Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0449300 |
| Transcript ID | LotjaGi2g1v0449300.6 |
| Related isoforms 9 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P23569|CHSY_PUEML Chalcone synthase; TrEMBL-Plants: tr|I3S104|I3S104_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0449300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94297644..94303738) extracted from Lotus japonicus Gifu genome v1.2.
ATGCACTTGACTGAAGATCTTTTGAAAGAGAACCCGAACATGTGCGCTTATATGGCACCTTCTCTGGATGCTAGGCAAGA CATGGTGGTTGTAGAAGTACCTAGACTAGGCAAAGAAGCTGCTGTCAAGGCTATCAAAGAATGGGGTCAGCCTAAGTCCA AGATTACCCACTTAATCTTCTGCACCACAAGTGGTGTAGACATGCCCGGTGCTGATTACCAACTCACCAAACTCTTAGGT CTTCGCCCTTATGTGAAAAGGTACATGATGTACCAACAAGGGTGCTTTGCAGGTGGCACGGTGCTTCGTTTGGCTAAAGA CTTGGCTGAGAACAACAAAGGTGCCCGTGTCCTAGTTGTTTGTTCTGAACTTACTGCAGTTACCTTCCGTGGCCCTAGTG ACACTCACCTAGACAGCCTTGTTGGGCAAGCTTTGTTCGGAGACGGAGCAGCTGCACTCATTGTTGGTTCCGATCCAGTG CCAGAAGTTGAGAAACCTTTGTTTGAGCTAGTTTGGACTGCACAAACTATTGCTCCAGATAGTGAAGGAGCCATTGATGG TCACCTTCGGGAAGTTGGATTGACCTTTCATCTCCTTAAAGATGTCCCTGGGATTGTTTCAAAGAACATTGAGAAAGCAC TAATTGAGGCCTTCCAACCATTAGGCATATCTGATTACAACTCAATTTTTTGGATTGCACACCCAGGTGGCCCAGCAATT CTTGACCAAGTTGAGCAGAAGTTGGCCTTGAAACCTGAAAAGATGAGGGCCACTAGAGAAGTGCTAAGTGAATATGGTAA CATGTCAAGTGCATGTGTCCTTTTCATCTTAGATGAAATGAGAAAGAAATCAGCTCAAAATGGACTCAAAACCACTGGTG AAGGACTGGAATGGGGTGTGTTATTCGGTTTTGGACCTGGACTTACCATTGAAACAGTTGTTTTGCGTAGTGTGGCTATT TAATATGCTTGATTATTTGATTATTTTGTAACACTCACAAACTCACTAGATTTTGTATCTATGAGAAAGAAAATAAGCTC ATATTGAGTTTGATTATGTATGTTCAAATTAAAATAATGAATGACTAATTGCTTTTATTTGTTTGAATGAATACTTTAAA GCTAAAAGATAAGTTATCTGAGGGATTATCACTGTAATCTCATATTGGCCAGCTCTTCTAATCATTCTCTAGGTAATAAT TCTCACCCGCTTGCGTCAGTTCTCTCATATGATCAGTGTTCCCCCTGTTTATAGAAGTTTTTGGTGCTCTATTACAACTA ACATTGGGCCAAGATCTTATAAAGAGGTAGAACTATGAACAAGGTATATTAATGGAGCTTTAAGGTTTGTATGAGCAAGC CATATTAATGAATCTTTCTATGAGTTGTTCTCTCATGAAAGGTGGAATTATGAGCAAGGTATATTATGAGCAAGTTTTTG TTCCCTCCTTTAAAATTTTCAAATTACATGAATGGAGCTTTGTTTTCTGTTAGCTAGTGGTTTCAAGGATTTTTTTTGTT GCGTCAATTTAACAAACGTAGAACCAAAAGTCCTGAAGCATTGTTTTCAGATCACCAGTGTCTACTCCATGTACTCCTTC ACTTCGCTTGCAAGCTGATCAAGGGCAACCTCTTTCAGATCCTACAGCCTACAGAAGATTGGTTCACGCCTTCTTTATTT AACTACAACTCGGCCAGACATGAATTTTGCAGTTCAACAGTTGTCACAGTTTATTTTCAATCCTATGGTTTCTCATCATG AGGCAGCTCTTCGGGTTCTAAGATACATCAAGAAATCTCTTGCTTCTGGTTTATTTTTCTCTGCTTATTCTACAATTTTG CTGGCTTTGCTTATTCAGACTGGGCTTGTTTCCCTGATACAAGGAAATCTACAACAGGTTATTGTGTTTTCTTAGCTAGT CTTACTTGTGAAATACAATGGCATCCTAATGTTCTTCATGTTGATTTTTCTCCATGCTTCTATTTATTGTGATAAAAAGT GATCAGTCATATACCTTACTCATAATTCCACCTTTCATGAGAGGACAAAACACATAGAAAGTGATTAGCATATAATTCGT GAGAAGGTTCAATCTGGCTTAATTCAGTAGTTAGTGGCATGTTGGTTATTAGAGAACTTGTAGTGTGTTATATAAAGTAG TTTTATGTTTTCATTCTCTTGACTGTTGTATTGAAGTCTTCATTCTGCAATTTGAAGTCTTCACTTACATTGTGTATAAA AGCTACTCTATGAACAATTCATCATTGAGTTCAATAAATATTCAATCATTTAACTTTGTGACGGAAACTAATTCGTTACA AAATCCTAGCATAATATAAGGAAAAGGTGACGGAATGTGGGAAGAGAATTATCCGTCACAAAAAATCCGTTGCTTGAAAT TGCGACGGACATTTCCCTCTCTAAATTCCGTCGTTAAGTCTTCTCTTATTATTCACTAGAATTTTGTGACGTTTAAACTT CGTCGCAAATAATTTTCCGTCGCTAAATTATTTGCGACGGAATTTCTATATCCATATTCCGTCACTATTTCATTTAATAT CATATGCTAGGACTTTGTGACGGATTTTTCCGTCACTAAAAAAGAAAGTAAAAAAAAAAAGAGGCATCACCACTGGTGGC GTTTTATACTAATTTCGTAATTAAAAAAAATTGCACTACTTTAATAATTATTTGTATAAAGCACACTGCATGTAAAATAA CCAAATTAGAAATAAACACACACATAATATAATATTCATCATAAGATAGAAATTTCACAATAAACTTTGGTAAGCCCAAA ACGATGTAAAATAAGACAACAACATGTTCCCTAAAACTAAGCTTCAGGAATTATGTTTAGATTACTCACCAACAATCTCA ACATGCCCCCAAAATCACATTCCAAACCATCAAATTCGTTGTTTGCCATTTAATTTGCCCGAAATACTGAATGAAAAATC ACAAAATTCTATAAGTGTGAAAAATTTGCCAAACAAAAGAATCGAAACCGTGTAATTGAGTGAAACTAACCTTAATAAAA GTTAATAATGGTAATTAACTTTTTACAAAAAAAATATTATTTTAGAATAATGTATCATGGTGTATATATCATGGTATATT ATTATTATTAATTATTTTTATAATTATTTTCAAATATAGAGTGAGGGTATTTTGGTCAAGTCACATAAAATATCTCTTCT CCTCAAGTTTTCTAGCAAAACAATTTGTCTAAGCCTCAGCCTAATTTTTTTTCTCTCCGTATTTTCTTATGTACTAAGAG GAAGAAAAATTGTGTAATGTTTGTTCTCTTTGAGACATTTTCTATTCTCTTCCTATTTTCCTTTTCAAATGAAGCATTAA ATTATCAAACCAAACGATGGGATGATTTGTTTTGCATATTTTCTTTCCTTTTTCCTCTCCCTCACTAAAACCAAAGGGAG CCTAATTCTGATTAGGTCTAATGGTGGTAGGTGACCCGTGACCCCAAGCCTCCAACTGTCCAACCTTTGACCAATTCATA ATTCAGCTACTCACATCATTGAAATTTGAAACTTTAAAAAATGAGAAAGAATACTCATTCACTTGGTTACAAAGAGAAAA AGTTGTGCCTTAATTTAATTGGATGATAATTTGGTCCTGAGACTGCATGTCTGCATCTACGTCTTTTTTCTTGTATTTGC ATCAATAACATACAAATAAAATAAGGACATAAAAGGGAGTGGTTAGTGTAATAAAATAAAATAAAAATTCTCAATAATTA AATTTGTTGAAAATCCCTATCCATATAGTATAACACAACACATCAAGAATTTTGCAATACAAATATTTTAAAATTAAATC AGATAGAAAGTGATTAATTTAAGTGATACATACTTAGTTCCATTTAAACAATTTCAAATATCACGTTTGAATGTGGTGGA TGGACCACTCTACAACCACAAAAGTGAGGTGTCTATTAATGGTCGACACACAGGCAGAAAGAGCAACGTAGACGTGGCAA AGCTAATCATTGTTGTTTAGCAACTTGTCAAAACAAGAAGATATGAGGTCAATTACGAAGCACACTACCCCTAGGGCAAC AAGCGTTGGAAATTAACTCAAAACAACTTATAGATAGATTATAAGTTATTTGAATAAGTTCACTTAAATACTCACATTAA CATTTATGCTTTAAGATAAGCTATTTAAAACACTCTCATATTCCAAGTTTAACCACATAAAGACTATTTTATATTTGGGT TGTGATGCAGACGAGCTAGATCACAGTAAAAGTGTAGATACAAGTTTGAAATATGAAAAAATCATCTATTGGTAATTGGT AGAGATTGTCATCATTTTTAGAATGAGATTACTGTTGCCAAGTATAGTCGGAACACCATCAAAGATGTAAAGACTAAAAT GACGAGTTAACTTCGTAAGCTGCCGTTAGATTGAGCAGCCTAGCAAGACCTTGACTAAACTGCCATAGTCCCTGGTTTGG TGACGAAGCATTCAGCCAGCCATAGACCATATCACTATATATTATTGAACATTGAAAATGTTAGTCAGCACGTGAGCTTC AGCTACCACCCTCCAATTCCCTTTCCCCATCCACCACCTTCCCACACAACACATGGATATAAATTGCTAGTTCCCCTCAT TACTTTCCACAACCACAACTCTCTTACAGTACCAACAACAACCACTGCAACTAGAAAACTTCAGAAGAAAAGATGGTGAG TGTAGCTGAGATTCGTAAGGCCCAGAGGGCTGAAGGCCCAGCAACCATCCTGGCTATTGGCACTGCAAATCCACCAAACT GTGTCGACCAAAGCACTTATCCTGATTTCTACTTCAAAATCACCAACAGCGAACACATGACAGAGCTTAAGGAGAAGTTT CAGCGCATGTGTAAGCAATCTTTTTGTCTTTTTTAATCATCATTTATCAATTCCTAGACGTATCAGATTTGTAAAAGTTA CTCACTCTTCAATCGGTCCATTAGAGTATAGACTTCAAAGAAATATATATACTACTTCTTAACAATACAATTTGCAAGAC TAGTCATTATCAAATTGATTTTGGTGTTGTAAACTGATGTTTTTTCTTTATAATTGATTTCAGGTGACAAGTCCATGATC AAGAAGAGATACATGTACTTGAATGAAGAAATTTTGAAAGAGAACCCCAACCTTTGTGCTTATATGGCACCATCTTTGGA TGCTAGGCAGGACATGGTGGTGGTAGAGGTACCAAGGTTAGGGAAAGAAGCTGCAACAAAGGCTATAAAAGAATGGGGTC AACCAAAATCCAAGATTACCCACTTAATCTTCTGCACCACAAGTGGTGTAGACATGCCTGGTGCTGATTATCAACTCACC AAACTCTTGGGTCTTCGCCCATCTGTGAAAAGGTACATGATGTACCAACAAGGGTGCTTTGCAGGTGGCACGGTGCTTCG TTTGGCTAAAGACTTGGCTGAGAACAACAAAGGTGCACGTGTGCTAGTTGTTTGTTCTGAGATTACTGCGGTTACATTCC GTGGCCCTAATGACACTCACCTAGACAGCCTTGTGGGGCAAGCTTTGTTCGGAGACGGAGCAGCTGCGGTCATTGTTGGT TCTGATCCAGTGCCTGAAATTGAGAAACCTTTGTTTGAACTAGTTTGGACTGCACAAACTATTGCTCCAGATAGTGACGG AGCCATTGATGGTCACCTTCGTGAAGTTGGATTGACGTTCCATCTCCTTAAAGATGTTCCTGGGATTGTTTCAAAAAACA TTGATAAAGCACTAGTTGAGGCCTTCCAACCATTGAACATATCTGATTACAACTCAATTTTTTGGATTGCACACCCAGGT GGCCCAGCAATTCTTGACCAAGTTGAGCAGAAGTTGGGTTTGAAACCTGAAAAGATGAAGGCCACTAGAAATGTGCTTAG TGATTACGGTAACATGTCAAGTGCATGTGTCCTATTCATCTTAGATGAAATGAGAAAGAAGTCGGCTGAAAATGGACTTA AAACCACAGGTGAAGGACTTGAATGGGGTGTGTTGTTTGGTTTTGGACCTGGACTTACCATTGAAACGGTTGTTCTGCGC AGTGTGGCTATATAA
CDS sequence (LotjaGi2g1v0449300.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCACTTGACTGAAGATCTTTTGAAAGAGAACCCGAACATGTGCGCTTATATGGCACCTTCTCTGGATGCTAGGCAAGA CATGGTGGTTGTAGAAGTACCTAGACTAGGCAAAGAAGCTGCTGTCAAGGCTATCAAAGAATGGGGTCAGCCTAAGTCCA AGATTACCCACTTAATCTTCTGCACCACAAGTGGTGTAGACATGCCCGGTGCTGATTACCAACTCACCAAACTCTTAGGT CTTCGCCCTTATGTGAAAAGGTACATGATGTACCAACAAGGGTGCTTTGCAGGTGGCACGGTGCTTCGTTTGGCTAAAGA CTTGGCTGAGAACAACAAAGGTGCCCGTGTCCTAGTTGTTTGTTCTGAACTTACTGCAGTTACCTTCCGTGGCCCTAGTG ACACTCACCTAGACAGCCTTGTTGGGCAAGCTTTGTTCGGAGACGGAGCAGCTGCACTCATTGTTGGTTCCGATCCAGTG CCAGAAGTTGAGAAACCTTTGTTTGAGCTAGTTTGGACTGCACAAACTATTGCTCCAGATAGTGAAGGAGCCATTGATGG TCACCTTCGGGAAGTTGGATTGACCTTTCATCTCCTTAAAGATGTCCCTGGGATTGTTTCAAAGAACATTGAGAAAGCAC TAATTGAGGCCTTCCAACCATTAGGCATATCTGATTACAACTCAATTTTTTGGATTGCACACCCAGGTGGCCCAGCAATT CTTGACCAAGTTGAGCAGAAGTTGGCCTTGAAACCTGAAAAGATGAGGGCCACTAGAGAAGTGCTAAGTGAATATGGTAA CATGTCAAGTGCATGTGTCCTTTTCATCTTAGATGAAATGAGAAAGAAATCAGCTCAAAATGGACTCAAAACCACTGGTG AAGGACTGGAATGGGGTGTGTTATTCGGTTTTGGACCTGGACTTACCATTGAAACAGTTGTTTTGCGTAGTGTGGCTATT TATGTAGCTGAGATTCGTAAGGCCCAGAGGGCTGAAGGCCCAGCAACCATCCTGGCTATTGGCACTGCAAATCCACCAAA CTGTGTCGACCAAAGCACTTATCCTGATTTCTACTTCAAAATCACCAACAGCGAACACATGACAGAGCTTAAGGAGAAGT TTCAGCGTGACAAGTCCATGATCAAGAAGAGATACATGTACTTGAATGAAGAAATTTTGAAAGAGAACCCCAACCTTTGT GCTTATATGGCACCATCTTTGGATGCTAGGCAGGACATGGTGGTGGTAGAGGTACCAAGGTTAGGGAAAGAAGCTGCAAC AAAGGCTATAAAAGAATGGGGTCAACCAAAATCCAAGATTACCCACTTAATCTTCTGCACCACAAGTGGTGTAGACATGC CTGGTGCTGATTATCAACTCACCAAACTCTTGGGTCTTCGCCCATCTGTGAAAAGGTACATGATGTACCAACAAGGGTGC TTTGCAGGTGGCACGGTGCTTCGTTTGGCTAAAGACTTGGCTGAGAACAACAAAGGTGCACGTGTGCTAGTTGTTTGTTC TGAGATTACTGCGGTTACATTCCGTGGCCCTAATGACACTCACCTAGACAGCCTTGTGGGGCAAGCTTTGTTCGGAGACG GAGCAGCTGCGGTCATTGTTGGTTCTGATCCAGTGCCTGAAATTGAGAAACCTTTGTTTGAACTAGTTTGGACTGCACAA ACTATTGCTCCAGATAGTGACGGAGCCATTGATGGTCACCTTCGTGAAGTTGGATTGACGTTCCATCTCCTTAAAGATGT TCCTGGGATTGTTTCAAAAAACATTGATAAAGCACTAGTTGAGGCCTTCCAACCATTGAACATATCTGATTACAACTCAA TTTTTTGGATTGCACACCCAGGTGGCCCAGCAATTCTTGACCAAGTTGAGCAGAAGTTGGGTTTGAAACCTGAAAAGATG AAGGCCACTAGAAATGTGCTTAGTGATTACGGTAACATGTCAAGTGCATGTGTCCTATTCATCTTAGATGAAATGAGAAA GAAGTCGGCTGAAAATGGACTTAAAACCACAGGTGAAGGACTTGAATGGGGTGTGTTGTTTGGTTTTGGACCTGGACTTA CCATTGAAACGGTTGTTCTGCGCAGTGTGGCTATATAA
Protein sequence (LotjaGi2g1v0449300.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHLTEDLLKENPNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLG LRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSELTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPV PEVEKPLFELVWTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIEKALIEAFQPLGISDYNSIFWIAHPGGPAI LDQVEQKLALKPEKMRATREVLSEYGNMSSACVLFILDEMRKKSAQNGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI YVAEIRKAQRAEGPATILAIGTANPPNCVDQSTYPDFYFKITNSEHMTELKEKFQRDKSMIKKRYMYLNEEILKENPNLC AYMAPSLDARQDMVVVEVPRLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGC FAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTHLDSLVGQALFGDGAAAVIVGSDPVPEIEKPLFELVWTAQ TIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKM KATRNVLSDYGNMSSACVLFILDEMRKKSAENGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 319 | 319 | 0.0 | – | |
| Gene3D | 1 | 166 | 166 | 4.4E-59 | ||
| PANTHER | 1 | 319 | 319 | 0.0 | ||
| Pfam | 1 | 159 | 159 | 2.1E-86 | ||
| SUPERFAMILY | 2 | 164 | 163 | 2.11E-56 | ||
| CDD | 5 | 315 | 311 | 1.88225E-140 | – | |
| ProSitePatterns | 87 | 103 | 17 | - | ||
| SUPERFAMILY | 166 | 318 | 153 | 6.08E-51 | ||
| Gene3D | 167 | 317 | 151 | 6.2E-56 | ||
| Pfam | 169 | 318 | 150 | 1.9E-70 | ||
| Gene3D | 318 | 551 | 234 | 7.7E-89 | ||
| PANTHER | 320 | 704 | 385 | 0.0 | – | |
| PANTHER | 320 | 704 | 385 | 0.0 | ||
| SUPERFAMILY | 321 | 549 | 229 | 1.64E-76 | ||
| Pfam | 324 | 544 | 221 | 1.1E-117 | ||
| CDD | 334 | 700 | 367 | 3.7106E-165 | – | |
| ProSitePatterns | 472 | 488 | 17 | - | ||
| SUPERFAMILY | 551 | 702 | 152 | 9.6E-51 | ||
| Gene3D | 552 | 705 | 154 | 1.1E-54 | ||
| Pfam | 554 | 703 | 150 | 7.9E-69 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Transferase activity, transferring acyl groups | Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor). | ||
| Molecular function | Transferase activity, transferring acyl groups other than amino-acyl groups | Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi2g1v0449300.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…