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LotjaGi3g1v0010500.1

Overview

Field Value
Gene ID LotjaGi3g1v0010500
Transcript ID LotjaGi3g1v0010500.1
Lotus japonicus genome version Gifu v1.2
Description Pentatricopeptide repeat-containing protein; TAIR: AT1G52620.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620; TrEMBL-Plants: tr|A0A0R0G1J6|A0A0R0G1J6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0010500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:1151302..1160368) extracted from Lotus japonicus Gifu genome v1.2.

CTGAATTAAATGGATTAAAATTAGAAAACACAAGCACTGGAGTCTGGAGAGTGAAGATGATACATTTTCATGCTTCTCCC ATCATGATTGCAACTACATGCAACACAAATGCTTGAAACCTTAACATTGTTCCTTCAAACTGAAACCTTTCCTTTACTCA TTTCCAAACCCAATGTCGAAGGCCATCCTCTCTCGAATCAAACCTCGTCACCGCCCGAGAGGCACCGCATTCTTGCCTCC ACGCATCAAGAACCTCGTCGTCGACGTAATCCGAATCCTCAACTCCGACCAACAATGGCAGGATTCCCTCGAATCTCGCT TCGCTGAATCCGATATCGTTGCTTCTGATGTTGCCCATTTCGTCATAGACCGAGTCCACAACGCTGTGCTGGGTTTGAAG TTCTTTGACTGGGTTTCAACCAGACCCTTTTCTCCTTCTCTCAATGGGGTTGCGTATTCTTCTCTTCTCAAGCTCTTGGC CAGGTCCAGAGTGTTCTCGGAGATTGAGCTGGCGTTGGAAAATATGAGAGTTCAAGACTTGAAGCCTACCCGTGAAGCAT TGAGCTGTTTGATTCTTGCATATGGAGAATCTGGGTTGGTTGATAGGGCCCTCCAGCTATTCCATACAGTGCGTGAGATG CATAGTTGTTTCCCCAGTGTTGTTGCTAGCAATTCATTGCTGCAGGGTTTAGTGAAAAATGGGAAAGTTGAAATTGCACG TCAGCTGTATGAGAAAATGCTTGAAACAGATGATGGTGGTGCAGGTGCGGTTGTGGATAACTATAGCACCGCAATAGTGG TGAAGGGCCTATGCGACTCGGGGAAAGTTGAGGAAGGCAGGAGGTTGATTAGAGTTCGATGGGGAAAGGGTTGTGTGCCG CATGTGGTGTTTTATAATTTGATTATTGATGGGTGTTGCAAGAAGGGTGATCTTCAAGGTGCAACTAGAGTTCTCAATGA ATTGAAATTGAAAGGATTTTTGCCTACGTTAGAAACTTATGGGGCTTTGATTAATGGATTTTGCAAGGCAGGGGAGTTCG AAGCGGTTGATCAGCTTATGGTAGAAATTGCTTCGAGGGGATTGAAAGTGAATGTACAGGTGTTTAATACTATTATTGAT GCCGAACACAAGCATGGTTTGGTAGAGAAAGCAGCTGAGACGATGAGAAGAATGTCTGAGATGGGTTGTGAGCCAGATAT TGTAACTTACAATACTCTAATTAACTTTTTATGCAGGAATGGAAGGATTAAAGAAGCTCATGAACTCTTAGACAGGGTGA AAGAAAGGGGATTGCTTCCTAATAAGCTCAGTTATACGCCCCTCATGCATGCTTATTGCAAGCAAGGTGATTATGAGAAG GCATCAAATATGTTTTTCAAGATTGCTGAAACAGGAGATAAACCGGACTTGGTTTCTTATGGAGCTTTTATCCACGGAGT TGTTCGTTCTGGGGAAATTGATGTTGCACTGATGGTCCGGGAGAAAATGATGGAGAAGGGTGTATTTCCTGATGCTCAAA TTTACAATGTTCTGATGAGTGGTCTCTGCAAGAAAGGGAGCTTTCCTGCCGCAAAACAGCTACTTTCAGAAATGCTTGAT CAAAACGTTCAACCTGATGTATATGTTTTTACAACCTTGATAGATGGGTTTATTAGAAATAATGAACTTGATGAGGCAAA AAAGCTTTTTGAAGTCTTGCTAGGAAAGGGTAAAGATCCTGACATTGTGGGGTATAATGCCATGATTAAGGGTTTCTGTA AATTTGGAAAGATGAAAGATGCTCTATCATGCTTAAATAAGATGAAAAATGCGCATCATGCTCCAGATGAATACACTTAT TCCACAATTATAGATGGATATGTAAAGCAGCATGACTTAAGTAATGCACTCAAGATGTTTGGACAGATGATGAAACAGAA ATTCAAGCCAAATGTGGTCACCTATACCTCCTTGATCAATGGATTCTGCAAGATAGCAGATATGGGCAGAGCAGAGAGAG TTTTTAGAGGGATGCAATCTTTCAATTTGGAGCCTAATGTTTTCACATACACTATAATAATAGGAGGGTTTTTTAAGGAC GGTAAACCGGAAAAAGCAACATCCTTTTTTGAGCTAATGCTGATGAACAATTGTCCTCCAAATGATGCTACATTCCATAA TTTGATAAATGGTTTAACAAATATCACAAATAGTCCAGTTCTTGTTGAAAAAAATGAGTCTAACGAAATTGACAGGTCCT TGATTTTGGATTTCTTTGCAATGATGATATCAGATGGATGGGGCCCTGTGATTGCTGCTTATAATTCTGTTATTGTTTGT CTTTGTAAGCATGGAATGGTTGGCATTGCTCAATCATTGCAAACTAAGATGCTGAGTATGGGGTTTCCTATGGATTCTGT ATGTTTCACTGCTCTGCTACATGGCTTATGCCAAAAAGGACTATCAAAAGAATGGAAGAATATTATATCATGTGATCTGA ATAAGATTGAACTCCAAACTGCTGTTGCATACTCCCTGAAATTAGACAAATACATATATCAGGGAAGGCTCTCAGAGGCT TCAGTTATTTTACAGACCTTGATTGAAGACTCTAAGTTTTCTGATCAGCAAGATGAAGATCTAAAGGTCATAATACCATA GGGAATGAAGAAATTCCCATACTGCATTGGGAAATTCTACAGAACTGTAAGTCAACCAACTTGCCTGCCTCTTATGTGAA TATGCACATAATGTGGCTTACACAGAATTTTAAAACAGACGTCCATATTTTGTATGCTTTGTGGCAGCACGTATCAGAGA GACAGTGAGTGCAAGTTATCTTGTGACCCTGGCTCGCTTTAAAAAGTGGGTTATTTACTCAATGCGTCAAAGCATGGAAG ACAGCTTCATGAAACAATATAGGGATTCTTGATTGATATCAATTACGCAGTTGCAAGACATGTATATACTGGCCTGGGAT GCATGACAGTTTAGTTTCCTCTAAGTGGAAGCATCAGGTGCATCTCTGTATTACTTACGCTCGAAAATTTACATTAAAGG GTGGCAAAAGCCCAATTTCCTTAGCCTCTTGTACTCATTAGCTCTGAAAGCTCTCCCAGTCCTTCACAGTTTCTACGAAC ATCGAAAGAAATTTTCCATGAATATCATGACCTGTAAGTTATTTCTTCAGTTTTTGGCAATTCAGTACTTAGATTGGGAA ATAGTTCAAAGTCTAGTTAAAAGGGCACTCAGTTCTACTTCATCTTGGCAGCTAGTTAGATTATGCATGGATTATCATTC TCGCAGCCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACATTGACTCACCAAGAGGTAGTGGCTTTTTG ACCTGGCTTCATGGGATGAGTATGTGCGGAAAACACTCCAATTCAACCATTATTCTCATGGTTAAGCCGCCGCATCAATA GAGCCCTTGTAAATTGTAGTTGTTGTTGCCTCCAATTGCTGCCGCTGCCTATTGTTTTGTTTCTCACTCACATTCAGTCT TCTCCAAGTCCAACTCTAATAACAAATTCACAAGCTGAGCCCCATGAAGCAGCTTTGGAGTAGGTTGAATTCCTTAGAGC ATCTGACAACAAATCAGAGCTATTTGATGGTATGGTGTTGTAGGAATTGACCAACTTCTCGGTTCTAACCGAACAACACG AGCAAGAGATTCAAGTTTTTAAGTCAATTGTCATTATCAATTGGCATCAAGTGAGTGGTGTACAGAGAGGGGTTTTATTG TAATAATTTGACATTTGGTACTATGTAGCTTAAGGTGGGGAAAACAGATTTGTTGTATAATGTATGTAGCTGAGGGTAGC ATATCAGAATGTCATCAGTGAGGGAAAGAAATGGTGTTCTTTGCACATAGATGCAATATGTTTGTTTCTTTTGAATAAGA AGCTCACATGTTTGACTAATTTCAAGTGAACTCATCTCATTTTTTCTTGAACTGGTATAGTAATAAAGAAGAAAAGAAAG GAGAACTGTTGTGATTATGTTTGTTAGTATCTGCTCGTTATGTGGTTGAAAACATTACAGAGCAAGTTAATATCTCTTGA AGAGAGCAAGTCATATCATATATATAGCCAATGCAAATATGCTAACCCTTTATTGTAACTTTCAGCTCCAGCCAAAGATG AAATATGATAATATGCTCCTGGTGGCTATAATGATTTTGGTATTCTAATATATTTATTTTTCAATTCATCCTTGCAGGTG GAAATGGATGGTAGTGTGAAATTGGGTGCAGATGACATTGTCTTCAGCTGCTACCTGAGTAATATGCAGGGTTCAACAGT TAAAATTTTACATGACTACTATTAGAGGGTCGCAAGTTGCTACTGGTTCGAAGGACACATTGGAGTTGGAGTTGCAGCTG CCATCAAAAGGATACTGGACTGCCTATTGCCTGCGGCCCTGCGCCAAAAACAGGATTTCCCTGCCCCCTCTCAAAAGTCA ACTGGTGAAGTGCACATCCCGTTGCAGAACTTCAGGGTGTCGATTCCCTCGCTTGTCTGTTGCCACTACCGTAAACAGGA CTGCTCCTTTGCCATGAGGATCTCACCAAGGGTATTTCAAAACCTTTTGTCTTCATTTGAAATTTTCTCTGTTTACTATT GTGTTACCATGCCCAACTGTCTTTAACTGATGCATTTGTCCACATTTTGACTATGGCCTTCACAGATTAAGAAGCAAGGA GCAGAGGAGAGACTCAGATAATGCAGATGCAAGAGATGCTTCGATGGCTCAGTGAGAATTTTGTGACTTAGTATACTGGT GTTTGTTGTTTGTTGCCTGTAGAAAACCTTTTGAATTAATTGTGACTTGTAGGTGCATTGGCAGTGTAATAAGCACAAGA AATAAGCAAATATGCTTCTCTTGCTTCCAACACAAACTGGAAGTTCTCTACATCCATTTGTTGAGAATTAATACAAAATG TAATGGGTTAGTGTTAGACCCTGGGATTTCCAAGCAGGCCCAAATGTCACTTATGAGCCTTTGATCCATCATTCAACCAA GGAATATGGATAGTGTATTCTAGAAGGGGCAAAGTGGGGATTACTAGCAACTACCTAACAGAATAGAGAGAGGAATATGA TTGTAATAGGCCATTATATAAGAAGGGAATGGAGAGGTTGAGAGGTCATCTTTGGATCATTGAGTTTGTAGAGATGAGTA GGAAGCTCTAAGCTTCCTATAGGAGCTAGGCTCTGTGTCAGATTTGGGATACCATTCCCTCTCTGTATTTCCATTTGCCC ATCAAATAAACAATCTGTTCATTCTATTTCTTGCATTTATTTTCAAGGTCCACTGTTAGGAATCTGGGTTCCTAACAAAA TGGTCCGACCTGCCGGATTATCGAAGGAGAGCCAGTGCAAGCCACCAGAGAAGGAGAAACAAATGGAAGCCAGGGTTGAT GCGCTGAAAACCACGATCTCAGAGTTTCGCGCTACTCTTGCTGATGTGCAGGCCACTATGAAGGAAACTCAAGCGAGTTT GCTCGCAATGCTTGAGCGAACCTTGGGAAAGACGATGGCTGATGAAGGCGGTTCTGGGGGAGCAGTGAAAGAAACGCCGG TGAAGGATCTGCTTTCACCCCGGGTTCTGATGATGGAACGAGCCATGGGAAAGAGGATCCCCGCTGATGAAGAAGGGAGC CGAAATGGAGGACCAGAACAATCAGGAGAGAAGACCCCAGAGCAAACTGGGAAGAAGGTGGTGGCGATTCAGAGTCGCGA TCTGGAAACAGAGAAGGGACCGACGACCTTGAAGGAAATGCAAGCCATCCCGGAGGCCAAGGCTCTAATGTTGAAACTCT CCACTCCGACGAAGCAGGAGGAAGAAGGAACGCATGAGAAGCAAGCGGAAGAGGAAGCCGGGTCGACCCGTCCGCCGGCG AAGCCACCAAACCCTTCAGGTAGTACGCTTGAACTTATAAAGTGGGAAGGAGAGAATTGTTTTCCCCGGAGTTGTTGGAA GGAAGCAGTACAACCACCCCCGCCACCGGCAAGGCCGCCGGAGTTGTGGCGTGATGGGGGTTTCTTGGCACCGCTTGTTC TGTCGAGTTGTGAGGAAATAGATCGTGGGCACAGAGGAAGAATGGGTAAGGGACTGAATTGGGTTGACACAACAAATGGG TCAAGCCCAAGTCTCCCAAGCCTCAAATGGTTGGAATTGGACCAAACAAACAATTGGGCCCAAAAGACAGAAGTGGTACA ATGTTATAACCAGGAAGGCAAACACGGGTCACACATGGAGATGAAGACAAGCCTATCACCTCGAATACAGAGATCGACAC GTTTCCAAAAAGGGAAGGAATTGCAGAATTCTGGGGACACAACAGAGAAGAATGGCAACGGATTCACTGAGGGCATGTGG TGCTCAACTCAGGAGTGTTTATCGACATGTGGGTCGACCAAAAGACCCCCATCAAAACCTCCTCCCTATTGCGGCACCGT CACGGAGGTCGTAGCTGCACATGTAGCTAAACAGGCAAGCCACCACAGTATTGAAAGGGACACAACCAGCGAACAAACTG CAGGAGAGTGGGCCATTTCAGTTTTTGGGTTTAAACCCAAATTATCCATTTACAAGGGTCAATATGGAGTCAGATTACAT GTTCCAGAGTCACAAATAAAATTGCAAAGGATGTGGAAAAACAACTCAGGTGATTTACAAGTTTTTACTGCATTTGTGAT GATGTTTTCAATTCTGGGCAATAAAAAAAAGGAGGGGGATCGGGGTGGGAGTCATTGGGTTCCACCATCTCTATCACAGG GTCAATCAAGTTCGGGGACATACTGGTTAAATGCCTCTGTTGAATTGATTGTTGGGTTTCAAAGTGTGGATTCTCCAAGT GAAGAGCTCAATGCTTCGGGGTCAAGACATGAGCAAAAGGGGTGGTATCAAGTTGATGACCACAATACAGTTCTTGAGTT TGTCCAAGGTAAGGCGGGAAGTGGAAGAGACAATGGCTTGGGAAATATCAGAGTGCTGAGCCTAGCTGTTGAGGGTTGCA CTACCTGGCTACTGCAGAGGCTTATTTTTGTAGATGGTGTTTCACTGCTGTGTCAACCACTGTTCATCAATTGTAATTGG CCCAACACTTTATGCATATGGTACTCTTTCCGGTTGCAACTATGGGATCCAGGTAGAAGCTGTGTTGATCACTTGTGTTT TTGTGGCAGAATTGTTCATTGCAGTGGCTGGTATTCTGATGAGGTGACTGAAATGAGGGTTGTGTGCCAACTATCTTTCT ATTCTGTTTTTGTTTTTGAGGGATTTGAATGGGTCTTCATCAAGCTCAGGGCTCTTAGAGAAAATTCAGTTGTGACCCGT GATTGTCCCCAGATGACTGCTCCCTACTATGGCCCTTATCCTATAATTGCAAGGATTGGCGCGGTGGCTTAGATTACAAT TATCTGAAGGAGGCCGCGTGCACCCTGTTTTCCATGCCTCATTGCTTAAAGAAGCAGTTGGAAACAATTCTGTGGAACTA CAACTTCTAGATCACTAGACAGGAGAAGAAGTGGCTAGTGTGCATCCTTTTTCAGTAATTACTAATCGCTTCACTACCAG ACAGGGATCTACACTTCCTCAGGTCTGGATCCAATGGCAAGGCAAACCTGCGGATGAACCAACATGGAAGGACACTCTTA ACATCAGAAGCCAATTCCCTGTTTTCAACCTTGAGGACAAGGTTGATCTTTCAGCAGGTGGTATTGTTAGACCCTGGGAT TTCCAAGCAGGCCCAAATGTCACTTATGAGCCTTTGATCCATCATTCAACCAAGGAATATGGATAGTGTATTCTAGAAGG GGCAAAGTGGGGATTACTAGCAACTACCTAACAGAATAGAGAGAGGAATATGATTGTAATAGGCCATTATATAAGAAGGG AATGGAGAGGTTGAGAGGTCATCTTTGGATCATTGAGTTTGTAGAGATGAGTAGGAAGCTCTAAGCTTCCTATAGGAGCT AGGCTCTGTGTCAGATTTGGGATACCATTCCCTCTCTGTATTTCCATTTGCCCATCAAATAAACAATCTGTTCATTCTAT TTCTTGCATTTATTTTCAAGGTCCACTGTTAGGAATCTGGGTTCCTAACAGTTAGTATATAGTAGTAGTTACTGTGCATT ATATGTGTAATAGAAATTAGTGGGTATTAAATAATGTGATAATAAAGGCTTGACTCAATTAGTATAAAGCCTTTATTATG TCCCCACTAGGTGTAATCAATTCAGTTGAATAGAAATTATTTTTCCCCTAATCAACTCTCTCAATTTCTGTTATACAGTT TCTTGCTTTCTGCTAGTTTTCTTCCAACATCTGGTATCGTGAGCACGTTTGATCTCTGGGCCGTGAGGGTTCCGATCACC GTCATCTTCTCTGGCGATAGCACACGGCCATCGTCGCCGCCGTAGTTCGTTTGATTGGTCCTGTTTCTTCCGCTTGCGAT TGCGATGTCGATTACGACGTCGAACTCAGGATTCACGGCGGCTATTCCAATTCTTGATGGCAAGAACTGGAACAAGTGGA GCGTAAGGATGAAAGCTGTGATGGGGTTTCAAGAAGTGCTTGAAATCGTGGAACAAGGGCTACCAGAACTGGCTGAAAGA GCCACAAAAGCTACAAGAACGCAGCACAAGGAAAGCAAGAAGAAGGATTTCAAAGCTCTCTGCCTGTTGCATCAAGGGGT TGATGAAGCCCACTTCGAGAAGATCTCAAACGTGAAATCTTCAAAGGAAGCATGGCAGATTCTGGAAAAGTGCAACGAGG GTCAAGAACAGTTGAAGAAGGTGAGACTCCAAACCCTTAGAAGGCAGTATGAGTTGATGCAAATGGATTCCAATGAGAAG ATTGCTCAGTTCTTCAATAGGATCATTAGTCATACCAATGCTATGAAGGTTTGTGGGGAAACCATTACTGTGCAATCCAT GGTTGAAAAGATCCTGAGAACATAGTCACCACGGTTTGACCATGTTGTTGTAGCAATAGAGGAGTCCCGAAGCCTTGAAA ACATGAAGGTGGAAGACCTTCAAGGAA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0010500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCGAAGGCCATCCTCTCTCGAATCAAACCTCGTCACCGCCCGAGAGGCACCGCATTCTTGCCTCCACGCATCAAGAA CCTCGTCGTCGACGTAATCCGAATCCTCAACTCCGACCAACAATGGCAGGATTCCCTCGAATCTCGCTTCGCTGAATCCG ATATCGTTGCTTCTGATGTTGCCCATTTCGTCATAGACCGAGTCCACAACGCTGTGCTGGGTTTGAAGTTCTTTGACTGG GTTTCAACCAGACCCTTTTCTCCTTCTCTCAATGGGGTTGCGTATTCTTCTCTTCTCAAGCTCTTGGCCAGGTCCAGAGT GTTCTCGGAGATTGAGCTGGCGTTGGAAAATATGAGAGTTCAAGACTTGAAGCCTACCCGTGAAGCATTGAGCTGTTTGA TTCTTGCATATGGAGAATCTGGGTTGGTTGATAGGGCCCTCCAGCTATTCCATACAGTGCGTGAGATGCATAGTTGTTTC CCCAGTGTTGTTGCTAGCAATTCATTGCTGCAGGGTTTAGTGAAAAATGGGAAAGTTGAAATTGCACGTCAGCTGTATGA GAAAATGCTTGAAACAGATGATGGTGGTGCAGGTGCGGTTGTGGATAACTATAGCACCGCAATAGTGGTGAAGGGCCTAT GCGACTCGGGGAAAGTTGAGGAAGGCAGGAGGTTGATTAGAGTTCGATGGGGAAAGGGTTGTGTGCCGCATGTGGTGTTT TATAATTTGATTATTGATGGGTGTTGCAAGAAGGGTGATCTTCAAGGTGCAACTAGAGTTCTCAATGAATTGAAATTGAA AGGATTTTTGCCTACGTTAGAAACTTATGGGGCTTTGATTAATGGATTTTGCAAGGCAGGGGAGTTCGAAGCGGTTGATC AGCTTATGGTAGAAATTGCTTCGAGGGGATTGAAAGTGAATGTACAGGTGTTTAATACTATTATTGATGCCGAACACAAG CATGGTTTGGTAGAGAAAGCAGCTGAGACGATGAGAAGAATGTCTGAGATGGGTTGTGAGCCAGATATTGTAACTTACAA TACTCTAATTAACTTTTTATGCAGGAATGGAAGGATTAAAGAAGCTCATGAACTCTTAGACAGGGTGAAAGAAAGGGGAT TGCTTCCTAATAAGCTCAGTTATACGCCCCTCATGCATGCTTATTGCAAGCAAGGTGATTATGAGAAGGCATCAAATATG TTTTTCAAGATTGCTGAAACAGGAGATAAACCGGACTTGGTTTCTTATGGAGCTTTTATCCACGGAGTTGTTCGTTCTGG GGAAATTGATGTTGCACTGATGGTCCGGGAGAAAATGATGGAGAAGGGTGTATTTCCTGATGCTCAAATTTACAATGTTC TGATGAGTGGTCTCTGCAAGAAAGGGAGCTTTCCTGCCGCAAAACAGCTACTTTCAGAAATGCTTGATCAAAACGTTCAA CCTGATGTATATGTTTTTACAACCTTGATAGATGGGTTTATTAGAAATAATGAACTTGATGAGGCAAAAAAGCTTTTTGA AGTCTTGCTAGGAAAGGGTAAAGATCCTGACATTGTGGGGTATAATGCCATGATTAAGGGTTTCTGTAAATTTGGAAAGA TGAAAGATGCTCTATCATGCTTAAATAAGATGAAAAATGCGCATCATGCTCCAGATGAATACACTTATTCCACAATTATA GATGGATATGTAAAGCAGCATGACTTAAGTAATGCACTCAAGATGTTTGGACAGATGATGAAACAGAAATTCAAGCCAAA TGTGGTCACCTATACCTCCTTGATCAATGGATTCTGCAAGATAGCAGATATGGGCAGAGCAGAGAGAGTTTTTAGAGGGA TGCAATCTTTCAATTTGGAGCCTAATGTTTTCACATACACTATAATAATAGGAGGGTTTTTTAAGGACGGTAAACCGGAA AAAGCAACATCCTTTTTTGAGCTAATGCTGATGAACAATTGTCCTCCAAATGATGCTACATTCCATAATTTGATAAATGG TTTAACAAATATCACAAATAGTCCAGTTCTTGTTGAAAAAAATGAGTCTAACGAAATTGACAGGTCCTTGATTTTGGATT TCTTTGCAATGATGATATCAGATGGATGGGGCCCTGTGATTGCTGCTTATAATTCTGTTATTGTTTGTCTTTGTAAGCAT GGAATGGTTGGCATTGCTCAATCATTGCAAACTAAGATGCTGAGTATGGGGTTTCCTATGGATTCTGTATGTTTCACTGC TCTGCTACATGGCTTATGCCAAAAAGGACTATCAAAAGAATGGAAGAATATTATATCATGTGATCTGAATAAGATTGAAC TCCAAACTGCTGTTGCATACTCCCTGAAATTAGACAAATACATATATCAGGGAAGGCTCTCAGAGGCTTCAGTTATTTTA CAGACCTTGATTGAAGACTCTAAGTTTTCTGATCAGCAAGATGAAGATCTAAAGGTCATAATACCATAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0010500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSKAILSRIKPRHRPRGTAFLPPRIKNLVVDVIRILNSDQQWQDSLESRFAESDIVASDVAHFVIDRVHNAVLGLKFFDW VSTRPFSPSLNGVAYSSLLKLLARSRVFSEIELALENMRVQDLKPTREALSCLILAYGESGLVDRALQLFHTVREMHSCF PSVVASNSLLQGLVKNGKVEIARQLYEKMLETDDGGAGAVVDNYSTAIVVKGLCDSGKVEEGRRLIRVRWGKGCVPHVVF YNLIIDGCCKKGDLQGATRVLNELKLKGFLPTLETYGALINGFCKAGEFEAVDQLMVEIASRGLKVNVQVFNTIIDAEHK HGLVEKAAETMRRMSEMGCEPDIVTYNTLINFLCRNGRIKEAHELLDRVKERGLLPNKLSYTPLMHAYCKQGDYEKASNM FFKIAETGDKPDLVSYGAFIHGVVRSGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGSFPAAKQLLSEMLDQNVQ PDVYVFTTLIDGFIRNNELDEAKKLFEVLLGKGKDPDIVGYNAMIKGFCKFGKMKDALSCLNKMKNAHHAPDEYTYSTII DGYVKQHDLSNALKMFGQMMKQKFKPNVVTYTSLINGFCKIADMGRAERVFRGMQSFNLEPNVFTYTIIIGGFFKDGKPE KATSFFELMLMNNCPPNDATFHNLINGLTNITNSPVLVEKNESNEIDRSLILDFFAMMISDGWGPVIAAYNSVIVCLCKH GMVGIAQSLQTKMLSMGFPMDSVCFTALLHGLCQKGLSKEWKNIISCDLNKIELQTAVAYSLKLDKYIYQGRLSEASVIL QTLIEDSKFSDQQDEDLKVIIP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:1.25.40.10
67 230 164 1.0E-24
IPR011990
PANTHER
PTHR46128
89 305 217 4.8E-212 –
ProSiteProfiles
PS51375
91 125 35 8.331
IPR002885
ProSiteProfiles
PS51375
126 156 31 7.136
IPR002885
Pfam
PF01535
131 154 24 0.36
IPR002885
ProSiteProfiles
PS51375
162 192 31 9.142
IPR002885
Pfam
PF01535
166 191 26 4.7E-4
IPR002885
TIGRFAM
TIGR00756
167 191 25 7.9E-4
IPR002885
ProSiteProfiles
PS51375
202 236 35 8.692
IPR002885
Gene3D
G3DSA:1.25.40.10
231 333 103 2.3E-26
IPR011990
Pfam
PF13041
236 285 50 3.6E-13
IPR002885
ProSiteProfiles
PS51375
237 271 35 11.257
IPR002885
TIGRFAM
TIGR00756
240 272 33 3.7E-6
IPR002885
PANTHER
PTHR46128
268 451 184 4.8E-212 –
ProSiteProfiles
PS51375
272 306 35 10.304
IPR002885
TIGRFAM
TIGR00756
275 308 34 3.8E-6
IPR002885
ProSiteProfiles
PS51375
307 341 35 10.611
IPR002885
TIGRFAM
TIGR00756
310 343 34 4.4E-4
IPR002885
Pfam
PF01535
310 339 30 0.0026
IPR002885
Gene3D
G3DSA:1.25.40.10
334 404 71 8.0E-23
IPR011990
Pfam
PF13041
341 390 50 3.5E-15
IPR002885
ProSiteProfiles
PS51375
342 376 35 13.987
IPR002885
TIGRFAM
TIGR00756
344 377 34 7.6E-10
IPR002885
SUPERFAMILY
SSF81901
348 585 238 3.4E-13 –
ProSiteProfiles
PS51375
377 411 35 10.863
IPR002885
TIGRFAM
TIGR00756
380 406 27 6.5E-5
IPR002885
Gene3D
G3DSA:1.25.40.10
405 477 73 7.2E-17
IPR011990
PANTHER
PTHR46128
410 539 130 4.8E-212 –
ProSiteProfiles
PS51375
412 446 35 10.874
IPR002885
TIGRFAM
TIGR00756
414 448 35 1.0E-5
IPR002885
Pfam
PF01535
414 444 31 0.0065
IPR002885
PANTHER
PTHR46128
446 611 166 4.8E-212 –
Pfam
PF13041
446 494 49 1.6E-12
IPR002885
ProSiteProfiles
PS51375
447 481 35 12.233
IPR002885
TIGRFAM
TIGR00756
450 483 34 9.2E-8
IPR002885
Gene3D
G3DSA:1.25.40.10
478 567 90 1.6E-27
IPR011990
ProSiteProfiles
PS51375
482 516 35 11.016
IPR002885
TIGRFAM
TIGR00756
484 517 34 1.6E-4
IPR002885
PANTHER
PTHR46128
515 670 156 4.8E-212 –
Pfam
PF13041
516 565 50 1.1E-16
IPR002885
ProSiteProfiles
PS51375
517 551 35 11.696
IPR002885
TIGRFAM
TIGR00756
521 553 33 2.0E-7
IPR002885
ProSiteProfiles
PS51375
552 586 35 12.134
IPR002885
TIGRFAM
TIGR00756
554 588 35 2.5E-9
IPR002885
Gene3D
G3DSA:1.25.40.10
568 680 113 1.4E-32
IPR011990
Pfam
PF13041
586 635 50 2.9E-15
IPR002885
ProSiteProfiles
PS51375
587 621 35 12.134
IPR002885
TIGRFAM
TIGR00756
589 623 35 6.5E-8
IPR002885
ProSiteProfiles
PS51375
622 656 35 11.52
IPR002885
TIGRFAM
TIGR00756
624 657 34 6.4E-8
IPR002885
Gene3D
G3DSA:1.25.40.10
681 818 138 5.2E-13
IPR011990
PANTHER
PTHR46128
691 803 113 4.8E-212 –
ProSiteProfiles
PS51375
706 740 35 8.714
IPR002885
Pfam
PF13041
707 754 48 3.3E-8
IPR002885
ProSiteProfiles
PS51375
741 776 36 6.204
IPR002885

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0010500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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