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LotjaGi3g1v0008300.1

Overview

Field Value
Gene ID LotjaGi3g1v0008300
Transcript ID LotjaGi3g1v0008300.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Receptor protein kinase; TAIR: AT1G52540.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LSC2|Y3589_ARATH PTI1-like tyrosine-protein kinase At3g15890; TrEMBL-Plants: tr|I3SL22|I3SL22_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0008300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:933627..937550) extracted from Lotus japonicus Gifu genome v1.2.

CAAATTTCTTTCCTTTGAAGCTATTTCGATCCTTGTAATGTATTAAATAAATAAAATAACATATCACCCATTCTCTTATT CTCTTATTAAAAAAAGAAAATGGACCCCCCATTTGTGTGTGTTTTGTTCTTTAATTTGAAATCTGCAAACAGCTGTAGTT GAGTTAAAGAACACCAAGGGATAAAAAGAAGACTTCGCTTACACACCATTTCCATTTCATTCATCTGCTCTATCAAAACA ACAACAATAACCCTTTTTGTTCCCTTCCTTGTTTTTTGCTGGGTTTTTCCAGTTTCACATACAACGTTTTCAACAACACC CCACAAACTATGTCTGTCTTCTTCACTTTCTCTCTCAAAAGTCTTTGTCGCTGAAACAAATTCCCAAAGCAACGACTTTT ATAGCAGAGCACTTGATTTCGTTTGGTGGGTCGATTTCAAGTTTCGATTTTGTTCACTTTTTTTTCTGATCGATTGATAA GAAGAGACAGTGGGGGCTGATTGGTGGGGAGGTTATGGCTTTTTGCCCAATCTTTTGTTGTGGAAATGCTTCGGATCGGT ATGACAATGCTTCTTTAGTCTCTACTTGATAATATATGTTCCTTGTTGTATGTTTGTTTTACTTGATTTTTACCAGTATA ATTGTTTTGGATCAGATGTGATACATTGATGACATATCAAATTCCAATTTTTTTCTTCATTTTTTGAGGAAAATTAGTAC TGAATAGGGTTTTAGATTCTGGGTTTAGCTTAAATTGCAGGAATTAGTCAAATTAATGGTTAATTTGGAGGAGAGATTGT GTTTGTTCTTAATGAATTAACTCAATTAGGATAACATGTATAGTTGATTGTTCTGGGTATACCTAGTTGCTTTTTTTCAT TGATGATATACTTGAAGGTGTTTTGAAGTAGAGGTTTTAGGTTTAAAGTCTTGTCTTGCTTGTGCTTTTTTGATAGATGG TTGATGATAGTGTCTCTATTAATGCAGCAAAGGGAGAGGGAAGAAGCAACCCGCATGGAGGGTGTTTTCTTTGAAAGAAT TGCACTCTGCTACAAATAATTTCAACTATGATAACAAGCTTGGTGAAGGTGGATTCGGCAGTGTATACTGGGGCCAGCTT TGGGATGGATCACAAGTAGGAATATACTTTATTTTCTGCTCTTTGTTGCATGTTATCAAATCAGCTTTTGTTTATGGTTA TTCTTGATCATTCTAAGCTGAATTGTTTCGGTATGGTTAATTTGCTTAGTTTTACACAATATGTGTCCCAGATATTGGCC CCATTTGGAAGAGCTTATTTGAGCTTATCTGATAGCATAAGCTCTTATGCCAGTGTTTGAGAGAGCTTATGCAAACAGCT TATGGCCTACCATAAGCTGTTTTGAGCTTATTTTCATAAGCTACTCAAGATAGCTTATGAAAAAGAGCTGATGCCTATAT ATGCTTATTTTCGATTTATTTCAATAAATATTTTAAAATAGCTTATGAATAAGCACTTATGTCATAAGCGCTTATGATCA TAAGCGCTTAATTAAGCTGTGTTTCCATACGGGGCCATTATGGCCATTTGGTATCTTAGGCATCTGGCGGTATACATCTC AAAAGTTTTCCTTTAGCTTTCTCAATTTTAGTTGACCCTTAGTCTATGATGATTTTATCATGTAACACTGAAAAGGGTCA GATTGTGAGGGTGGAACTAATTCAAATGAAATAAATGAATGTAAGCACCCAACCCAGGACTGCTACTGCAGTAAATGGTC TTGAAATTTTACATGATCAGGCTCATCACGAGCAGGAAATGAAGAATTGGGTTTGGACTTTTTATGATCTTATAGGAATT TCATTACCTTGGTAAACGCCCAACTTGAAGGACTAAAATGGAAGGGAAGGAAAATCATGTAAGGTTGATTATGGGTGTAA TTTTGTGATGTGGAGCCGTGTATGAATAAGAAAGACAGCAATAGATGGGGGTTGATCTCCTCCCTATTTTTTTTACCAAT CAAATATTGAGTAGCAGGCAAAAATACCCTAAATCTGGCATCTCCACTGGCTTCTTTTTTTTCTATTTCACCAATCCTTC AATGTAAGTACGAAAGATCTCTTTCAATGATTTGTGAGTGAACTTCCAACAACTTGATGCCTTGGCTGCCTTATTAGTTA ACAGTAACCAGTTTTTTTAAACTTATTTCATTCAGTTCTGCTATCGGGCTAGGATGATTATTGCTTGAAGGAAAAACGTG ATTAAGTTCCTTAATGAATGACTCTGACTTGTGAGTTTTGATTTGACCTTAAAATGTGATTTCTAAAACACTTAATCAGA AGTTTCAGGTGCTTATGCTTCAAAATCCTCTCATAAAAACATTTTACCTGCTGCCTGTGAAACCAACCTCTTTAAAATAT GCTGATGGCCAAAATAGTAGTGTTAACTGTGTAACCTTTTTCTGAGATCTCTTCTTGTTGGCTGCTTGCAACTCTATGTA TTTTCATCTGTGTATGCATGTAGATTGCAGTGAAAAGATTGAAAGTCTGGAGCAACAAAGCGGACATGGAATTTGCTGTT GAAGTTGAGATATTGGCAAGAGTACGACACAAGAATCTTCTTAGTCTTCGTGGCTATTGTGCTGAAGGTCAGGAACGGTT GATCGTATATGACTATATGCCGAACTTGAGCCTACTCTCTCATCTTCATGGACAGCACTCATCAGAATGCCTTCTTGATT GGAATCGACGGATGAATATTGCAATAGGGTCTGCCGAGGGAATTGTGTGAGTACTAAGGACTAAACTTGCTTTCTTCATT AACTTATGCCTCTGTCTTTTTAGTAATACTAAGATTTAATGCTTTTCAGATATCTTCACCACCAAGCAACACCACATATC ATCCACAGAGATATTAAAGCAAGCAATGTGTTATTGGATTCAGACTTCCAGGCTCGGGTTGCTGATTTTGGTTTCGCCAA GTTGATCCCTGATGGTGCAACTCATGTGACCACAAGAGTCAAGGGCACCCTTGGCTACCTTGCACCAGAATATGCCATGT TAGGTAAAGCTAATGAGTGTTGTGATGTGTTCAGTTTCGGAATCCTCCTTCTAGAACTCGCTAGTGGCAAAAAACCACTT GAAAAACTCAGTTCCACAGTGAAGCGTTCAATAAACGATTGGGCCCTGCCATTGGCTTGTGCGAAGAAATTTACTGAATT TGCAGATCCAAGGCTTAATGGCGAGTATGTGGAGGAAGAGCTTAAAAGAATTGTTTTAGTTGCTCTGATATGTGCTCAGA GTCAACCTGACAAGAGACCCACCATGATTGAGGTGGTAGAGCTTCTGAAGGGAGAGTCCAAAGATAAGCTTTCTCAGTTG GAGAACCATGAACTCTTTAAGAACCCTCCAGGTGTAGGACATGATGATGGGACTTCAGCTGCTGAAGGTAGTTCAGACTT CATCTCTGAGGAGAAGGAATCAAAACATGAGTTGGAAGAGAGTACAGAACCATGATTCGTGCAAAAACGATATGGATTTG ATGTGTTAAATACAGATTGTGAAGCTTTCAGGATTGGTTTTTTTTCTTTCTCTTTGTACTGTTGGTATTATTTTATTTAT GCGGGGAAACATTTGTCATCCGTTTATTAAAGCAGCGGGTGCACGTTTGCCTTACTATGAATGTGGCTATGAACCATGCA AAATTGCTAGGAGCCTGGAATTGGGGATTTGATGTGTTGAATATACAGATTGTGAAATTGTAATTGCTTATCCATATTTT CATGGCATAATTTATGCGACACCTTGCAGGGCCACAGCCCACAGGCTGTAAGGTCCTCAATAGTAAATAGTGTCCCACTG CCATCGTGAAAACTGATGTCTTTAAGAATATAACTCTGATGGAAATGTTAATATATATCAACAATGAATGGAAATTTGCA GCGA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0008300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTTTTGCCCAATCTTTTGTTGTGGAAATGCTTCGGATCGCAAAGGGAGAGGGAAGAAGCAACCCGCATGGAGGGT GTTTTCTTTGAAAGAATTGCACTCTGCTACAAATAATTTCAACTATGATAACAAGCTTGGTGAAGGTGGATTCGGCAGTG TATACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGTCTGGAGCAACAAAGCGGACATGGAA TTTGCTGTTGAAGTTGAGATATTGGCAAGAGTACGACACAAGAATCTTCTTAGTCTTCGTGGCTATTGTGCTGAAGGTCA GGAACGGTTGATCGTATATGACTATATGCCGAACTTGAGCCTACTCTCTCATCTTCATGGACAGCACTCATCAGAATGCC TTCTTGATTGGAATCGACGGATGAATATTGCAATAGGGTCTGCCGAGGGAATTGTATATCTTCACCACCAAGCAACACCA CATATCATCCACAGAGATATTAAAGCAAGCAATGTGTTATTGGATTCAGACTTCCAGGCTCGGGTTGCTGATTTTGGTTT CGCCAAGTTGATCCCTGATGGTGCAACTCATGTGACCACAAGAGTCAAGGGCACCCTTGGCTACCTTGCACCAGAATATG CCATGTTAGGTAAAGCTAATGAGTGTTGTGATGTGTTCAGTTTCGGAATCCTCCTTCTAGAACTCGCTAGTGGCAAAAAA CCACTTGAAAAACTCAGTTCCACAGTGAAGCGTTCAATAAACGATTGGGCCCTGCCATTGGCTTGTGCGAAGAAATTTAC TGAATTTGCAGATCCAAGGCTTAATGGCGAGTATGTGGAGGAAGAGCTTAAAAGAATTGTTTTAGTTGCTCTGATATGTG CTCAGAGTCAACCTGACAAGAGACCCACCATGATTGAGGTGGTAGAGCTTCTGAAGGGAGAGTCCAAAGATAAGCTTTCT CAGTTGGAGAACCATGAACTCTTTAAGAACCCTCCAGGTGTAGGACATGATGATGGGACTTCAGCTGCTGAAGGTAGTTC AGACTTCATCTCTGAGGAGAAGGAATCAAAACATGAGTTGGAAGAGAGTACAGAACCATGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0008300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAFCPIFCCGNASDRKGRGKKQPAWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADME FAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSSECLLDWNRRMNIAIGSAEGIVYLHHQATP HIIHRDIKASNVLLDSDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANECCDVFSFGILLLELASGKK PLEKLSSTVKRSINDWALPLACAKKFTEFADPRLNGEYVEEELKRIVLVALICAQSQPDKRPTMIEVVELLKGESKDKLS QLENHELFKNPPGVGHDDGTSAAEGSSDFISEEKESKHELEESTEP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
11 115 105 7.7E-33 –
PANTHER
PTHR27001
13 353 341 2.6E-159 –
PANTHER
PTHR27001:SF774
13 353 341 2.6E-159 –
SUPERFAMILY
SSF56112
22 311 290 1.48E-79
IPR011009
ProSiteProfiles
PS50011
40 328 289 37.404
IPR000719
SMART
SM00220
40 311 272 1.2E-27
IPR000719
Pfam
PF00069
41 308 268 2.7E-43
IPR000719
CDD
cd14066
46 313 268 1.46445E-104 –
ProSitePatterns
PS00107
46 68 23 -
IPR017441
Gene3D
G3DSA:1.10.510.10
116 330 215 7.8E-59 –
ProSitePatterns
PS00108
162 174 13 -
IPR008271
MobiDBLite
mobidb-lite
325 366 42 - –
MobiDBLite
mobidb-lite
348 366 19 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0008300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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