Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0007000 |
| Transcript ID | LotjaGi3g1v0007000.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing family protein; TAIR: AT3G61600.1 POZ/BTB containin G-protein 1; Swiss-Prot: sp|Q9FPW6|POB1_ARATH BTB/POZ domain-containing protein POB1; TrEMBL-Plants: tr|A0A0B0N127|A0A0B0N127_GOSAR BTB/POZ domain-containing POB1-like protein; Found in the gene: LotjaGi3g1v0007000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:821689..827885) extracted from Lotus japonicus Gifu genome v1.2.
CGCAATCAACTGAATCAAGTGTTGTAAGTTGTAACCAAAATAAAAATAAAAAACTGAATCAAGTGTATTAAATAGGACAT GCTTATAGCATCAAAAATAGGACATGCTCCTCTATCTTTCGCACTTTGATAAACCCTCTCCACTTTGATCTGTTTGAATT CTCAAATTATATTTTTTAGGGTTTGATGTTCTAGAGAAGGAGATGGAGTCTGATTCTTGTGAATCCAGTTTTAGCTTCGC TTTCAATGATACCCGCTTTTCCGATAAGCTTCTCCGTATCGAGATCATGAATGACCCGATCAAGAGAAGGAGATGCGAAA ACGGTCTTTTACTCTCGCTCTTCATCGAATTCATTCTTGTGATTCTGAGTGATGTAATTTGAGTTTGTTTTGAGAAATAT ATATATTTCATAACTAGAAACTTAGTAAGTGATTCTCATGGATTTTGCACTTTTTTAGTTAGTTCTATTTCTATTCATGA ATTGGGTGTGTTTGTCTAAAGTGTGCAACTTGTCTAATTACATACCACTATTTATCTCACTTGCAGTTTTGGATCTTACT GCTGATGAACAAATTTCAAATTAATTTAATATAGGTGATGAAGCTGCAAACAACAATGACTCAATCTGGACCATGGATTA CTCTGGCGCTACTGTTGTTAGAGTTAAAACACTGCATATCAGTTCTCTTATCCTGGCTGCTAAAAGCCCTTTCTTCTACA AGGTAGATTAAGACCTCTTCTCTTCTTTATGTATAGTTCTGCGCCTAGCCTTCATATTTTTTATATTTTCAGCTTTTCTC AAATGGGATGAGTGAGTCAGAGCAGAGACAGATCACCCTCAGGATTAATGCATCTGGTAACTTTTTATATATTTACCTGA TCATTTTAATTTTCACTAAATAGTCACCTAAATGTTACTTCTTTTGCATTACAGAAGAAGCTGGTCTCATGGAGCTACTC AAATTTATGTATAGTAATACCTTGAATATTTCTGCCACACCTGCTTTGCTGGATGTGCTTATGGCGGCTGATAAATTTGA TGTGCCTTCATGCATGAAATACTTGCTAAATCCGCCCATGACACTTGACTCTGCATTACTCTACCTGGAGCTTCCTTATA CTGTTGTTGCAGCCCAACCACTGATTGATGCGGCAAAGCACTATCTTGTTGACCGATACAAGGATATGTATAACAAACAG TAAGCTTTTGCATTTTATTTAACTTCACTTGCATTATCGTAAGGGAAAAAACTTGAGGAACAAACCATGGATTCAAAGAA GGGACTATTGTGTTTTTGTGTATGCGTGTGTCGCATCTAATGTTTGAAGCTTGGTGGATGACATTTTCTTTGTTCAATCA ACTTCCTTCGTGTTATAAACATTTGAGAGGGTTTTTCTATTATGGCATTCCATGAAGTGTCTTTTGCAAAGCATCATTTT CTCTACGACGACATTATTGATTCTAATTGTCCATTCTTTTGAAAAAGACTTGTTTCTTTTGTTGTCATTCATCATAATGT CATCTTTCTTTTTTAGTGCTAATTATCTTGTGTTTGACCAGGGTTAAGGAAGAGCGTTTGGCCTTGCCTCTCTCTGGAAT AGAGGCAATCTTGGCTAGTGATGATCTCGTGGTTGAATCAGAAGAAGATGTATATACCTTTACATTAAACTGGGCTAGAC AAAAGTACAAGAGTCTGAAAGAAAGACAAGAAGTTCTTGGTACACGTCTTGCGCGTTTAATTCGCTTCCCCTATATGACA TGTGAAAAGCTTAAGATTGTTTTAACCTGTAATGACTTTGAACATGAGGGCGCATCTAAGCTTGTACATGAAGCCTTATC TTTCAAGGCGGAGGCTCCAGATCGCCAACAGACTTTGGCAGCAGAAGAGTCTATTTCCTTGAGTCGTCGTTTCGTGGAGA GAGCATATAAGACAACGATGGATATGTGTCTGACGCGGGCGGAGTGTGTCGCTATGTTCCCATCTGGTCATGTGCATTCT AAACCATCCCGTTTGGCTGGACAAATGTTTTTTCTATCAGCACAATGTGACATGGACGAACATGACTTTTTCCATTGCTG TTCGTTGTCTTTGGGAATGAAGACAGGTTACTCAAGAAGCATTGCTGTGGACTTTCAATTTAGCGTAAGGTTGAGGCCAA CAGTTGATTATTTTATCATGTGCAAATCCAATCACACATTTACCCCAGGGACCCGTAGCGTCAGTAGAATTAGAAACCCC TTTAAGGTTCCATGGACTTCATTCATTGCTGAGGATAGTCTTTTCTTCATTAACGACGTTCTCCACCTTAGAGCTAAGCT TTGGATCGCACATTGATCCCCTTATTTCTGTTTATGAACTATTTATTCTAGTTTGATATTATGCTTTATTTATTCTTTGT TGCATTGGTTTTTAGTGATATTATGCTTTATTTATTCTTTGTTGCACTGGCTTTTAGTGCTCGTCCCGTATGTTGTCCTA CCTCTATTCCTCATTTTTTTTGCAAGAGATGTAAAATTTCATTAAACGGAAGGCATAGAAGCCATTACGGCATTGTTTAC AAAAGTGTTCACATCTGGTGGAACTTCCTCCACCCACACCAAATATAAGAACCAAATTGAGTGGACGCGTTAGTCCTTTT TATACAAACCAACTTTAAGTTTGTGGTACATTTATTATATTTTGACATGAATGCCGTATTTAAAAACTATACATGTGCCA TAATATTTTTTTTTAGTAAGACAAGAAATTGCATTAACAGGGGAGTACAAGGGGTACTCTAGAGAAGCAGTAAAAAAAAA CAAAAGGCAAAAAACAGAAACGAAGAGGAACAACAGAAGAAGAAAAGGGAAACAAATTGATAATTAAAGCATCAAGCCAA GAGATTCCACCAATGTCCAAACAGACCAGACGCAAGGTGACATGGGTCTTGAAGCAACATAGACAGACATTCACCTCCCG ATTCAAGACCCAACCAACTTGGTCCAAAGCTACAACAGAAGCCACCAATCGCAAAGCACAAAGGTCTCAAAACAGCAACT TTGTGCAGAATCTGAAATATTGAACATTGTGGCTTTAACTGTCTTAACAAGCTGCAGGAACTTATATCCCTCTCCTTCCA CTCTAGCACAAATTCACTCTCAAGTTTTCATAGATCTGAATTTCTTCTCATGAACCTCTCATGTTCACAATTGCACATTG AATAGAAAGATTACCATCGATCAGACATCACATATTCAACAAAACAACCAAAGAAATCAATCGAGAATCATATCCAATGA CAAATAATGGGTTCTAACTTCTAACTCATATTAATTCAAACTCTAATACCGAATGTAAGCAGAAAGTTTCATGGAACGAT TATATGAAATTAGAACACCAACCCTGACTTATGAAGACATGAAATTTCATGGAACAATTATATGAAAGTTGTGCAATAAC TTTCCTCTTCCAAAAGGAAGCTGGTCAGCCAAAAATTCACTAATGAATCAAAAGATCAATTCAAATACACCTACACTAAT TCTAACAGATTTCTTCCATGATGACTTCAACCTATTCTTTAATGACACTAAACAAAGAAAGTACACATTTATAACGTGAA AATTCCATAATTTGTAAATTTGCAAGCTACGTTGATATTGGTATCAGTATCAAAATACATCATTGATTCAGACTCAGGTA AATTGAAATTGTCGAATACATACCGAGAATTCTAGTATAGTAGACAAGCAGAACATCAGCATGCTCAATTTTGAAATGAT TTTTTCTCGTTGAAAATCTATGGCCTTGGAATGCAAGTAGTGACATTTTCTCTTGATTGTTGAGTCACAACCTCTTATGA CTGGATATACTTATCAAATACGCAACTATTATAACTTTAAAATGTTCAGATATTATTCATACTAATAAAAACATATGAGA TCAAGACTAACACCATTAGTTTAAAAAAAAATGAGAAATCAGCAACTAAAAGTCAAGACTATCCAACTAGAATAAATAGT TCATAAGCACAAATAAAGGGATCAAGATGCGATAGTGAGCTTGACTATCAGGTGGAGTTTGCCTTTACTGCAGAAAAGAC TATCCTCAGCAATGAACGAAGTCCATGGAACCTTAAAGAGGTTTCTACATCCACTAGATATCCCAGCGGTAAATGTGCAA TTGGATTTGTACAAGCTAACAAACATCTCTGTTGGCTTCAACCATACACCAAAATCATAGTTCACATCAATGCTTCCCAG GCACCTTTTCTCCATTCCCAAAGACAATGAAAAGCAATGGAAAGAGTCAAGTTCGTCCATGTCACATTTTGCTGATAGAA AAAACATCTGTCCACCAAAATGGAACGCCTTAGATTGGAAATGGCCAGATGGGAACAAAGCGACGCACTTCTTCCGCTTC AGATGCAGGTACATCACACACTTATATGCCCTCTTAACAAAGCGCTGGTTCAAAGAAGTAGACTCTTTTGCTGCCAATGA CTCCGCCTTGAACGATAGGGCTTCAAGTACAAGCTTAGATGCAGCCTCATGTTCAAAGTCATTACATGTTAAGACGTCCT CAAGCTTCTGACATGTCATATAAGGGAAGCGAATTAAACGCACAAGTCGTGTACCCAAAACTTCACGCCTTTCTTCCAGA CTCTTGTACTTTTGTCTAGCCCAGTTTAATGCAAAGTCATATACATCATCATCTGATGCAACCTGGAGATCATCACTAGC CAAGATTGCCTCTATCCCAGAAAGAGGCAAGGCCATAAGCTCTTCCTCAAACCTACTCATATACAAGATTATTAGTATTA GGAAAGAAAAATGACATTGAGATGAAAATAATGAAAAATTACAAGTCTTTTTCAAAATAATGGACAGTTAGAATCAATAA TGTCTTCGTAGAGAAAATGATGGTTTGCAAAAGACACTTCATAGAATGCCATAATAGAAAAAACCTCTCAAATGTTTTTA ACATGAAGGAAGTTGATTGACAAAAAAAAAATGACGTCCACCAAGCTTCAAACATTAGACGCAACACGCATACACAAACA CACATCAGTCCCTTCTTTGAATTCATGGTTTGTTCCTCAAGATCTTTCCCTTAAGATTATGCAAGTGAAATTGAATTAAA TGCGAACTTACTGTTTGTGGGTTATATCCTTGTATCGGTCAACAAGATACTGCTTTGCAGCATCAATCAGTGGTTGGGCT GCAACAACAGTATGAGGAAGCTCCAGGTAGAGTAATGCAGAGTCAGTTGTCATGGGCGAATTTAGCAAGTATTTCATGCA TGAAGGCACATCAAATTTATCCGCAGCCATAAGCACATCCAGTAAAGCAGGTGCCGCAGAAATATTCAAGGTATTACTAT ACATAAATTTGAGTAGCTCCATGAGACCAGTTTCTTCTGCAAAAGAAGTACAGTATGGCATTTAGGCGACTTTTGATGAA AATTAAAAAGATCAGGTAAAGATATAAAAAGTTACCAGATGCATTAATACTGAGGGTGATATGTCTCTGCTCTGACTCAC TCGTCACATTTGAGAAAAGCTGCAAATATATATATATATATATATATATATGAATGCTAGGCAAACATATTTGTGGCAGA ACTATACATAGAAGAGGTCTTAATCTACCTGGTAGAAGAAAGGGCTTTTAGCAGCCAGGATAGGAGAACTTATATGCAGT GTTTTAACTCTAACAACTGTAGCGGCAGAGCCATCCATGTTACAGTTTGCAGCTTCATCACCTATATTAAGCATGTGAAA CCAAAAGTGTTGATAGAGCAGAAAGAAAGAAGAAATCAAATTAAAATAGCGTGCTCTGTTATAAGATAGATAGATAGGTT CAATGGAAATATAACAGAAAATAATCAGGAGATAGAGCGAGAGTTAGAGACCGTTTTCGCGTCTCCTCTTCTTGCAGTGG CGAAGCCAGTCAGCGATGGAGGTGACACTATCAAACGGGTCGGTCATTACCTCGATACGGAGAACCTTGTCTGAGAAACG GCTGTCATTGAAAGCGAAGCCAACATTAAAATTGGAATCCGACTCCATCTCCTTCCCTAAAAGATTCAACCCTGAAAAAA CAAAATTGAGAATTGCAATTTGCAACAGATGGAGGTGGAGAGGGTTTATCAAATCTACGTGCGAGAGATAGATCTCCAAC TCTATATCTATATATTACTAGTATGTTTACGCGTCGC
CDS sequence (LotjaGi3g1v0007000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTACTCTGGCGCTACTGTTGTTAGAGTTAAAACACTGCATATCAGTTCTCTTATCCTGGCTGCTAAAAGCCCTTT CTTCTACAAGCTTTTCTCAAATGGGATGAGTGAGTCAGAGCAGAGACAGATCACCCTCAGGATTAATGCATCTGAAGAAG CTGGTCTCATGGAGCTACTCAAATTTATGTATAGTAATACCTTGAATATTTCTGCCACACCTGCTTTGCTGGATGTGCTT ATGGCGGCTGATAAATTTGATGTGCCTTCATGCATGAAATACTTGCTAAATCCGCCCATGACACTTGACTCTGCATTACT CTACCTGGAGCTTCCTTATACTGTTGTTGCAGCCCAACCACTGATTGATGCGGCAAAGCACTATCTTGTTGACCGATACA AGGATATGTATAACAAACAGGTTAAGGAAGAGCGTTTGGCCTTGCCTCTCTCTGGAATAGAGGCAATCTTGGCTAGTGAT GATCTCGTGGTTGAATCAGAAGAAGATGTATATACCTTTACATTAAACTGGGCTAGACAAAAGTACAAGAGTCTGAAAGA AAGACAAGAAGTTCTTGGTACACGTCTTGCGCGTTTAATTCGCTTCCCCTATATGACATGTGAAAAGCTTAAGATTGTTT TAACCTGTAATGACTTTGAACATGAGGGCGCATCTAAGCTTGTACATGAAGCCTTATCTTTCAAGGCGGAGGCTCCAGAT CGCCAACAGACTTTGGCAGCAGAAGAGTCTATTTCCTTGAGTCGTCGTTTCGTGGAGAGAGCATATAAGACAACGATGGA TATGTGTCTGACGCGGGCGGAGTGTGTCGCTATGTTCCCATCTGGTCATGTGCATTCTAAACCATCCCGTTTGGCTGGAC AAATGTTTTTTCTATCAGCACAATGTGACATGGACGAACATGACTTTTTCCATTGCTGTTCGTTGTCTTTGGGAATGAAG ACAGGTTACTCAAGAAGCATTGCTGTGGACTTTCAATTTAGCGTAAGGTTGAGGCCAACAGTTGATTATTTTATCATGTG CAAATCCAATCACACATTTACCCCAGGGACCCGTAGCGTCAGTAGAATTAGAAACCCCTTTAAGGTTCCATGGACTTCAT TCATTGCTGAGGATAGTCTTTTCTTCATTAACGACGTTCTCCACCTTAGAGCTAAGCTTTGGATCGCACATTGA
Protein sequence (LotjaGi3g1v0007000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDYSGATVVRVKTLHISSLILAAKSPFFYKLFSNGMSESEQRQITLRINASEEAGLMELLKFMYSNTLNISATPALLDVL MAADKFDVPSCMKYLLNPPMTLDSALLYLELPYTVVAAQPLIDAAKHYLVDRYKDMYNKQVKEERLALPLSGIEAILASD DLVVESEEDVYTFTLNWARQKYKSLKERQEVLGTRLARLIRFPYMTCEKLKIVLTCNDFEHEGASKLVHEALSFKAEAPD RQQTLAAEESISLSRRFVERAYKTTMDMCLTRAECVAMFPSGHVHSKPSRLAGQMFFLSAQCDMDEHDFFHCCSLSLGMK TGYSRSIAVDFQFSVRLRPTVDYFIMCKSNHTFTPGTRSVSRIRNPFKVPWTSFIAEDSLFFINDVLHLRAKLWIAH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 3 | 72 | 70 | 13.115 | ||
| SMART | 5 | 103 | 99 | 2.7E-5 | ||
| PANTHER | 6 | 395 | 390 | 5.2E-160 | – | |
| Gene3D | 6 | 114 | 109 | 4.3E-16 | – | |
| PANTHER | 6 | 395 | 390 | 5.2E-160 | – | |
| CDD | 8 | 86 | 79 | 3.92778E-14 | – | |
| Pfam | 9 | 93 | 85 | 7.4E-14 | ||
| SUPERFAMILY | 12 | 94 | 83 | 3.45E-12 | ||
| Gene3D | 115 | 225 | 111 | 3.0E-10 | – | |
| CDD | 119 | 206 | 88 | 1.53808E-8 | – | |
| Pfam | 121 | 211 | 91 | 3.9E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0007000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…