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LotjaGi2g1v0449400.3

Overview

Field Value
Gene ID LotjaGi2g1v0449400
Transcript ID LotjaGi2g1v0449400.3
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Chalcone synthase; TAIR: AT5G13930.1 Chalcone and stilbene synthase family protein; Swiss-Prot: sp|P30075|CHS4_MEDSA Chalcone synthase 4; TrEMBL-Plants: tr|I3T7A9|I3T7A9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0449400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:94312610..94319851) extracted from Lotus japonicus Gifu genome v1.2.

ACTCAAGTTTCCACACCACAACCGAACAACAACTCCTACTGCAACTAAGTGCCAATTCAGCTCAATTTCCACTGCTTCTT CATTCGCTTCTTGCTTACAAACTTGATATCATCAACGACAAAGGATTTTAAGATGGTGAGTGTAGCTGACATTCGCAAGG CTCAAAGAGCTGAAGGCCCTGCAACCATCTTCGCTATTGGCACTGCAAACCCTCCCAACTGTGTTGATCAAAGCACTTAC CCTGATTTCTACTTCAGGGTCACTAACAGTCAGCACAAAACTGAGCTCAAGGAGAAGTTTCAGCGCATTTGTAAGCATTC TGCATTTTTCTCTCTAGCTCCATTTTTTCTATATTACATTCATTTACATTGCTAGACAGACTAGTCATTATCAGATTGAT TTTATTGTACTAATGTTGTTTCTCTATAATTGATTTCAGGTGACAAGTCTATGATCAAGAAGAGATACATGCACTTAACT GAAGATCTTTTGAAAGAGAACCCCAACATGTGCGCTTATATGGCACCTTCTCTGGATGCTAGGCAAGACATGGTGGTTGT AGAGGTACCTAGACTAGGCAAAGAAGCTGCTGTCAAGGCTATCAAAGAATGGGGTCAGCCCAAGTCCAAGATTACCCACT TAATCTTTTGCACTACAAGTGGTGTGGACATGCCCGGTGCTGATTATCAACTCACCAAACTCTTAGGTCTTCGCCCTTAT GTGAAAAGGTACATGATGTACCAACAAGGGTGCTTTGCAGGTGGCACGGTGCTTCGTTTGGCTAAAGACTTGGCTGAGAA CAACAAAGGTGCTCGTGTCCTAGTTGTTTGTTCTGAACTCACTGCAGTTACCTTTCGTGGCCCTAGTGACACTCACCTAG ACAGCCTTGTTGGGCAAGCATTGTTTGGAGATGGAGCAGCTGCACTCATTGTTGGTTCCGATCCAGTGCCTGAAATTGAG AAACCTTTGTTCGAGCTAGTATGGACTGCGCAAACTATTGCTCCAGATAGGGAAGGAGCCATTGATGGTCATCTCCGTGA AGTTGGATTGACCTTTCATCTCCTTAAAGATGTTCCCGGGATTGTTTCAAAGAACATTGAGAAAGCACTAATCGAGGCCT TCCAACCGCTAAGCATATCTGATTACAACTCAATATTTTGGATTGCACACCCAGGCGGCCCAGCAATTCTTGACCAGGTT GAACAGAAGTTGGCCTTGAAACCTGAAAAGATGAGGGCCACTAGAGAAGTGCTAAGTGAATATGGTAACATGTCTAGTGC ATGTGTCCTATTCATCCTAGATGAAATGAGAAAGAAATCAGCTCAAGGTGGACTCAACACCACGGGTGAAGGACTCGAAT GGGGTGTGTTATTCGGTTTTGGACCCGGACTTACCATTGAAACTGTTGTTTTGCGTAGTGTGGCCATATAAAATGCTTGA TTATTTTATTATTTTGTAACACTCACGAAGTCACTAGATTTTGTATATGCGAGGAAGAAACTAAACTCATTGAGTTTTAT TTTGTATGTTCAAATTAAATAATGAATGGCTAATCGCTTTTTTTCATCTGTTTCAAAAATGAATATATGTTTATGTATAT ATGTTGAATGGCTATGGAAACATGTTTGACATGTTGACTATTTTTCACACCCTTCAGTATCACAGTTAGCATGTTAGGTT GCTGGTCTTAGACTTATTCAATAGTTATCCATAAAGGCGCGCTCCTATAGCACCAAGAGGCACTAACCCCTTTTAACTCC TTGCCTCAGCAACTTTGGTGCCTCTTAGTCTTGCAGAGATACGAATACAGTCATTCCATAATACCTCTTACTCATGATTG GAACACACTATAAGTAGTATGATATTTGTTACTGGTTTTTACCAGTATAAAAGGAAATAGGAGTTGAAATTTTGCTTGTT GTCAATCTAAGTACATAGATTCCATGGTTTACAACACATCTTTATGTTTAAACAGAAATATACTGCACTATTTTTGTTTT AAGAAAATTACAAGTTCTTCCTTCTGTGCTTGCCTGAAATGTATATTGTGTTAGAAGTCCCACATTGGCTAGAGATAAGG TCAATCAAGTGTTTATAAAGGGTTGTGCAAACCTCAACTCTTGAGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTT CTAATATGGTATCAGAGCCTATCCTAGATCCATTTGTTGTGTGGAGACCTCCCATATTTGGGCCACTCGTTGTTGTTTCC ACGTTCCAGTCTGTTCAATCCTGGACATGAGGGGGTGTGTTAGAAGTCCCACATTGGCTAGAGATAAGGCCAATCAAGTG TTTATAAAGGGTTGTGCAAACCTCAACTCTTGAGCTAGCTTTTGTGGTTGAGTATAGGTCTCCCAATTTCTAATATATTG CATCCTGATTTCCCTGCAGGACATGTTGACCAAAGGCCATTTGATACTTTCTTACTTCAATCAAATGAACCTAAACCTAG CATAAAGCAAAATCCTTCACCAGGGAGACCTTCCAATGGAGGTGTAGAGGTATTGAAAAATAGGCAGTTGTAGCAGATGA TTTACACACTACTGTTGAGCCTATAATTGGCCCTGGTGCTCCAGGAACTAATGTAACATCCTCCAGCAGGAGTCCTTTAG AAAAATCGGAATCTAGCTCAGAGAATGATTTACTAACTGTCAACTGTGATGCTCCTTGTACTGCAACAAGCAGAGTTTTT GTTAATGAGATTAAAAACAAATCTCAGGACAGTAAAATCATGCTACTATTTGATAAAATTCTTCTAGTTATGCAATCTCC ATGTAATAGCAGAATTCATATGTCAAGAAACAAGGGCAAGGAAAAGTCCTTATCAGACGGTGATTCGAATGGAGGAGAGT GACAGCCAGTTAAGTGTTGAAAGCTGTAACAGTACTGAGTTTTCCCCCAAGGTAAGAAGAGACCTGACTTTCAACGACAG TTGATGGTTGGGAGTAAAAAAGCGACGAAAAAGCTTCATGAAGAAGGAGAGGGAAGTGAGGATTTAGAGCCATGTAACAT GGTACAGGGAATAGATACTACTCCAATATCATGTTGTGCAGATTATCCCAAGCATTGAAAGGGGTGCAAGGTTGCTGAGT GGTGAGGCTGGCCGAATTTTATCCGGTGATCAATGATGGAAGTGATCACCAAGCAGATCAGAATATTACTTTGAAGCGGA AATTAAATGAAAATACAACCTTCAAGATAGGTTTCTATGCATCATTCAAGAAACAATGCAGTTCAAGTTCAGGGGAAATA AATTCAAAGAAAATCCAATCCAATAAAATCTCCATCCAGATTCACTGAACGACAGATGTCACACGTGACAAAGGGAATCT TTGATGCATTGAAAAAGCTCCAATTTTCCTGCACTGACATCCTGAAGTAAGTAATGCTAGGCAACCGATACTATGTTATT TCATGTAAAGTGGATTGGAGTATGCTTGCCATCTCATTTGATGATACATGCTGAGGTAAGTCATTAAAGAAATTGTTAAG TGGATTTGTGATGTTTTTGAGGAGGTATTGTTGCAGATGAAAGTCTAGTGTTGACATAAATTACAATATTGATTTGATGT AGATCACTAATCAGGACACTTTTTAATTCTCACTTTGCAATTTAGGTTGGTTTGAATTATGAGAGTCTGTGGTTGTAAGG GTAATTAGCTGCCTTAATGATTGTGCTAGACCATACACGGGTGATGCTTGGATTGGTTTATGATGCCCCCCCCCCCCCCA AATAACTATCAGGTTTGTTTATCAATGCCTGAACCTACTTATAGGAAGTAGAAACCTCCAAGAGCCTATCATAATGTATT TTTCCCTTCTAATACAGATTTAGCTCGGAGGAAGCAAGAGTCAAACTTCTGATAAATCTTCAAAACAAGAGTGCTCATCA ATTTTTGATATTTGAGTACTCCAGTTTTCATTTTTTCATACATGTTTTTCTACTGTGTGTGTCAGTTTAGTTTATCTTTC TAATAAACTAAGTAGGTGATTACAGCAACACCAAGGCAGATTGAGTCTGAAGTGTTGGCTCGGATCCACTTTCTCAGAAT GGGTTAGTTAACCTTTGCTTAGTTTCTTCAAATTGAAAGCTTAGATTTTACTGTTAACTGCCCGGGCTGAAGTTACTTCT TGATTAAACTTGCATGAGATCAGAAACTTGATTTACAAGCATATCATTTGGTTCACCTCTATTGCTGGAGATTTACAAGT AGCGCCATTTACTTTATACTTTATGTTCTCCCATAGGCTAAGCCTCATCATGGTTCTTAATTTCCTATAATTGGTTTCTT AGAAAGTCAAACTGACTTTTCCTCTAGTTTCTCCAGTTTCCCTGGTTATTTTGGTCTCCTTCTGTAGTTCTTATTTTTCA AACTATATAATAAAAATCAAGTGTGCTGGTTGTAAGTTTATTCAGGAGTTATTAGGGGAAGGTTTTTGCTTGGAAAGTGG AGAGTACAATGTGCTGGGTTTTAATTTTCAGAAAAATCTTGTTTTCTACTTCCAAAAGCCAAGTTTTTGTGTATACTAAC TATGAATGTTTGTACAAGATCATAAGAGCTATCTGTCATTAGTCTTTTTCGAGTTCGAAAGACAATGTATGAATAAGACC ACATAAAAAATTAAGAATTGTCACTTAGTGGTGGACAACTTCAGATTGGGGAACTCTGACATTGGCAGTAAAGTTTGAAG CTTTTGGAAAATATGTGGCAGCTTAGAATCGCTAGTAAGTGAGGCAGGCTGTAGCAGGGGTTGGTCAAAAACCACTAGAA ACCAAGTTATGGCACATGTGGTTTTTGGATCCTCTCCATCCAGCTTTTCTCCATTTTCTCTCCATCCAAAATCTGAACCT TTGATTTTGAATTTTAAAGGTGAGGATTAGTTCATGTTTTCTCTCTCTTCTTAAATTGATTCAAGCCTTTAAATACAATT CATTTTTTCTCTCTCTTCTTAAATTGATCCAAGCCTTTAAATTTCCAAATCAATTGCTCAGATTTGGATGGAGAGAGGCT GGATGGAGAGGATCCAAATCCGTTTTTGCATCATAACCAGCCTCTGGTAATTTTTTTTTGTTGGAAATGATTTTCCCACA TACGCCTCTCAGCGACCAAAGAGCGACACACATTTTTCTGGCAATTCTTGAAGGCGGCAAAACTGCCACAAAATTACTTG TTTATTTTGCTGGGGTTTCAAAATCCTTGCTAAACACTTTTGTTTCTTAACAAAAATTTTCTGGCTGTTTGTGAACACTG CACTTACCGCCATAAAATTGTGTTTTTATAACGTTACAAAAATTAGGGCTTTCCTAATAACCACTACGAAACGAAACTCG ATCCACCTAATAAAACTACGACTCATACAGATCAAACGAAACTCGATCCAATTGAATTTACCAAAATAATTAAATTCAAA TTTAAAGATATTCAAAATAGAAAAAAAAGTACTGAGATAGTTTATTGTTTTAGTGAATGATGGAAATTTCAAAAAAAGTG AATGATGAAACGTGGGTGGGTCTTATTTCTTAAGACGAAATTGAAAGCCATCCTCGGGTAATTTCCACCTAACTCCGCAA TCACAAGGTCATAGACTGCGCACGCCAGCCATTGACCAGACAAGGAAACAAAGAAATCGTGGAATCAAAATGTTCGTGAA CTTCAGCTACCACAACACTCACACTCCAATCCACCTTCACATATAAATTCATATCTCCCCCACTCAAACTTTCCACACCA CAACCTTCTCTAACACCAAATTGTAAATTGCATTGCTTCTTCATTTATATCTTTCCCAACAAACTTCATTTCAAAGATAG TGAGTGTAGCTGAGATTCGTAAGGCTCAGAGGGCTGAAGGCCCAGCCACCATCTTCGCTATTGGCACTGCAAACCCTCCC AACTGTGTTGATCAAAGCACTTACCCTGACTTCTACTTTAGAGTCACCAACAGTGAGCACAAAACTGAGCTCAAGGAGAA GTTTCAGCGCATGTGTAAGCATTCTACATTCTCCTCTCTAGCTCCATTTTTTTTCTATATAACATTCATTTACATTGCTA GACTAGTAGTCATTATAAGATTGATTCTGGTATTTTCTTGAGATTACTGTACTAATGTTGTTTCTTTATAATTGATTTCA GGTGACAAGTCTATGATCAAGAAGAGATATATGCACTTGACAGAAGATCTTTTAAAAGAGAACCCTGACATGTGCGCTTA TATGGCACCTTCTCTGGATGCTAGGCAAGACATGGTGGTTGTAGAAGTACCTAGACTAGGCAAAGAAGCTGCTGTCAAGG CTATCAAAGAATGGGGTCAGCCCAAGTCCAAGATTACCCACTTAATCTTTTGCACTACAAGTGGTGTGGACATGCCCGGT GCTGATTATCAACTCACCAAACTCTTAGGTCTTCGGCCTTATGTGAAAAGGTACATGATGTACCAACAAGGGTGCTTTGC AGGTGGCACGGTGCTTCGTTTGGCTAAAGACTTGGCTGAGAACAACAAAGGTGCTCGTGTGCTAGTTGTTTGTTCTGAAC TTACTGCAGTTACCTTTCGTGGCCCTAATGACACTCACCTAGACAGCCTTGTTGGGCAAGCTTTGTTCGGAGACGGAGCA GCTGCACTCATTGTTGGTTCCGATCCGGTGCCTGAAATTGAGAAACCTTTGTTTGAAATGGTTTGGACTGCACAAACTAT TGCTCCAGATAGTGAAGGAGCCATTGATGGTCACCTTCGTGAAGTTGGATTGACATTTCATCTCCTTAAAGATGTTCCTG GGATTGTTTCAAAGAACATTGAGAAAGCACTAATTAAGGCCTTCCAACCATTAGGCATATCTGATTACAACTCAATTTTT TGGATTGCACACCGAGGTGGCCCAGCAATTCTTGACCAAGTTGAGCAGAAGTTGGCCTTGAAACCTGAAAAGATGAGGGC CACTAGAGAAGTGCTAAGTGAATATGGTAACATGTCAAGTGCATGTGTCCTATTCATCCTAGATGAAATGAGAAAGAAAT CAGCCCAAGATGGACTCAAAACCACCGGTGAAGGACTTGAGTGGGGTGTGTTATTCGGTTTTGGACCTGGACTTACCATT GAAACGGTTGTTTTGCGTAGTGTGGCTATATGATGTGCTTGTTTGTTTTATTATTATGTAACTGTACAAACTCATTAGAT TTTGCATCTATGAGAAAGAAAATAAACTCATTTTGAGTTTGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0449400.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTGAGTGTAGCTGACATTCGCAAGGCTCAAAGAGCTGAAGGCCCTGCAACCATCTTCGCTATTGGCACTGCAAACCC TCCCAACTGTGTTGATCAAAGCACTTACCCTGATTTCTACTTCAGGGTCACTAACAGTCAGCACAAAACTGAGCTCAAGG AGAAGTTTCAGCGCATTTGTGACAAGTCTATGATCAAGAAGAGATACATGCACTTAACTGAAGATCTTTTGAAAGAGAAC CCCAACATGTGCGCTTATATGGCACCTTCTCTGGATGCTAGGCAAGACATGGTGGTTGTAGAGGTACCTAGACTAGGCAA AGAAGCTGCTGTCAAGGCTATCAAAGAATGGGGTCAGCCCAAGTCCAAGATTACCCACTTAATCTTTTGCACTACAAGTG GTGTGGACATGCCCGGTGCTGATTATCAACTCACCAAACTCTTAGGTCTTCGGCCTTATGTGAAAAGGTACATGATGTAC CAACAAGGGTGCTTTGCAGGTGGCACGGTGCTTCGTTTGGCTAAAGACTTGGCTGAGAACAACAAAGGTGCTCGTGTGCT AGTTGTTTGTTCTGAACTTACTGCAGTTACCTTTCGTGGCCCTAATGACACTCACCTAGACAGCCTTGTTGGGCAAGCTT TGTTCGGAGACGGAGCAGCTGCACTCATTGTTGGTTCCGATCCGGTGCCTGAAATTGAGAAACCTTTGTTTGAAATGGTT TGGACTGCACAAACTATTGCTCCAGATAGTGAAGGAGCCATTGATGGTCACCTTCGTGAAGTTGGATTGACATTTCATCT CCTTAAAGATGTTCCTGGGATTGTTTCAAAGAACATTGAGAAAGCACTAATTAAGGCCTTCCAACCATTAGGCATATCTG ATTACAACTCAATTTTTTGGATTGCACACCGAGGTGGCCCAGCAATTCTTGACCAAGTTGAGCAGAAGTTGGCCTTGAAA CCTGAAAAGATGAGGGCCACTAGAGAAGTGCTAAGTGAATATGGTAACATGTCAAGTGCATGTGTCCTATTCATCCTAGA TGAAATGAGAAAGAAATCAGCCCAAGATGGACTCAAAACCACCGGTGAAGGACTTGAGTGGGGTGTGTTATTCGGTTTTG GACCTGGACTTACCATTGAAACGGTTGTTTTGCGTAGTGTGGCTATATGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0449400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVSVADIRKAQRAEGPATIFAIGTANPPNCVDQSTYPDFYFRVTNSQHKTELKEKFQRICDKSMIKKRYMHLTEDLLKEN PNMCAYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY QQGCFAGGTVLRLAKDLAENNKGARVLVVCSELTAVTFRGPNDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPLFEMV WTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIEKALIKAFQPLGISDYNSIFWIAHRGGPAILDQVEQKLALK PEKMRATREVLSEYGNMSSACVLFILDEMRKKSAQDGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.47.10
1 235 235 1.6E-92
IPR016039
SUPERFAMILY
SSF53901
1 233 233 1.05E-80
IPR016039
PANTHER
PTHR11877:SF62
2 388 387 9.9E-257 –
PIRSF
PIRSF000451
2 389 388 4.7E-137
IPR011141
PANTHER
PTHR11877
2 388 387 9.9E-257
IPR011141
Pfam
PF00195
6 228 223 1.9E-120
IPR001099
CDD
cd00831
16 384 369 7.03976E-172 –
ProSitePatterns
PS00441
156 172 17 -
IPR018088
SUPERFAMILY
SSF53901
235 386 152 6.33E-50
IPR016039
Gene3D
G3DSA:3.40.47.10
236 389 154 1.9E-55
IPR016039
Pfam
PF02797
238 387 150 1.1E-69
IPR012328

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0009058
Biological process Biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Subterm of
GO:0016746
Molecular function Transferase activity, transferring acyl groups Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
Subterm of
GO:0016747
Molecular function Transferase activity, transferring acyl groups other than amino-acyl groups Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0449400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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