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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0004700 |
| Transcript ID | LotjaGi3g1v0004700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aquaporin-1; TAIR: AT1G80760.1 NOD26-like intrinsic protein 6;1; Swiss-Prot: sp|Q9SAI4|NIP61_ARATH Aquaporin NIP6-1; TrEMBL-Plants: tr|A9YTW7|A9YTW7_LOTJA Major intrinsic protein NIP6;1; Found in the gene: LotjaGi3g1v0004700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:611053..616768) extracted from Lotus japonicus Gifu genome v1.2.
TGAGATGTAGGATGAAAATGGCAGTAATCACCGGTGACAAATACCATGCAGTTTCACAGTCAATTCATGAAATGCATAAT CTGTTATTAGTTAAACAATATGGCACTGATACAGGATATACTTGCTGGCAATTTCATCGATCATCTTGATCAGTTACCAA AAGATCCATTTCCAATTGACTGTTAGAAATACAGGAATGAAGGACGACACAAAGAGAGGGAAAAGGGAATGAAAAATGAA GGTAGAGATGGGGAGCACCATGCATTATTGATGCCTAATGTATAAAGCCTCTTTCCCATGCTCCACAATCAAAGAGTCCC ACCATCCACTTTGGAAGATACAGGGATACCTTTTTCTCATTGGGCCAGCAGTTTCAACCACTAGTAATTTCCTTCCTTCC CATCTTTTCCAATCTATAAGTCAACTACACACACTGCTATATATACCAGACCATTAGGCACTCTCATTGTAGAGACAAAC AAAATATATAGCAACTCTAATCTCAAGGCCTTCTCTGTCTACCTCTCCACTCAAATTTCTTGTGGTTTCTGTTTGTCTAA ATTTACTTTTGTTGAGGAGTGCTGGAGAGATGGACAACAATGAGGACATTCCGTCCATACCTTCAACACCCGCAACCACG CCAGGACATACCCCTGGTCGACCCCTTTTTGGTGGGTTGGGGTCTGATAATAGAACAGGGAATAATGGTTATGGTAAGAA GAAGAAGTCCCTCCTTAAGAATTGTAATTGTTTCACTGTTGAAGAATGGACCATAGAAGATGGAGCCTTGCCCGCCGTTT CTTGTTCATTGCCATCCCCTCCTGTCTCCCTAGCAAGAAAGGTATTCCTACATAGCTAAATACTTACCCCTCCATCTCTC TATACATAATGGAAAATGCCTGTTGGAAACTCAATGATGTTGTAGTTGTAGACACAACTACCATTTGCGGAGATGCAGTA CATGTTACGTTATATACGATCTGCTCATTATGTGTTAAAATTAAATTTGCAAAGCAACTATTTTAATTTGTGAACTAAAT TTTTCTTAGTTCAAGCTAGACATAGCCTTAACATATTCCATTCTAATCTCATTTTTCTGGGAACATGCATAAGAAGGAAC TAGCAAAAGAGCAGTTTTCATTGAAGTGTTGTATAGTATTTGTTGGATATTAGCATTTGGGTTGGTTTTGCAGGTAGGAG CTGAGTTTATAGGGACTTTCATTCTGATGTTTGCTGGGACAGCCACTGCTATTGTGAACCAAAAGACACAAGGTGCTGAA ACTTTGATTGGATGTGCTGCCTCAACTGGTCTAGCTGTTATGGTTGTCATCCTCTCCACCGGTCACATCTCCGGTGCTCA TCTCAACCCTGCTGTCACCATTGCTTTTGCTGCATTGAAGCACTTCCCATGGAAGCATGTAAATTGAACAACAAGCTTTT CCCTTTTCCTTAATTGAATTGCACATTGCTACTAGCTGTTAAAGCATTCATCCTCATTATTGATGAACAAGTATTGAATT TATATGATAAGTACTTATTATTGATATACTCCACTTAAATATTAATGATTGCAGGTGCCTATGTATATTATTGCACAAGT TATGGCAGGAATTTGTGCTTCATTTGGTCTGAAAGGGGTATTCAACCCTTTCATGAGTGGTGGAGTCACGGTTCCTTCTG GAGGATATGGTCAAGCTTTTGCTTTAGAGTTCATTATCAGCTTTATTCTCATGTTCGTTGTCACTGCAGTCGCTACCGAC ACAAGGGCTGTGAGTTTTTTCATCCTCTTTCTTTGCCTTTCTTTTTTACTTTTTAGTTTATATACAAAAGTGCAAGATTG ACTTTGTGATAGAGAAAACGTCTAATAAAGTTTAAGCTAATAAGTTAATTGGTTCCAGTAAAAGTGTTCTATTAAGGCTC AGTTTGGAAGAGTTTATTTGAGCTTATCTGACAGCATAAGCTCTTATGCCAGTGTTTGAGAGAGTTTATGCAAACAGCTT ATGACCTGTCATAAGCTATTTTCAGCTTATTTTCATAAGCTACTCAGGATAGCTTATGAAAAATAGCTTATGCTTATATA CAGCTTATTTTTAATTTATTTCAATAAATTTTCAAATAGCTTATGAATAAGCGTTTATGACCATAAGTGCTTAATTAAAC TGCTTTTCCAAACGGGGCCTAAGTTGGTTGTTATTGTTTATAGACACATGTCAGGTTGTTATTGGATAACAGCAAGAACA AAGGTTATTGGAATTGTACCAATTTTCTCCTTTAGTAATTACAATATTTTTTCGTTATTTTTTTTATTCCATCAAACTTT GTTTGAATATAAAAATTTAATTAAAAAGTTAAAATAAATAGTTGGAACGACAAAAGATAAATATATAGTAATATATACTA CCTTTTTTTTTTAAATAACCCAAAAGTAGTGTATAATTAAATTAATATTTATGATGACTTTATTCATTTAAGGTTCTCTA AGATTATTTTTTAAATTAAGAATGATTATAGAGAAAATATATTAAAATATTGATATTGAAAATAGAAAAATATAATAAAC TATAAATTATAAGTTATTAGCTCAATTTTTAAGATTGAATTTCTTTCAAACATAATTAAAGAAACTAATACTTTGATCAA GTGGGTTGATGTAGTGATTTAGCACTTCATACATTTAGCAAGTGGTTGATGGTTCAAATCTCAACTCTTGTAAATGAAAA AAACTCATTAGTCAACCCCTACCGCTTAGTGCATTAACCGTGAGGTAAGGGATTAGTCCCATAGTTAACCAGTGTAGATA TCATGACAAAGTTTGTCCTACAATAGTAAATATTTGTGCTCAAGATCAATAAGTTGATGACGTTTAAGACAGAAAAAAAA GACATGTCCACAGTTTTCTCCCAGTAAATTCACATAAAATTTGTTCACACGCGGATTGTCAATGCGAACATGTTTTACAG CAAGATCACACTTTGCCTGCGTTTTGAATAGGATTTGGAATCCTACTGGTTCCCCCATTTTTCTTTCCGGGACGAAGGTT TCGTTCTTAAATTAAGGTTCTTCCAAAACAAAAAGCAACATAAACTCTGCATGCAGGGTCTCTCATTTCATAGATGATAA GTCCCCTATGCATAACATCATCTGCAACTAATATTATGCTTATGCAGGTTGGAGAGATGGCCGGAATTGCGGTGGGAGCG ACTGTCATGCTCAATATACTCATAGCAGGGTATGTCCCAACTCAACATCTCGGCTTTCCCCAAACAATCCCAAGTTTACA AACTTGTTTCAATATCTACATGTACCCTACAATCACAAATTACCATATAATTGCTATTATATACATAGGTCCTGTTTGGA TAAGAACCAAAGAGCACATATTTGAAGTTTATCTACTAAAAAAAGCACTGAAAAAACTTCGATAAATATTCTTTGGTCCG CATCCAAACAAACTCAGTATTTCTCACATAGCATAGGTAAGGCTTGTCTGGCTCTTTTCTCTTTTTTGATTGATTCCTAT AAACTGAATAACCCTCCATACACAAGACGTGTATAACATGTTTGGATCAACACTGGGAAGTTTCATAATTACTTCTGGAA AGAAGCTACTAAGTGTGGTTTTAGGGTTTAACGGGCTTTTGATTGTGTTGTCCACCACAATCCAAACATGCTAGTAATAT TTTGAAGACATGGAAATTTTGAAAACAAACAAGACGGAACTAGCCAGTCTATGCCGTGTCTTTGTTTTCAGCTACACTTA ACGGAGAAAAATAGATGGCCTTACTCATATGAGCCTTACCTAAGGAGTGAAAAACATAAAAAGAAAAGTATAACTCCATT CCTAAATGCTAGCATTCTTACAATTTTCCTAGCATCACCTTGGTTGAGAGGGATTTTTAACTGCCTCAAGAGTTAATTGT GAACAACTTACAAAATTAGCATACAAAGATATATCTAAAACAGCACCTACAAAGAAAAAAAATAAGACTTATCTGATCAT ATGTTTCATACTGTACTGCAGGCCAGAAACCGGAGCCTCCATGAACCCAGTAAGAACACTAGGTCCGGCGATTGCCGCAA ACAACTACAAAGCCATCTGGGTCTATCTGGTAGCTCCCGTACTTGGAGCTCTGAGTGGGGCCGGTATATATACTGCGGTG AAGCTGCCTGATGAAGATGAAGATAGTGCCAAGGTGGTGGGTTCAAACCACCCCAGCTTCAGAAGGTGAATTGTCCCCAT GGTCATATAGGTCATCAGATTAGATGTTTAATATGGAAAGCTAGCAAAAATAAGAACTTGCGCTTGTGCACATAGAAGAT ATACAAAATATGTGTTCAGGTGCATGGGGTATCTATTACATCCAAGCAAGAACTGTGTGCTGTTTTGGCTCTCATGCAAA TACAATACCTATTCCCTGTTTTCTTCATCTTCCTGTTCTCCTTCTCTTGTGATAAAACTAAAAGAAAGAGGAAGAAAAGA CTGATTAGCAATTAGTCAGTAATTCTTCGATGTTCCAAGTGCATATCCGATAAAGAAAACCTTGGAAAGAAGCCATTAGC AAGCTTTACAAATTTCATCCCACGAAAAAACACAAAGGGAGAAGCATTTACAGAAATAGCTGGTGTTTTCTCTCCAACCA AATGGGAGTAATCAATGTTAAACATAGCAAGATGGCATATGCTTTTGTTCTTTTCTCATTTTTCCATTTCTCATTTTTCC ACAATGTAAAAATTATGTGTGTTTCTATATCAGACATCAGTTGAGACGTTGAGTGCAGTGTAAACGAACTTTCATTTCAT TTCATTCAGTCTCGAGATAAGTGCCAACATCAGTTTGTGTCGATGACCACGAGTATTCAAACATAGTCTACAAAGTGAAG TTAATGCAAATGACACTAGACATAAAAATAAGGCAAACATTAAGATGTAACAGAAAACAAACAAATAAGAAAAAAAGAGT TTCAATTACAAGAAAGAAATTGGTAAAAATGTGCTAAAAAAAATGATGAATTGACAAAAGAACTGCACTCATCTATGTTC CTAAAGCACCAAAATGAACTAAACAACTGACATTAACTATCAAAGCAGTTAAACTTAGCAAATTTCATTAGTTTAATTCA TTATTTTAATTCATCCACAGTATAACAACAAGAAAACAGAAAATGAGATCAAAGTGCAACACAGGTATTTACCTTGATTG AACTGCAGATAAGAAAATGGTGGCAGTTGTTGAAGGAGGAGCAAAAGAGGGGAAAATTGAAATCAAACAAGGGAAATATC CCCTTGGTTTTGAGGGTGAGAGTAAGAGTGAGGGATTTGGGATCGGAAGAGAGAAAGAGCGAATGAAGCGATGAGGACAC CGAGGAGATCGGCGAGGGCGTCCTTGAAGGAAGCACCGGAAGATTGGAAGTAACCGAGGTGATCGGCGGCTTCTTTGGCG GCGCCGGCGAGAAGAGAGGCGATGGATCCAATGGAAATGGCGCGGCGGCGGAGGAAGGGGAATGGGGCGAGGGAAGCTAG CTTGTAGAACAGGAGGGTGAAGGACAGACACATGATCACGTGATAAAACTTGTCCGCGCCAAGCCACGGGTCGCCATCGT CATTCTCCTCCATGCCACCCAAAACCTCTGTTTTTCCTTCTCTTGTTCTACTCTAAATTTATAAAATAATTTAATTTAAT GAAAAATGTCTTTGTTACATCTTTAAAATAACTTTG
CDS sequence (LotjaGi3g1v0004700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACAACAATGAGGACATTCCGTCCATACCTTCAACACCCGCAACCACGCCAGGACATACCCCTGGTCGACCCCTTTT TGGTGGGTTGGGGTCTGATAATAGAACAGGGAATAATGGTTATGGTAAGAAGAAGAAGTCCCTCCTTAAGAATTGTAATT GTTTCACTGTTGAAGAATGGACCATAGAAGATGGAGCCTTGCCCGCCGTTTCTTGTTCATTGCCATCCCCTCCTGTCTCC CTAGCAAGAAAGGTAGGAGCTGAGTTTATAGGGACTTTCATTCTGATGTTTGCTGGGACAGCCACTGCTATTGTGAACCA AAAGACACAAGGTGCTGAAACTTTGATTGGATGTGCTGCCTCAACTGGTCTAGCTGTTATGGTTGTCATCCTCTCCACCG GTCACATCTCCGGTGCTCATCTCAACCCTGCTGTCACCATTGCTTTTGCTGCATTGAAGCACTTCCCATGGAAGCATGTG CCTATGTATATTATTGCACAAGTTATGGCAGGAATTTGTGCTTCATTTGGTCTGAAAGGGGTATTCAACCCTTTCATGAG TGGTGGAGTCACGGTTCCTTCTGGAGGATATGGTCAAGCTTTTGCTTTAGAGTTCATTATCAGCTTTATTCTCATGTTCG TTGTCACTGCAGTCGCTACCGACACAAGGGCTGTTGGAGAGATGGCCGGAATTGCGGTGGGAGCGACTGTCATGCTCAAT ATACTCATAGCAGGGCCAGAAACCGGAGCCTCCATGAACCCAGTAAGAACACTAGGTCCGGCGATTGCCGCAAACAACTA CAAAGCCATCTGGGTCTATCTGGTAGCTCCCGTACTTGGAGCTCTGAGTGGGGCCGGTATATATACTGCGGTGAAGCTGC CTGATGAAGATGAAGATAGTGCCAAGGTGGTGGGTTCAAACCACCCCAGCTTCAGAAGGTGA
Protein sequence (LotjaGi3g1v0004700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDNNEDIPSIPSTPATTPGHTPGRPLFGGLGSDNRTGNNGYGKKKKSLLKNCNCFTVEEWTIEDGALPAVSCSLPSPPVS LARKVGAEFIGTFILMFAGTATAIVNQKTQGAETLIGCAASTGLAVMVVILSTGHISGAHLNPAVTIAFAALKHFPWKHV PMYIIAQVMAGICASFGLKGVFNPFMSGGVTVPSGGYGQAFALEFIISFILMFVVTAVATDTRAVGEMAGIAVGATVMLN ILIAGPETGASMNPVRTLGPAIAANNYKAIWVYLVAPVLGALSGAGIYTAVKLPDEDEDSAKVVGSNHPSFRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 84 | 84 | - | – | |
| MobiDBLite | 1 | 39 | 39 | - | – | |
| PANTHER | 19 | 301 | 283 | 2.4E-150 | ||
| PANTHER | 19 | 301 | 283 | 2.4E-150 | – | |
| Gene3D | 75 | 303 | 229 | 1.1E-66 | ||
| Pfam | 79 | 288 | 210 | 5.6E-52 | ||
| SUPERFAMILY | 80 | 297 | 218 | 1.01E-63 | ||
| CDD | 83 | 288 | 206 | 1.01312E-59 | ||
| PRINTS | 83 | 102 | 20 | 5.5E-42 | ||
| Phobius | 85 | 105 | 21 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| TIGRFAM | 87 | 288 | 202 | 1.5E-51 | ||
| Phobius | 106 | 110 | 5 | - | – | |
| Phobius | 111 | 131 | 21 | - | – | |
| TMHMM | 114 | 136 | 23 | - | – | |
| PRINTS | 122 | 146 | 25 | 5.5E-42 | ||
| Phobius | 132 | 159 | 28 | - | – | |
| ProSitePatterns | 140 | 148 | 9 | - | ||
| PRINTS | 159 | 178 | 20 | 5.5E-42 | ||
| Phobius | 160 | 178 | 19 | - | – | |
| TMHMM | 163 | 185 | 23 | - | – | |
| Phobius | 179 | 197 | 19 | - | – | |
| TMHMM | 197 | 219 | 23 | - | – | |
| Phobius | 198 | 219 | 22 | - | – | |
| PRINTS | 203 | 221 | 19 | 5.5E-42 | ||
| Phobius | 220 | 230 | 11 | - | – | |
| TMHMM | 224 | 246 | 23 | - | – | |
| Phobius | 231 | 250 | 20 | - | – | |
| PRINTS | 234 | 256 | 23 | 5.5E-42 | ||
| Phobius | 251 | 269 | 19 | - | – | |
| TMHMM | 269 | 291 | 23 | - | – | |
| Phobius | 270 | 291 | 22 | - | – | |
| PRINTS | 271 | 291 | 21 | 5.5E-42 | ||
| Phobius | 292 | 313 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0004700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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