACAAGCGTTGGAAATTAACTCAAAACAACTTATAGATAGATTATAAGTTATTTGAATAAGTTCACTTAAATA CTCACATTAACATTTATGCTTTAAGATAAGCTATTTAAAACACTCTCATATTCCAAGTTTAACCACATAAAGACTATTTT ATATTTGGGTTGTGATGCAGACGAGCTAGATCACAGTAAAAGTGTAGATACAAGTTTGAAATATGAAAAAATCATCTATT GGTAATTGGTAGAGATTGTCATCATTTTTAGAATGAGATTACTGTTGCCAAGTATAGTCGGAACACCATCAAAGATGTAA AGACTAAAATGACGAGTTAACTTCGTAAGCTGCCGTTAGATTGAGCAGCCTAGCAAGACCTTGACTAAACTGCCATAGTC CCTGGTTTGGTGACGAAGCATTCAGCCAGCCATAGACCATATCACTATATATTATTGAACATTGAAAATGTTAGTCAGCA CGTGAGCTTCAGCTACCACCCTCCAATTCCCTTTCCCCATCCACCACCTTCCCACACAACACATGGATATAAATTGCTAG TTCCCCTCATTACTTTCCACAACCACAACTCTCTTACAGTACCAACAACAACCACTGCAACTAGAAAACTTCAGAAGAAA AGATGGTGAGTGTAGCTGAGATTCGTAAGGCCCAGAGGGCTGAAGGCCCAGCAACCATCCTGGCTATTGGCACTGCAAAT CCACCAAACTGTGTCGACCAAAGCACTTATCCTGATTTCTACTTCAAAATCACCAACAGCGAACACATGACAGAGCTTAA GGAGAAGTTTCAGCGCATGTGTAAGCAATCTTTTTGTCTTTTTTAATCATCATTTATCAATTCCTAGACGTATCAGATTT GTAAAAGTTACTCACTCTTCAATCGGTCCATTAGAGTATAGACTTCAAAGAAATATATATACTACTTCTTAACAATACAA TTTGCAAGACTAGTCATTATCAAATTGATTTTGGTGTTGTAAACTGATGTTTTTTCTTTATAATTGATTTCAGGTGACAA GTCCATGATCAAGAAGAGATACATGTACTTGAATGAAGAAATTTTGAAAGAGAACCCCAACCTTTGTGCTTATATGGCAC CATCTTTGGATGCTAGGCAGGACATGGTGGTGGTAGAGGTACCAAGGTTAGGGAAAGAAGCTGCAACAAAGGCTATAAAA GAATGGGGTCAACCAAAATCCAAGATTACCCACTTAATCTTCTGCACCACAAGTGGTGTAGACATGCCTGGTGCTGATTA TCAACTCACCAAACTCTTGGGTCTTCGCCCATCTGTGAAAAGGTACATGATGTACCAACAAGGGTGCTTTGCAGGTGGCA CGGTGCTTCGTTTGGCTAAAGACTTGGCTGAGAACAACAAAGGTGCACGTGTGCTAGTTGTTTGTTCTGAGATTACTGCG GTTACATTCCGTGGCCCTAATGACACTCACCTAGACAGCCTTGTGGGGCAAGCTTTGTTCGGAGACGGAGCAGCTGCGGT CATTGTTGGTTCTGATCCAGTGCCTGAAATTGAGAAACCTTTGTTTGAACTAGTTTGGACTGCACAAACTATTGCTCCAG ATAGTGACGGAGCCATTGATGGTCACCTTCGTGAAGTTGGATTGACGTTCCATCTCCTTAAAGATGTTCCTGGGATTGTT TCAAAAAACATTGATAAAGCACTAGTTGAGGCCTTCCAACCATTGAACATATCTGATTACAACTCAATTTTTTGGATTGC ACACCCAGGTGGCCCAGCAATTCTTGACCAAGTTGAGCAGAAGTTGGGTTTGAAACCTGAAAAGATGAAGGCCACTAGAA ATGTGCTTAGTGATTACGGTAACATGTCAAGTGCATGTGTCCTATTCATCTTAGATGAAATGAGAAAGAAGTCGGCTGAA AATGGACTTAAAACCACAGGTGAAGGACTTGAATGGGGTGTGTTGTTTGGTTTTGGACCTGGACTTACCATTGAAACGGT TGTTCTGCGCAGTGTGGCTATATAATATGTTTAATTGTTTTGTTTTTATGTAACAAACTCAATAGAGTTTGTATCTACGA GGGGGGAAAACTCATCTTGAGTTTAATCATGTATTATCAATATTAAAATAATGAATGGTTAATAGCTTTATTTATTTGTT TGAAAAATTGTTCCTTTGCAATTATGAGATAAATCTTTGTCTGCACATAAAAGATGATAAAGAATCAAAGATGCTTGCAA CTAGTTTCTT
CDS sequence (LotjaGi2g1v0449300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAGTGTAGCTGAGATTCGCAAGGCTCAAAGAGCTGAAGGCCCAGCAACCATCTTCGCTATTGGCACCGCAAATCC TCCAAACTGTGTTGATCAAAGCACATATCCTGATTTCTACTTCAGAGTCACTAACAGTGAGCACAAAACAGAGCTCAAGG AGAAATTTCAGCGCATGTGTGACAAGTCTATGATCAAGAAGAGATATATGCACTTGACTGAAGATCTTTTGAAAGAGAAC CCGAACATGTGCGCTTATATGGCACCTTCTCTGGATGCTAGGCAAGACATGGTGGTTGTAGAAGTACCTAGACTAGGCAA AGAAGCTGCTGTCAAGGCTATCAAAGAATGGGGTCAGCCTAAGTCCAAGATTACCCACTTAATCTTCTGCACCACAAGTG GTGTAGACATGCCCGGTGCTGATTACCAACTCACCAAACTCTTAGGTCTTCGCCCTTATGTGAAAAGGTACATGATGTAC CAACAAGGGTGCTTTGCAGGTGGCACGGTGCTTCGTTTGGCTAAAGACTTGGCTGAGAACAACAAAGGTGCCCGTGTCCT AGTTGTTTGTTCTGAACTTACTGCAGTTACCTTCCGTGGCCCTAGTGACACTCACCTAGACAGCCTTGTTGGGCAAGCTT TGTTCGGAGACGGAGCAGCTGCACTCATTGTTGGTTCCGATCCAGTGCCAGAAGTTGAGAAACCTTTGTTTGAGCTAGTT TGGACTGCACAAACTATTGCTCCAGATAGTGAAGGAGCCATTGATGGTCACCTTCGGGAAGTTGGATTGACCTTTCATCT CCTTAAAGATGTCCCTGGGATTGTTTCAAAGAACATTGAGAAAGCACTAATTGAGGCCTTCCAACCATTAGGCATATCTG ATTACAACTCAATTTTTTGGATTGCACACCCAGGTGGCCCAGCAATTCTTGACCAAGTTGAGCAGAAGTTGGGTTTGAAA CCTGAAAAGATGAAGGCCACTAGAAATGTGCTTAGTGATTACGGTAACATGTCAAGTGCATGTGTCCTATTCATCTTAGA TGAAATGAGAAAGAAGTCGGCTGAAAATGGACTTAAAACCACAGGTGAAGGACTTGAATGGGGTGTGTTGTTTGGTTTTG GACCTGGACTTACCATTGAAACGGTTGTTCTGCGCAGTGTGGCTATATAA
Protein sequence (LotjaGi2g1v0449300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSVAEIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSEHKTELKEKFQRMCDKSMIKKRYMHLTEDLLKEN PNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY QQGCFAGGTVLRLAKDLAENNKGARVLVVCSELTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEVEKPLFELV WTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIEKALIEAFQPLGISDYNSIFWIAHPGGPAILDQVEQKLGLK PEKMKATRNVLSDYGNMSSACVLFILDEMRKKSAENGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 235 | 235 | 9.2E-93 | ||
| SUPERFAMILY | 1 | 233 | 233 | 1.55E-80 | ||
| PANTHER | 2 | 388 | 387 | 4.5E-257 | – | |
| PIRSF | 2 | 389 | 388 | 9.9E-139 | ||
| PANTHER | 2 | 388 | 387 | 4.5E-257 | ||
| Pfam | 6 | 228 | 223 | 1.9E-121 | ||
| CDD | 16 | 384 | 369 | 4.70021E-174 | – | |
| ProSitePatterns | 156 | 172 | 17 | - | ||
| SUPERFAMILY | 235 | 386 | 152 | 1.34E-51 | ||
| Gene3D | 236 | 389 | 154 | 4.0E-56 | ||
| Pfam | 238 | 387 | 150 | 4.0E-71 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Transferase activity, transferring acyl groups | Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor). | ||
| Molecular function | Transferase activity, transferring acyl groups other than amino-acyl groups | Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi2g1v0449300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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