Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi2g1v0455300 |
Transcript ID | LotjaGi2g1v0455300.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Cysteine synthase; TAIR: AT4G14880.1 O-acetylserine (thiol) lyase (OAS-TL) isoform A1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|Q8W1A0|Q8W1A0_SOYBN Cysteine synthase; Found in the gene: LotjaGi2g1v0455300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94838209..94846987) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGCTTGAAAGGTCTGGAATCGCTGAAGATGTTACACAAGTCAGTTTCTGTACCTTAACACCCATTTCTATATGATT TTTCTTACTCTGTTGTTAGTCAGTCATAGTGTTCATTGGTAGATTCTATAATGTTGTCATATTTGTTCTCTGTAGTTGAT TGGCAAAACCCCATTAGTATATCTAAATAAACTTGCTGATGGTTGTGTTGCCCGAGTCGCCGCCAAGCTGGAATTGATGG AGCCATGCTCTAGTGTAAAGGACAGGTAGGTACCTATTTTTTGATTCTCAATTTTTGTTCATGCGTTTCGTAGGTTATGT TCTGCCTTGTTCTTTTGTTCTTATGGTTTAAATTTGACATGCAGGATTGGCTATAGTATGATTGCTGATGCAGAAGAGAA GGGACTTATCACACCTGGAAAGGTTGGTATACGTTGTTTCGGATGTTAGTAGTTAACTAGTTATCATGATTAACTTGTTT GTATGAATGTGCGTGAATCCTGAAATACTAGTTAATTAAAATATTCCATGTAATAGATATTCAGGAGCAGGATAACTAGT TAAATCATATGCACATGCGGGAACATCCTATATGGGAGGTTTGGCCCAAATTTAAATAAAACGTCAAGTTCTGCTATAAA ATAATTACATGACGGTGTTACTCTCCTTGCAGTTACTTTAGATTTTAGACCTTAATGGATACACTGTTAATTGACTGCTG ATATGTATAATAATTTGAAGTGGTAAGGAGAAGAAAGTAGATCTGCTTCTTTAGTGTATATCTCAGCTGACAATTATACT TTTTTCTGCATGTGTGTTTCTCATGTGTTCTACAGAGTGTTCTCATTGAACCAACTAGCGGTAATACTGGAATTGGATTA GCCTTCATGGCAGCAGCTAAGGGTTACAAGCTCATAATTACGATGCCTGCTTCAATGAGTCTTGAAAGAAGAACCATTCT ATTAGCTTTTGGAGCTGAGTTGGTTCTTACTGACCCTGCAAAAGGAATGAAAGGAGCTGTTCAGAAAGCTGAAGAGATAG TGGCTAAGACTCCTAACTCCTACATGCTTCAGCAATTTGAAAACGCTGCCAATCCCAAGGTATATAAGCAAATTAATCAT GTAACTAGTGTAATGGATTCTTGACACTTGCGCAATATACATATTGTTATCATTGCAGGTACACTATGAAACCACTGGTC CAGAGATATGGAAAGGCACAGCTGGTAAAGTTGATGCACTTGTTTCTGGGGTAGGTACTGGTGGTACCATAACAGGTGCC GGGAAATATCTTAAAGAGCAGAATTCCAATATAAAGGTTAGCTTTTTGCTTCCTAAATATATGCTTATATAAATTTATCG CTACTTAACAAGAATTTTCCTGAAAATAAAGATAACCTATTTCCACTATAGCTATGTCATTCTTTCTATATGTTCTCAGT GTCTTTTCCCATTATGCAGATGATTGCTGTGGAACCAGTTGAAAGTCCAGTGCTCTCAGGAGGAAAGCCTGGTGAGTTAT GACCTCTTCAGTGATAATGTTGTTCTTCAGTAATTTTCCATTGAGCTGTAAAATTCTTACAGTAGAAGCTGATATTTTAT TTTATTTTATTTTCTATCAATCTGTTTCTCGGTGTCTGAGAGCTTTAAGGATGAAGGGAAGATAGTCTAATTAAAAGGGG TAGAGGAAGACTTAAAAAAACTACAGCAGAAACCAGTTGAAGTAGGAAAAAGAAAAACATATCTTCTTGGTTTTACTGGA ATTTTGGTTTTTGATAGAAACACCATCAACTCTTAGTGAAGCTGACTCTACCCAATGGGTTAAAGCATGCTCATTTTCCA TGTTAAAGCTATTGGCTGGCATTAGACCAATGATTGCATTGGAGCCTTGGAGGTATTATTAAATAATACCCAAACCCACT TCCTTCTTACCGTCCAGGAAGGACCAGGTTTTGTCTACCTGTCCATGTTACTAAAAGTAGATTATCACTAGGTTTTCTTT ACAATGAAGCATTCGTTGTATCTTTTCTTGTGAATTTTTTTCGATACCATTTCATGACTAATCTTATACAAAACATGTAA AGCCTGTCACTGAGATTATGCTGTTTTTTGTTCTGCTTAAAATCATCCCTTCAGAGGGTAGTAGACTATATATTAGTTCC TAATTCCTATTTGCTTTTCTTGTTTGTTTTGTTCTCCGGTGGCTGCATGCCTGCAACTAATATAATGTTAACACTTAAGA ATAAAACCTTAAGGTTGAGATGAAGAACTTTCTTTTCCAAGCTGTAGCTAATTTGCAAATTACCTTGTGAATGTCCAGGT CCACACAAGATTCAAGGGATTGGTGCTGGTTTTGTCCCTGGTGTCTTGGATGTCAATCTTCTGGATGAAGTCATTCAAGT AAGCTCTAACAACTTTATGATTTATGATAAAAAAAAAAATTGAAGGTGTTCGGAATGTGCTGTGGAGTTATATATGTGTG TTTATAGTTATTGCATCTGATTGTTGATAGTTGCTTGACATTCTTGCGCCTTCAATACTTCAATATGGATTTGATCTGGC AGTATACTGTCCTATAAATTTGATAACATTAGTACATTTTTAACTTTGACTTAATATCTCATAATTTTGCAACTTTGAAA GTTGCAACGGTTTATGTTTCATTAAACCTGAGATGTGTCTTTTGCAGATATCAAGTGATGAAGCTATAGAAACTGCGAAG CTTCTTGCACTTAAAGAAGGCCTATTCGTAAGTTCTAAACTTATTGAAACAGCCAAGATCGTGCATGATGTTGCCTCTAA CACCTATTTTGTATTATTGCAATTGATATTTGAATTGGATATGGGAACAAATAAGAAAGAACCTAGTAATACCATTTTTT TTTCTAATTGTGTAGTTTATTGATCATGTTTACTCTGGATATTATTGCAGGTGGGAATATCTTCAGGAGCTGCAGCTGCC GCTGCCATTAAGATAGCAAAAAGACCAGAAAATGCTGGAAAACTTATCGTTGTAAGTTAATTGTATCCCTAGATCTACAA AAACTACATTGTATTACAGAGTACAAGTTAAATCAAGGATCATTGAAGACTGATCCTTTATTTTTTATTTTAATATAACA CATTTTGATAAATTGGTGATTACATTCCTCCATATTATTAGTTCCGGTACTCGTACCAACACCATTAACATGTAATATCA AAAAACTGCATTAACACATGATATCAAAGAAATGCATTAACATGTGATATCAAAGAAATGCTGCAGGTAGTATATTAGAG TATACTACTCGTGTTAAGTAAAGCTACTGATTGTAGCTGAGTTAGTGTGTTAGTTATGCTTGCTTAGCTGTCAAGCTTAG CTGGCATAACAGAATTAAGAGTTAGTTGTTAGAGTTTGTTAGAATTGTTAGCTTGTTCATCAAGCTTTATATTCTTCTAT AAGTACTGAACTATGGTCTATTGTATCATAACCTTTGAAATGAATGAGAATTAGATTTACAGAGTTCTGAGTTTTCAACA TGGTATCAAGAGCAGGTCACGATCCTTGAGATCTCTCTCGATTTTCTTTTCTTCTCCTTCTTCTTCGTCATGGCTGACGA AATTCCAGAGATTCCGATCCCGATTCCAGTTCCAGTGGCTCAACCGCAGTTGAGTTCATCCACGCTTGTTCACAAGCTTA CGTTGAAGCTTGATGATACAAATTTTCTTTCATGGAAGCAGCATGTGGAAGGGATCGTTCGCACTCACAGGTTGCAGAGT TTCCTTTCTCATCCTGAGATTCCACCACGATTTCTCACTGAAGAAGATCGTGTGAATGCAGTGGAGAATCCTGCATATCA AGTCTGGGAGCAGCAAGATTCTGCTCTGTTTACGTGGTTACTTTCTTCGCTTTCACCATCAGTGCTTCCTACTGTGGTGA ATTGCTCTCAGTCCTGGCAAGTCTGGGAAGCAGTGCTCGAATTCTTCCACGCACACGCTCTCGCGCAGTCCACACAACTG AGATCTGAGATTCGATCCATCTCCAAGGGATCGAAGTCGTGTTCTGAGTATCTCAAGCGTATTAAGTCGATTGTTAATGC GCTAATCACGATTGGAGATCCAATCTCCTATCGTGAACACTTGGAAGCAGTGTTTGATGGCTTGCCTGAGGAATACAGTC ATCTTCAAACGATTGTGTACAATCGTGAATCACCGAGTTCGATTTCGCAGGTTGAAGCGATGATTATCGCACATGAAGCG CGTCTCGATCACGCTCGTACTCGCCAGATCTCGACAAATCCTCCGTCGGCGCTCCTTACTCAGGCTCCACCGCCACCAGC GACTCAACCTCCGCTGTCGACACCGTCGCCGGTGGCCTCTGAAGCAAATTATGCTTCTGGATCTGTCGATTCTTCCTATA AGGATCGTTCTTATGATGATCGCAGTGATGATCGCACTGGATCCTATGAATCGCGTGGACGTGGTGGCTACACTAGCAAC AATGGTGGAAACAACTCTCGTGGTGGCTACAATGGCCGTGGAGGAGGTAGAGGTAATAATCGCAGCGTTCAGTGTCAGAT TTGTAAGAAGTATGGACATGATGCTACTGTTTGTTACTATCGTGGTTCTTCATCTTCATCCACTCCTTCTTCTGGCATTT CTGGAATGAACTCAGGCTATGGAATGCAATTTCCTAATTTTCCTATGATGCCTATGCCTCAGTTTGGCTTCTCACCTTAC TGTGGATCTCCTCAGTTTGGTTTTCCCACTCAGTTTGGTCAGCAACAACAGTTTGGTCATGGAAATTCATTCTCTGGTTT TCCTTTTGGTCCTCAACAGTTTGGATTTAGTTCCTTTGCTGGTACTCCATGGAGTAATTTTCCTTCTCAGTTCAACAATG GAGGACAGAGGCCTGGAAATTCCATTGCAAGGCCTCCACAAGCTATGCTTACTGGCACATCACAGGCTGGAGGATCTGCT TCAGCAAACCTGAGCACTTGGTTCCCTGATTCTGGTGCTACTCACCATGTGACAAATGACTCCTCAGTCATCTCAGATAG TGTCTCCCTCACTGGTAATGACCACATCTTCATGGGGAATGGACAAGGTTTGCCAATCCTCTCTATAGGATCTGCTTCTT TTCCTTCTCCTTATCATAATACAACCACACTCACTCTTAAAAATCTGCTTCTAGTTCCCAATATCACCAAGAATTTGGTT AGTGTAAGTAAGTTTGCAAGGGACAATCATGTTTATTTTGAATTTCACCCTTCTTTCTGTGTTGTTAAATGTCAGGTCAC ATCTAGAGTTCTTCTTCAAGGTCATGTTGGACCAGATGGCTTGTATGTCTTTGAAGGCATGCATACTCCTTCCCTTTCCA AGACATCTCCTATTCCAGCTTCTGCTTCTTTGTCTCCAGTGGCTGTTTCAGACTCAGTTTCTGCTTTGTCAGCTGCATTA TCTAGCTCTACTACACCTAGTCTTAGTCCTAAGTCTATAGTTTCATCTTCTGCTATTGTAAGCCCAACCTCTTATGGTTT GTGGCATTCTAGATTAGGTCATCCTCATCATGAGGCTTTGCATTTAGCTTTAACCTCTTGTAATATTCAAGTTCCTAATA AAACAAAGTTCAATGTTCGTTCAGCTTGTTGTCTTTCTAAGTCTCATCGCTTGCCATCTCATTCTTCTACTACTGTTTAC TCCTCTCCTCTAGAGCTAATTTTTGCTGATTTATGGGGGCCCTCCTCTATTGAGTCTTCTTGTGGTTTTTCTTATTTTCT TACTTGTGTGGATGCCTTTTCTCGTTTCACATGGATCTTTCCTATGAGAAAGAAATCTGATACTTGTTCCACATTTCTAC AGTTTCAAGCTATGGTAGAATTGAAATTTAGCAAGAAACTTAAGTCTATTCAAACTGACAATGGCACAGAGTTTAAACCC CTTACTTCCTATTTTACAAAGTCAGGGATTGTTCATAGGTTGACATGTCCCTATACACATCACCAAAATGGTAGTGTGGA GAGGAAACATCGCCATATTGTTGAAACTGGCCTTTCCTTGCTAGCACATGCTCATTTGCCATATCAATTTTGGGATCAAG CTTTTCTTGCAGCTGTGTTTCTCATTAACAGATTGCCTACCTCTGTTTTAGGCAATGCAAGTCCTTACCTTAAGCTTTTT AATACACAACCTGATTACAAGCTACTTAGAGTTTTTGGCTGTGCTTGTTACCCACATTTGAGGCCTTACACACAATCCAA GTTGTCTCTGAGGTCTAAGCTTTGTGTGTTCATGGGCTATTCATCACAACATCAAGGTTATAAGTGTATGGACAATGAAG GCAAAATTTATATCTCAAGGGATGTGGTTTTTGATGAATTCAACTTTCCCTATCCACACATGTTCACTTCCTCAGAGGTT CCTCACCCAGATCAAGGGCTTTCTTCTATTATTTCTCTGGTACCAGCTGCTGTTCATGGTCCACCTCAAGCTGTTAATGC TCCTCCACTTTCACCTCCCTCTTCAGGGGACACTCATCCCAGTGGTTTTTCAGTTCAGCAGCAGCCTAGTCACTCACCTA GTCATGGATCATCTTCTGGATCAGCACAGCCAGGTCATAATAATTCTGCAACTTCTTCTTCTACTGGTGCAATTGCTCAG CCCATTGGGAATGTTCATCCCATGCAAACAAGGGCAAAATCTGGTATTGTCATGCCCAGATTATTTCCCACACTTCTCCT AACCCAAGCAGAACCTACAAACTCTACTCAAGCATTAAAGGATCCTAAGTGGAAGGCTGCTATGCAAGCTGAATATGATG CCTTGATGGCCAATGGAACCTGGACTTTGGTTCCACTCCCTAAGGATCGAAAGCCTATTGGCTGCAAATGGGTATTTAGG GTTAAAGAGAATGCTGATGGGACAATTAATAGATACAAAGCAAGGTTGGTGGCCAAAGGATATCACCAAGTGAAAGGGTT TGACTACTCAGAAACTTTTTCTCCAGTGGTAAAGCCAATTACTATTCGCATAATCCTCAGCTTGGCTATCACTAAGAAGT GGCACATTCATCAACTTGATGTGAATAATGCTTTTCTTAATGGGGCACTTCAAGAGGAGGTCTACATGACACAACCCTCT GGTTTTCTTTGTAAAGACAAGTCTTTTGTGTGCAGACTGCACAAGGCTCTCTATGGCCTCAAACAAGCCCCAAGAGCTTG GTTTGAAAGGTTAAGGGCAGCTCTAGTTAAGTATGGTTTCACTCCTAGCAAATGTGATCCTTCCTTGTTCACTTTCTACA CCAAAGGTTGTGTTATCTACATTCTTGTTTATGTAGATGACATTATTATTACTGGGAATTCACTGCCATTAGTTCAACAA GTGGTGAAGAATCTTGATTCAGAATTTTCTTTGAAGCAGTTGGGGCAGCTAGACTATTTCCTAGGTGTTCAAGTTCATCA TTTGAAGGACAGATCCTTACTTCTTACACAAACAAAATACATCAATGATTTGCTTGAGAGAGCAGAAATGGGGGAGGCCA AAGGCATATCTACTCCCATGATTGGAGGTGCTAAGTTGAGCAAATATGGCTCAGATTATTTTGCAGATCCAACATTGTAC AGGTCTATTGTTGGTGCTCTGCAGTATGCTACTTTGACAAGACCAGAGATTAGCTTTGCAGTGAATAAGGTTTGCCAATT CCTCAGCCAGCCCTTGGAGGATCATTGGAAGGCTGTCAAAAGAATACTTAGGTATCTTAAAGGCACCATACATCATGGTC TTCACCTTAGGCCTTGTTCCTTACACACTTCTGTCCCTCTTGTGGCCTTTTGTGATGCTGACTGGGGATCTGACCCTGAT GACAGACGATCAACCTCGGGCACTTGTGTCTTTTTTGGTCCAAATTTGGTCTCTTGGAGCTCCAAGAAACAGACCTTGGT TGCTAGATCTAGCACAGAGGCAGAATATCGCAGCCTGGCCAATACATCAGCAGAATTACTTTGGGTTCAGTCATTATTGC AAGAGCTTCAGGTTCCCTTTTCTCCACCTCGAGTATTTTGTGATAATATGGGTGCAGTTGCTCTCACTCATAATCCTGTT CTTCATACTCGCACCAAACATATGGAGCTTGATATCTTCTTTGTGAGGGAAAAGGTTCTTGACAAGACTCTTTTTGTTCA TCACATTCCTTCTGAAGACCAGATTGCTGACATATTCACCAAAGCTCTTTCCCCTACTAGGTTTGAGTATCTTCGTTCCA AACTCAAGGTGCTTGAGCGGGTTCCTTCTCCCCCACCTTGAGTTTGCAGGGGTGTATTAGAGTATACTACTCGTGTTAAG TAAAGCTACTGATTGTAGCTGAGTTAGTGTGTTAGTTATGCTTGCTTAGCTGTCAAGCTTAGCTGGCATAACAGAATTAA GAGTTAGCTGTTAGAGTTTGTTAGAATTGTTAGCTTGTTCATCAAGCTTTATATTCTTCTATAAGTACTGAACTATGGTC TATTGTATCATAACCTTTGAAATGAATGAGAATTAGATTTACAGAGTTCTGAGTTTTCAACATAGTATAATCCAATGGAA CTAATCTATGTTAATCAGAAATATGATTATGTGGCTTAAGAACTCGCCATTATATTTCATGTATCTGTTTATTTATTTCT GTATGGGGCACTTTTTGAGTTGCTGTTTCATTTGGATATGCTACAGGTTGTTTTTCCAAGCTTTGGTGAGAGGTACCTGT CCTCTGTGCTATTTGAGTCGGTCAGACGAGAAGCTGAAAGCATGACTTTTGAGACCTGA
CDS sequence (LotjaGi2g1v0455300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGCTTGAAAGGTCTGGAATCGCTGAAGATGTTACACAATTGATTGGCAAAACCCCATTAGTATATCTAAATAAACT TGCTGATGGTTGTGTTGCCCGAGTCGCCGCCAAGCTGGAATTGATGGAGCCATGCTCTAGTGTAAAGGACAGGATTGGCT ATAGTATGATTGCTGATGCAGAAGAGAAGGGACTTATCACACCTGGAAAGAGTGTTCTCATTGAACCAACTAGCGGTAAT ACTGGAATTGGATTAGCCTTCATGGCAGCAGCTAAGGGTTACAAGCTCATAATTACGATGCCTGCTTCAATGAGTCTTGA AAGAAGAACCATTCTATTAGCTTTTGGAGCTGAGTTGGTTCTTACTGACCCTGCAAAAGGAATGAAAGGAGCTGTTCAGA AAGCTGAAGAGATAGTGGCTAAGACTCCTAACTCCTACATGCTTCAGCAATTTGAAAACGCTGCCAATCCCAAGGTACAC TATGAAACCACTGGTCCAGAGATATGGAAAGGCACAGCTGGTAAAGTTGATGCACTTGTTTCTGGGGTAGGTACTGGTGG TACCATAACAGGTGCCGGGAAATATCTTAAAGAGCAGAATTCCAATATAAAGATGATTGCTGTGGAACCAGTTGAAAGTC CAGTGCTCTCAGGAGGAAAGCCTGGTCCACACAAGATTCAAGGGATTGGTGCTGGTTTTGTCCCTGGTGTCTTGGATGTC AATCTTCTGGATGAAGTCATTCAAATATCAAGTGATGAAGCTATAGAAACTGCGAAGCTTCTTGCACTTAAAGAAGGCCT ATTCGTGGGAATATCTTCAGGAGCTGCAGCTGCCGCTGCCATTAAGATAGCAAAAAGACCAGAAAATGCTGGAAAACTTA TCGTTGTTGTTTTTCCAAGCTTTGGTGAGAGGTACCTGTCCTCTGTGCTATTTGAGTCGGTCAGACGAGAAGCTGAAAGC ATGACTTTTGAGACCTGA
Protein sequence (LotjaGi2g1v0455300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALERSGIAEDVTQLIGKTPLVYLNKLADGCVARVAAKLELMEPCSSVKDRIGYSMIADAEEKGLITPGKSVLIEPTSGN TGIGLAFMAAAKGYKLIITMPASMSLERRTILLAFGAELVLTDPAKGMKGAVQKAEEIVAKTPNSYMLQQFENAANPKVH YETTGPEIWKGTAGKVDALVSGVGTGGTITGAGKYLKEQNSNIKMIAVEPVESPVLSGGKPGPHKIQGIGAGFVPGVLDV NLLDEVIQISSDEAIETAKLLALKEGLFVGISSGAAAAAAIKIAKRPENAGKLIVVVFPSFGERYLSSVLFESVRREAES MTFET
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 323 | 323 | 2.7E-204 | – | |
PANTHER | 1 | 323 | 323 | 2.7E-204 | – | |
SUPERFAMILY | 9 | 313 | 305 | 2.49E-103 | ||
Pfam | 12 | 299 | 288 | 4.6E-68 | ||
TIGRFAM | 13 | 311 | 299 | 6.2E-142 | ||
TIGRFAM | 13 | 311 | 299 | 4.1E-136 | ||
Gene3D | 14 | 306 | 293 | 3.9E-124 | ||
CDD | 17 | 307 | 291 | 6.27785E-144 | – | |
ProSitePatterns | 38 | 56 | 19 | - | ||
Gene3D | 50 | 152 | 103 | 3.9E-124 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Cysteine synthase activity | Catalysis of the reaction: O3-acetyl-L-serine + hydrogen sulfide = L-cysteine + acetate. | ||
Biological process | Cysteine biosynthetic process from serine | The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine. |
Expression pattern of LotjaGi2g1v0455300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…